ID JF510458; SV 1; circular; genomic DNA; STD; VRL; 2760 BP. XX AC JF510458; XX DT 29-FEB-2012 (Rel. 111, Created) DT 04-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Cotton leaf curl Burewala virus isolate In:Bathinda2:2010 segment DNA A, DE complete sequence. XX KW . XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2760 RX PUBMED; 22307170. RA Rajagopalan P.A., Naik A., Katturi P., Kurulekar M., Kankanallu R.S., RA Anandalakshmi R.; RT "Dominance of resistance-breaking cotton leaf curl Burewala virus (CLCuBuV) RT in northwestern India"; RL Arch. Virol. 157(5):855-868(2012). XX RN [2] RP 1-2760 RA Katturi P., Naik A.S., Rajagopalan P.A., Kankanallu R.S., Anandalakshmi R.; RT ; RL Submitted (08-MAR-2011) to the INSDC. RL Plant-Virus Interactions Lab, Maharashtra Hybrid Seeds Co Ltd, Jalna - RL Aurangabad road, Jalna, Maharashtra 431 203, India XX DR MD5; 9855b6b89ba6684a36037e507b841a25. DR EuropePMC; PMC5727119; 29234082. XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Cotton leaf curl Burewala virus" FT /segment="DNA A" FT /host="cotton" FT /isolate="In:Bathinda2:2010" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="15-Sep-2010" FT /note="PCR_primers=fwd_name: CBVs-C1For-2533-2569, FT rev_name: CBVs-V1Rev-528-494" FT /db_xref="taxon:620894" FT gene 132..488 FT /gene="V2" FT CDS 132..488 FT /codon_start=1 FT /gene="V2" FT /product="pre coat protein" FT /db_xref="GOA:H6BA14" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H6BA14" FT /protein_id="AFB83505.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTPFNDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSVGERAHEQ FT KAQDVQDVQKSRCS" FT gene complement(283..807) FT /gene="C5" FT CDS complement(283..807) FT /codon_start=1 FT /gene="C5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:H6BA15" FT /protein_id="AFB83506.1" FT /translation="MKILHSPPTGLIIKHIKYLSKILRFINRSTISNQEKHHTIRVILR FT LNVLIHPDLSQHINRLNTKSLTNSMGQPSTTSNITNTHYFSYMLNIKSGLKRLNLTWTF FT TSSRNIWTSVHPVHPGLSVHGPVRPRFCFGDADNGGSSTAHIWAVEVETAAYLRSGRGN FT DYICWSLRHNS" FT gene 292..1065 FT /gene="V1" FT CDS 292..1062 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:H6BA16" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H6BA16" FT /protein_id="AFB83507.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NGPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRLDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDYEP FT SRGTMKNFHRERYRLLRKGYGTVRGGVYASREQVLVKKFIRVNNCVVYSQREAGKYENQ FT GENALMLYRACTQAFNPVYATLKIRIFFKDWVPN" FT gene complement(1059..1463) FT /gene="C3" FT CDS complement(1059..1463) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:H6BA17" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H6BA17" FT /protein_id="AFB83509.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRAQVIKYLNNLGIVSINN FT VVRAIDHALWNVLQHVVFVEQSSSIKFNIY" FT gene complement(1204..1608) FT /gene="C2" FT CDS complement(1204..1608) FT /codon_start=1 FT /gene="C2" FT /product="transcription activator protein" FT /db_xref="GOA:H6BA18" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H6BA18" FT /protein_id="AFB83508.1" FT /translation="MQSSSLSKDHCTQLPIKEQHRETKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGSSKSPLFQDHQPRQPSIHDEYGYTHDQDPVQSQP FT EESVGDTQMFHSFPNLDDLTASDWSFLKGL" FT gene complement(2138..2683) FT /gene="C4" FT CDS complement(2138..2683) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H6BA19" FT /protein_id="AFB83510.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSKHPRIKNTSNSAESYTKMGALISMCSSSSRANSSARITDS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLT FT PQHLTQAVSQRLLKSLRN" XX SQ Sequence 2760 BP; 705 A; 531 C; 677 G; 847 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcctattata agtacttcgt tgctaagtat 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcggttaaa tatttgcagt tagtagagaa aactcccttc aatgatacat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagcg 420 tgggcgaacg ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acttgatatt 540 caacatatag gaaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggaaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga ttatgagccc 780 agtaggggga ctatgaagaa ttttcatcgt gagaggtata ggttgctgcg taaagggtat 840 ggaactgtca ggggtggggt atacgcgtca agggaacaag ttctcgtgaa gaaatttatt 900 agagttaata attgtgttgt gtatagccag cgggaagctg gcaagtatga gaatcagggt 960 gagaatgctt taatgttgta tagggcgtgt actcaggcct ttaacccagt gtatgctacc 1020 ttgaagatac ggatcttctt taaggattgg gtgccaaatt aataaatatt gaattttatt 1080 gaagatgatt gttctacaaa tacaacatgt tgtaatacat tccataatgc atgatcaatt 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aatcacttga 1200 gccctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagataat aagaacaccc 1500 gcattcaaga tctactctcc tcctcctgtt gcgtctcttc gtttccctgt gctgttcttt 1560 gattggaagc tgagtacagt ggtccttcga gagtgatgaa gattgcattt tttaaggccc 1620 aattctttaa tgctgtgttt ttttcctcgt tgaggaattc cgtataactg ctgttcggac 1680 caggattgca caggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcggtcgt tacttgattc ttgggaactc 1860 aggtccgaat gtccgcacca atagttatgt ggtcccaatg atctagccca cattgttctc 1920 cccgttcgac tatctccctc aattactata ctccgaggtc taaggggccg cgcagcggca 1980 tcgacaacgt tatggatggc ccaaacttca agttcttctg gaacttgatc gaaagaagaa 2040 ggagaaaaag gagaaatata gggagccggt ggctcctgaa agattctgtc tagatttgca 2100 tttaaattat gaaattgtag tacaaaatct ttgggagcta gttccttaat gactttaaga 2160 gcctctgact tactgcctgc gttaagtgct gcggcgtaag cgtcgttggc tgtctgctgt 2220 cctcctcttg ctgatcttcc atcgatctga aactctcccc actcgagagt gtccccgtcc 2280 ttgtcgatgt aggccttgac atctgagctt gatttagctc cctgaatgtt cggatggaaa 2340 tgtgctgacc tggttgggga taccaggtcg aagaatctgt tattcgtgca gacgaatttg 2400 ccctcgaact ggatgagcac atggagatga gggctcccat cttcgtgtaa ctctctgcag 2460 agtttgatgt attttttatt cgagggtgtt ttgatggctt gaatttggga aagtgcttcc 2520 tctttagtga gtgagcactg tggataagtg atgaaataat ttttggcttg tactttaaaa 2580 cgtttggggg gagccattga ctttggtcaa ttagagacaa ctgatgggct tttactctgg 2640 gaattggaga ctggatacaa tttatagtgt ctccaaatgg catattctgt aaataactag 2700 aagttcgttt gaaattcaaa ttcccctttg ggctccaaaa gcggccatcc gtataatatt 2760 //