ID JF502354; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC JF502354; XX DT 29-FEB-2012 (Rel. 111, Created) DT 04-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Cotton leaf curl Burewala virus isolate In:Abohar:2009 segment DNA A, DE complete sequence. XX KW . XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2759 RX PUBMED; 22307170. RA Rajagopalan P.A., Naik A., Katturi P., Kurulekar M., Kankanallu R.S., RA Anandalakshmi R.; RT "Dominance of resistance-breaking cotton leaf curl Burewala virus (CLCuBuV) RT in northwestern India"; RL Arch. Virol. 157(5):855-868(2012). XX RN [2] RP 1-2759 RA Naik A.S., Katturi P., Rajagopalan P.A., Kankanallu R.S., Anandalakshmi R.; RT ; RL Submitted (05-MAR-2011) to the INSDC. RL Plant-Virus Interactions Lab, Maharashtra Hybrid Seeds Co Ltd, Jalna - RL Aurangabad road, Jalna, Maharashtra 431 203, India XX DR MD5; 9de02be5022cc87190a2bf037d18c3f2. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Cotton leaf curl Burewala virus" FT /segment="DNA A" FT /host="cotton" FT /isolate="In:Abohar:2009" FT /mol_type="genomic DNA" FT /country="India" FT /collection_date="05-Sep-2009" FT /note="PCR_primers=fwd_name: CBVs-C1For_2533-2569, FT rev_name: CBVs-V1Rev_528-494" FT /db_xref="taxon:620894" FT gene 132..488 FT /gene="V2" FT CDS 132..488 FT /codon_start=1 FT /gene="V2" FT /product="pre coat protein" FT /db_xref="GOA:H6B8R3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H6B8R3" FT /protein_id="AFB83423.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFPPAFEGTPSSQPRQPICEPCCCPHCPRHQKKSMGQQAHER FT KAQDVQDVQKSRCS" FT gene complement(283..807) FT /gene="C5" FT CDS complement(283..807) FT /codon_start=1 FT /gene="C5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:H6B8R4" FT /protein_id="AFB83425.1" FT /translation="MNILHSAGTGLIIKHIKYLSKILRFINRSTISNQEKHHTIRVILR FT LNVLIHPDLTQHITRLNTKSLTNSMGQPSTPSNITNTHYSTYMLNIMREFKRLDLTWSF FT TSSTNIWTSVHPVHPGLFFHGPVDPCFSFGDADNGGSSTAHIWAVEVETTAYLRKRGGN FT DYICWSLRHNS" FT gene 292..1062 FT /gene="V1" FT CDS 292..1062 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:H6B8R5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H6B8R5" FT /protein_id="AFB83424.1" FT /translation="MSKRPADIIISPPLSKVRRRLNLDSPYVSRAAAPIVRVTKRKAWV FT NRPMKEKPRMYRMYRSPDVRRGCEGPCKVQSFEFAHDIQHIGRVMCVSDVTRGTGLTHR FT VGKRFCVKSGYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STGAVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1059..1463) FT /gene="C3" FT CDS complement(1059..1463) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:D3HIR1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D3HIR1" FT /protein_id="AFB83427.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT gene complement(1512..2597) FT /gene="C1" FT CDS complement(1512..2597) FT /codon_start=1 FT /gene="C1" FT /product="replication associated protein" FT /db_xref="GOA:H6B8R7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H6B8R7" FT /protein_id="AFB83426.1" FT /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTGSAHFHPNIQGAKSSSDVKAYI FT DKDGDPFKWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFK FT ILKANLDRFLQEPPAPYISPFSPSFFDQVPEELEKWAIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPYSYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYTEFLNEGKKHIIKELGLKKCNIHHSRRTT FT VLSFQSKYSTGKRRDATGGGE" FT gene complement(2138..2683) FT /gene="C4" FT CDS complement(2138..2683) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H6B8T7" FT /protein_id="AFB83428.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSARITDS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTPLSGESFRSMEDQQEEDSRQPTTLT FT PQHLTQAVSQRLLESLRN" XX SQ Sequence 2759 BP; 717 A; 546 C; 649 G; 847 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgggctc aaagcttaaa taattctccc gcttattata agtacttcgt tgctaagttt 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgatacat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttcccccccg ctttcgaagg tacgccgtcg tctcaacctc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa aagaaaagca 420 tgggtcaaca ggcccatgaa agaaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcgtagag gatgtgaagg accatgtaag gtccagtcgt ttgaattcgc gcatgatatt 540 cagcatatag gtagagtaat gtgtgttagt gatgttactc ggggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct ggttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtaccggcg ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagatact aagaacaccc 1500 tcattcaaga tctactctcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtacagt ggtccttcga gagtgatgaa tattgcattt tttaaggccc 1620 aattctttaa tgatgtgctt ttttccctca ttgaggaatt ccgtataact gctgttagga 1680 ccaggattgc acaggaagat tgtcggtatc ccgcctttaa tttgaactgg ctttccgtat 1740 tttgtgttgg actgccagtc tctttgggcc cccatgaact ctttaaagtg tttgaggaaa 1800 tgcgggtcga cgtcatcaat gacgttgtac caggcgtcgt tactgtatac tttgggactc 1860 aggtccagat gtccgcacaa atagctatat ggtcccaatg atctagccca catcgtcttc 1920 cccgttcgac tatctccctc aattactata ctccgaggtc taaggggccg cgcagcggca 1980 tcgacaacgt tatcgatggc ccatttttca agttcttctg gaacttgatc gaaaaaagaa 2040 ggagaaaaag gagaaatata gggagccggt ggctcctgca agaatctgtc tagatttgcc 2100 tttaaaattt tgaattgtag tacaaaatct ttaggagcta gttccttaat gactctaaga 2160 gcctctgact tactgcctgc gttaagtgct gcggcgtaag cgtcgttggc tgtctgctgt 2220 cctcctcttg ctgatcttcc atcgatctga aactctcccc acttaaaggg gtccccgtcc 2280 ttgtcgatgt aggccttgac atctgagctt gatttagctc cctgaatgtt cggatggaaa 2340 tgtgctgacc cggttgggga taccaggtcg aagaatctgt tattcgtgca gacgaatttg 2400 ccctcgaact ggatgagcac atggagatga gggctcccat cttcgtgtaa ctctctgcag 2460 agtttgatgt attttttatt cgagggtgtg ttgatggctt gaatttggga aagtgcttcc 2520 tctttagtga gtgagcactg tggataagtg atgaaataat ttttggcttg tactttaaaa 2580 cgtttggggg gagccattga ctttggtcaa ttagagacaa ctgatgggct tttactctgg 2640 gaattggaga ctggatacaa tttatagtgt ctccaaatgg catattctgt aaataactag 2700 aagttcgttt gaaattcaaa tcccctttgg gctaataaag cggccatctt tataatatt 2759 //