ID JF502372; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC JF502372; XX DT 29-FEB-2012 (Rel. 111, Created) DT 04-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Cotton leaf curl Burewala virus isolate In:Haryana:2010 segment DNA A, DE complete sequence. XX KW . XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2759 RX PUBMED; 22307170. RA Rajagopalan P.A., Naik A., Katturi P., Kurulekar M., Kankanallu R.S., RA Anandalakshmi R.; RT "Dominance of resistance-breaking cotton leaf curl Burewala virus (CLCuBuV) RT in northwestern India"; RL Arch. Virol. 157(5):855-868(2012). XX RN [2] RP 1-2759 RA Katturi P., Naik A.S., Rajagopalan P.A., Kankanallu R.S., Anandalakshmi R.; RT ; RL Submitted (05-MAR-2011) to the INSDC. RL Plant-Virus Interactions Lab, Maharashtra Hybrid Seeds Co Ltd, Jalna - RL Aurangabad road, Jalna, Maharashtra 431 203, India XX DR MD5; 4e13c2bd99ea88bee806702659b143e0. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Cotton leaf curl Burewala virus" FT /segment="DNA A" FT /host="cotton" FT /isolate="In:Haryana:2010" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="15-Sep-2010" FT /note="PCR_primers=fwd_name: CBVs-C1For-2533-2569, FT rev_name: CBVs-V1Rev-528-494" FT /db_xref="taxon:620894" FT gene 132..488 FT /gene="V2" FT CDS 132..488 FT /codon_start=1 FT /gene="V2" FT /product="pre coat protein" FT /db_xref="GOA:H6B924" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H6B924" FT /protein_id="AFB83492.1" FT /translation="MWDPLLNEFPDTVHGLRCMLAVKYLQLVEKTYSPDTLGYDFLMDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT gene complement(283..807) FT /gene="C5" FT CDS complement(283..807) FT /codon_start=1 FT /gene="C5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:H6B925" FT /protein_id="AFB83498.1" FT /translation="MNILYSRRTGLIIKHIKYLSKILRFINRSTISNQEKHHTIRVILR FT LNVLIHPDLTQHINRLNTKSLTNSMGQPSTTSNITNTHYFTYMLNIMSGLKRLNLTWTF FT TSSRNIWTSVHPVHPGLSVHGPVRPCFCFGDADNGGSSTAHIWAVEVETAAYLRSGRGN FT DYICWSLRHNS" FT gene 292..1062 FT /gene="V1" FT CDS 292..1062 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:D3HIR0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D3HIR0" FT /protein_id="AFB83493.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1059..1463) FT /gene="C3" FT CDS complement(1059..1463) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:D3HIR1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D3HIR1" FT /protein_id="AFB83495.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT gene complement(1204..1608) FT /gene="C2" FT CDS complement(1204..1608) FT /codon_start=1 FT /gene="C2" FT /product="transcription activator protein" FT /db_xref="GOA:H6B928" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H6B928" FT /protein_id="AFB83494.1" FT /translation="MQSSSLSKDHCTQLPIKVQHREAKRRNRRRRVDFECGCFNYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGSSKSPLFQDHQPRQPSIHDEYGYTHDQDPVQSQP FT EESVGDTQMFHSFPNLDDLTASDWSFLKGL" FT gene complement(1505..2596) FT /gene="C1" FT CDS complement(1505..2596) FT /codon_start=1 FT /gene="C1" FT /product="replication associated protein" FT /db_xref="GOA:H6B929" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H6B929" FT /protein_id="AFB83496.1" FT /translation="MAPPKRFKVQAKNYFITYSQCSLTKDEALSQIQAINTPSNKKNIK FT LCRELHEDGDLHLHGLIQFEGKFGCTNNKFFDLVSPTGSAHFHPNIQGAKSSSDVKAYI FT DKDGNTLEWGEFQIDGSSARGGQQSANDAYAAALNAGSKSEALRVIKELVPKDFVLRFY FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD FT SRTEKKKWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYTEFLNEEKNTALKNWALKNAIFISLEGPL FT YSASNQSTAQGSEETQQEEESRL" FT gene complement(2137..2682) FT /gene="C4" FT CDS complement(2137..2682) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H6B930" FT /protein_id="AFB83497.1" FT /translation="MPFGDTINRIPSPIPRVKGHPLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKMKHFPKFKPSTHPRIKKTSNSAESYTKMGTSISMDSFSSRANSAAQITNS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLWSGESFRSMEVQQEEDSSQPTTLT FT PQHLTRAVSQRLLESLRN" XX SQ Sequence 2759 BP; 722 A; 547 C; 644 G; 846 T; 0 other; accggatggc cgcgcgattt ttttgtgggc ccaaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcctattata agtacttcgt tgctaagtat 120 gcgtttgaaa aatgtgggat cccctgttaa atgagttccc cgacaccgtt cacggtctta 180 ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgatacat 240 tgggttacga ttttttaatg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtaaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt tagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagataat taaaacaccc 1500 gcattcaaag tctactctcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtacagt ggtccttcga gagagatgaa gattgcattt tttaaggccc 1620 aattctttaa tgctgtgttt ttttcctcgt tgaggaattc cgtataactg ctgttcggac 1680 caggattgca caggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca 1860 ggtctagatg tccgcacaaa tagttatgtg gtcccaatga tctagcccac tttttcttct 1920 ccgttcgact atctccctca attactatac tccgaggtct aaggggccgc gcagcggcat 1980 cgacaacgtt atcgatggcc caaacttcaa gttcttctgg aacttgatcg aaagaagaag 2040 gagaaaaagg agaaatatag ggagccggtg gctcctgaaa gattctgtct agatttgcat 2100 ttaaattata aaatcgtagt acaaaatctt taggaactag ttccttaatg actctaagag 2160 cctctgactt actgcccgcg ttaagtgctg cggcgtaagc gtcgttggct gactgctgtc 2220 ctcctcttgc tgaacttcca tcgatctgaa actctcccca ctccagagtg ttcccgtcct 2280 tgtcgatgta ggccttgaca tctgagcttg atttagctcc ctgaatgttc ggatggaaat 2340 gtgctgaccc ggttggggat accaggtcga agaatttgtt atttgtgcag ccgaatttgc 2400 cctcgaactg aatgagtcca tggagatgga ggtccccatc ttcgtgtaac tctctgcaga 2460 gtttgatgtt ttttttattc gagggtgtgt tgatggcttg aatttgggaa agtgcttcat 2520 ctttagtgag tgagcactgt gaataagtga tgaaataatt tttggcttgt actttaaaac 2580 gtttgggggg agccattgac tttgatcaat tagagacaag ggatggcctt ttactctggg 2640 aattggagac gggatacgat ttatagtgtc tccaaatggc atattctgtg aaaaaataaa 2700 agttcgtttg aaattcaaat tcccctttgg gctccaaaag cggccatccg tataatatt 2759 //