ID JF502222; SV 1; linear; genomic RNA; STD; VRL; 6632 BP. XX AC JF502222; XX DT 31-AUG-2011 (Rel. 109, Created) DT 31-AUG-2011 (Rel. 109, Last updated, Version 1) XX DE Cucurbit chlorotic yellows virus isolate TW segment RNA2, partial sequence. XX KW . XX OS Cucurbit chlorotic yellows virus OC Viruses; Riboviria; Closteroviridae; Crinivirus; unclassified Crinivirus. XX RN [1] RP 1-6632 RA Li J.-T., Chen T.-C.; RT "Molecular characterization of a new emerging Cucurbit chlorotic yellows RT virus in Taiwan"; RL Unpublished. XX RN [2] RP 1-6632 RA Li J.-T., Chen T.-C.; RT ; RL Submitted (07-MAR-2011) to the INSDC. RL Biotechnology, Asia University, 500, Lioufeng Rd., Wufeng, Taichung 41354, RL Taiwan XX DR MD5; 57f216ba680c71da4ab1081652b865ef. XX FH Key Location/Qualifiers FH FT source 1..6632 FT /organism="Cucurbit chlorotic yellows virus" FT /segment="RNA2" FT /host="melon" FT /isolate="TW" FT /mol_type="genomic RNA" FT /country="Taiwan:Yunlin" FT /collection_date="Jun-2009" FT /db_xref="taxon:558690" FT CDS 72..1742 FT /codon_start=1 FT /product="heat shock protein 70-like protein" FT /note="Hsp70h" FT /db_xref="GOA:D3KY91" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:D3KY91" FT /protein_id="AEN14591.1" FT /translation="MSAKAGLDFGTTFSTISAYVNGVMRVLKLNDTEFIPTCLAITITG FT DVVVGGPAQVLEEDEVANCYFYDLKRWVGVDKINFDEIKEKIKPLYVAELDGNDVKLTG FT IDRGFSCTYTVKQLILLYVETLVRLFSKVENLNIISLNVSVPADYKCKQRMFMKSVCDS FT LGFSLRRIINEPSAAAIYFVSKYAHFDSFLMYDLGGGTYDSSLIVKDGKYVTVADTEGD FT SFLGGRDIDRAISNYIKNKYNLKFPLSADFLASIKEEANSKGRDSFNVVDEKGRLITVK FT MSREELDSCIEPFSKKSINIIKNMVVRNQIRSGALFLVGGSSLLKKIQSDVAQFAKSHN FT LECIIDPDLRSAVSFGCSMSHAQEDTGNMVYIDCNSHPLMDIAFFGNPKVLVRKPMAIP FT YTYRKEEFFKSHYSTILNVYEGSDPFVLYNDWLISARMQSSLYCNIGETLEYLYKYSVD FT GILELSVKNKTTGKETVLPNTFTLTESIKKLNLNLTQLSNVDETATLIAILSHFKPDLK FT HLLTYVKTPTIFETKLNNISSAKELYKNLVDINEKFSNT" FT CDS 1743..1907 FT /codon_start=1 FT /product="6 kDa protein" FT /note="P6" FT /db_xref="UniProtKB/TrEMBL:D3KY92" FT /protein_id="AEN14592.1" FT /translation="MGLKIVLYYFNCGFSIYYCSDNRLFEGDFETIYTEDFKDLLEVVT FT NYPFVKLQW" FT CDS 1901..3454 FT /codon_start=1 FT /product="60 kDa protein" FT /note="P60" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:D3KY93" FT /protein_id="AEN14593.1" FT /translation="MVSLKESEKLKHCFQLLFKRTDVSPQLDALVEYMRNNYRTENSNV FT YKSISRKSPMSFDSQFRQVAGDIHFVEHDNKSIVKLIYIYFNKVEPNLLKKLAYQPGSL FT FVTDEWLDYLSEWEKYLDKSMNDYLNDNKSLGCLYTEDDIARHYPGSSRSRLITLYRVC FT NSQGRLIPIDEFLSGEIKGFDIPTASDAVLIGEGISNNPLFSECVQAFREYVRLMNSKA FT GQAKINVNKRFFDVYFESMSQNPEMIRVKENPLVLAKFMKEFDSLTVNSRGFADNINAI FT KTLDKDFQRFIKDVFMLNNSLDEDSLFVKMPKDSVIDILGQPISLSNYLRTSDIPPPLS FT NSSSLSDVVDTVVSEGFYSFFKKFGVTDKQLLLDALLFVFGKLTTNKNFWEKPNNVKFK FT VDSKVISFVSSDLTSHIKNCVKRFDPTYDCNNIIRQWANLRGNRAVRLFRLTGFRPGLF FT STIPGIVPWMRFDFFKLLTVQNLSHDEETSFRTLRLMTEHKSNKSSSDDCEFYKWISRS FT " FT CDS 3436..3675 FT /codon_start=1 FT /product="9 kDa protein" FT /note="P9" FT /db_xref="UniProtKB/TrEMBL:D3KY94" FT /protein_id="AEN14594.1" FT /translation="MDLSKLIEKYGEDKVEKYYSLYRNAKFSAGGTTLCVLRLINEKLM FT KFTEDNKPSGFNDVDVSEFLECVYWFSLLPKFFN" FT CDS 3806..4558 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:G3F9A4" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:G3F9A4" FT /protein_id="AEN14595.1" FT /translation="MEKTDNKQNDDLNKITEDGAEVIERYEKRESEGSKSSSNYEVRDL FT ITPEHMNPEKLGDIVVYSNRADVMTEEDELKFEQCMRDFAKKFVFKKTDSEPSPDEFMA FT FYVSLVQSWLTQSTSMKNARQRNLSNTLSVKNQKYTWRTAEFIDFVKGNLPHVPNPFRQ FT YARKHESDIEILKATGKVMSDHHLQAKHGVLSQYWALPADYVNGSLINISDDDLAANLL FT MKCQALKGTSQERKFYNVSQLAPGGCSK" FT CDS 4558..5982 FT /codon_start=1 FT /product="minor coat protein" FT /note="CPm" FT /db_xref="GOA:D3KY96" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:D3KY96" FT /protein_id="AEN14596.1" FT /translation="MESKDFYEEGDGQVITRADKYMWCQSHTMSILQVSDMSFSFLNTQ FT DVTNSKFLFQIKIGVPEGNLIYEYKFNNTHSHSFRQSGGRTWSNAFDNLGSPRILKLGV FT MNDITFKRESRDWIMSVNGFRYVKIKGIYNPNDMIISLTYPANELQLASNKVYQSDFVR FT FKSVFSEIKLNGEDFQPKTIRCYVLNLNSNKVTNLKISKPLEFLNVKSLADLNIEELNK FT DPPLPEPVKPDPPEEKVKHPDPSPEPLKPVPPVPKPSDNNDKPGESDKIKPNPTPSPVD FT IPIKPGNVSDINFSVKSNIKGIERHRLFNLEIEDIFKKCVDYYVKLGFGEDQAELIIFQ FT MGVSFCTSKNSIGDLTSHLIWEDSKGKLIRLRKSDHVKYMNSLTKFPCNVERLVLRYYS FT EKILNLLKNGSLVPASHHAKRRGVKQEFAYLVTDFFDYGKLKLSDQELQVLNSDMQYVL FT LKNKHRRSIVNVNQLY" XX SQ Sequence 6632 BP; 2244 A; 1026 C; 1325 G; 2037 T; 0 other; ttcattttgt tcaatctatc tgttgtcgta atattcttgt aaattaattt gtgtttctta 60 ttccgaataa catgtctgct aaggctggtt tggattttgg taccactttt tcgaccatta 120 gtgcgtatgt caatggtgtt atgagagttt taaaactgaa cgacactgag ttcattccta 180 cctgtttagc cataaccatt acgggagatg tggttgttgg tggtccagcc caagttcttg 240 aggaagacga ggtggctaac tgttattttt atgatttgaa gagatgggtt ggtgtagata 300 aaatcaattt tgatgaaata aaagaaaaaa taaaaccatt atatgtggcg gagttagatg 360 gtaatgatgt caaattgact ggaattgatc gtggtttctc atgtacgtac acagttaaac 420 agctgatttt attgtacgtt gagactctgg tcagactatt ttcaaaagtt gaaaatttga 480 acataattag tctaaatgtt tcagtaccag cagattataa gtgcaaacaa aggatgttta 540 tgaaatcggt gtgtgatagt ttgggttttt cactgcgaag gattatcaac gaaccgtcag 600 cagcagctat ttattttgta tcaaaatatg ctcatttcga ttctttcctc atgtacgatc 660 ttggcggtgg tacttacgat tcatctttaa ttgttaagga tgggaaatat gtcactgtcg 720 cagacactga gggagattcg ttcttaggtg gtagagatat agacagagca atttcaaatt 780 atataaaaaa taaatacaat ctcaaatttc cgttgtcagc cgatttccta gcttcaatca 840 aggaagaggc caattctaaa ggaagggatt cctttaatgt ggtggatgaa aaggggcgtt 900 tgataactgt gaaaatgtct agagaagagt tggactcgtg cattgagccg ttttcgaaga 960 agagcatcaa catcataaaa aatatggttg tgagaaacca aattaggtct ggtgctttat 1020 ttcttgtggg tggttcttca ctgttaaaga aaattcaaag cgatgtagca caatttgcga 1080 agagtcacaa tttagagtgc atcattgatc cagaccttcg atcagcagtg tcttttggtt 1140 gttctatgtc acacgctcaa gaggacacag gtaatatggt ttacatcgat tgtaattctc 1200 atccgttgat ggacatagca ttttttggta atcctaaagt cttggtccgt aaaccaatgg 1260 cgataccata cacatatagg aaagaggagt ttttcaaatc tcactatagc accattttga 1320 atgtatatga agggtctgat ccatttgtat tgtataatga ttggttgata agtgcacgta 1380 tgcagtccag tctgtattgc aatataggtg aaactttaga gtacttgtac aaatatagtg 1440 tggatggtat attagagtta tcagtaaaaa ataagaccac tggcaaggag acggttttac 1500 ctaatacttt tactttgact gaaagtatta agaaattgaa tctcaatttg actcagttat 1560 ctaatgttga tgaaacagct acgttgatag cgattttgag tcactttaaa cccgatctta 1620 agcatttact aacttacgtg aaaacaccca cgatttttga gacgaaattg aataatattt 1680 catctgcaaa agaactatat aaaaatcttg tagatataaa tgaaaaattt agcaacacat 1740 gaatgggatt aaagatagta ctttattatt ttaattgtgg tttctcaata tactattgtt 1800 cagataacag gttgtttgaa ggtgactttg aaaccatata cacagaggat ttcaaagatt 1860 tactggaggt cgtgaccaat tatccatttg ttaaattaca atggtgagtt tgaaggaaag 1920 tgaaaaatta aaacattgtt ttcaacttct tttcaaacgt acagatgtgt ctccacaact 1980 agacgcttta gttgaataca tgagaaataa ttataggaca gagaattcca acgtatataa 2040 atcaatcagt agaaagtcac caatgtcatt tgactcccaa tttaggcaag tggctggtga 2100 cattcacttt gttgaacatg acaataagag tatagtaaaa ctcatatata tctactttaa 2160 taaggtggaa ccgaacctgt taaagaaatt ggcttatcaa ccgggttcat tattcgtgac 2220 agatgaatgg ctagattatt tatctgaatg ggaaaaatat ctagacaagt ccatgaacga 2280 ctacctcaat gacaacaaat ccttagggtg tctgtacaca gaagatgaca ttgcacgaca 2340 ttaccctgga tccagtagat ctagactgat aacactttac agggtgtgta attcccaggg 2400 tcgtttaata cccatagatg agtttctatc aggagaaatt aaaggtttcg acattcccac 2460 agcatcagat gcagtattga taggtgaggg tatatcaaac aatccattat tttctgaatg 2520 tgttcaagct ttcagagagt atgtcaggtt aatgaattct aaagctggtc aagcaaaaat 2580 caatgtgaat aagagatttt ttgacgttta cttcgaatca atgtcacaga atcctgagat 2640 gatcagagta aaagagaacc cccttgtttt ggctaagttt atgaaagaat tcgattccct 2700 cacagtgaat agtcgaggtt ttgccgacaa cattaacgcc attaaaactt tggacaagga 2760 tttccaaaga ttcataaagg atgtgtttat gttgaacaat agtctggatg aagattcttt 2820 atttgtgaag atgccaaaag attcagtaat cgatatccta ggtcaaccaa tttctttatc 2880 gaactatctt aggaccagtg atataccacc accactgagt aactcatcgt cactttcaga 2940 tgttgtcgat accgtagtct cagaaggatt ttactcgttt tttaagaaat ttggtgttac 3000 agacaaacaa ctactattgg acgcgttatt gtttgtattc ggtaagctca ctaccaataa 3060 aaatttttgg gaaaaaccaa ataatgtgaa atttaaagtt gatagtaagg tcattagttt 3120 cgtctcatca gatttgacta gtcatattaa aaactgtgtt aagaggtttg atcctactta 3180 tgattgtaac aacataataa gacagtgggc taatttgaga ggtaacaggg cagtcagact 3240 gtttagattg acaggattca gacctggatt gttcagcact attcctggta ttgttccttg 3300 gatgagattc gatttcttca agttgttaac tgttcaaaac cttagtcatg atgaagagac 3360 atctttccgc acactccgcc taatgacgga gcacaagtcg aataagtcta gtagcgacga 3420 ttgtgaattt tataaatgga tctctcgaag ttaattgaaa aatatggtga ggacaaagtg 3480 gaaaagtact actcgttgta cagaaatgca aaattttcag caggcggtac tactttatgc 3540 gtcttaaggt tgatcaacga aaaattaatg aaattcaccg aggacaataa accttcagga 3600 tttaatgacg ttgacgtatc ggaatttcta gaatgtgtat attggtttag cttattacca 3660 aaatttttta actgatcagt gattatcttc aaattcaatt tgttttactg tagtctggag 3720 gtatatttcg taagtgatcg caatcaataa ggcggcgacc taatcgaaaa aataattttg 3780 aaaagttact cgatctacat taaatatgga gaagactgac aataaacaaa atgatgattt 3840 gaacaagata actgaggatg gagccgaagt tattgaaagg tatgaaaaga gagaaagcga 3900 ggggtcgaaa agttcaagca actatgaagt aagagatttg atcacacccg aacacatgaa 3960 tcctgaaaaa ttgggagaca tagttgttta ttcaaatagg gcagatgtga tgacagagga 4020 agatgaactc aaattcgaac agtgtatgag ggatttcgcg aagaagtttg tttttaagaa 4080 aactgactct gaaccatcac cagacgagtt catggctttc tatgtgagtt tggttcaaag 4140 ttggttgaca caaagcacat caatgaaaaa cgcgcggcag aggaatttgt caaacacatt 4200 atcagtaaaa aatcaaaaat acacctggag gacagctgaa ttcattgatt ttgtgaaggg 4260 aaatctacca catgttccga accctttcag acaatatgcc aggaaacacg agtcagatat 4320 tgaaattctt aaagccactg gtaaggtaat gagcgaccat catctacagg caaaacacgg 4380 tgtcttatca caatattggg ctttaccggc tgattacgtt aatggttctt tgataaacat 4440 ctcagatgat gatttggcgg caaacttgct gatgaagtgc caagctctga aaggaacaag 4500 tcaggaaaga aaattctata acgtgtctca gttggcaccg ggaggttgta gtaaataatg 4560 gagagcaaag atttttatga agaaggagat ggtcaagtga tcactagagc tgacaagtat 4620 atgtggtgtc aatcacatac tatgtcaatc ttgcaagtct cggacatgtc tttctcattt 4680 ttgaatactc aagatgtgac taattcgaag tttttgtttc aaataaaaat cggtgttcct 4740 gaaggtaatc taatatatga atacaagttc aataacacac actcacattc atttagacag 4800 tcggggggta gaacatggag taatgctttt gacaatttgg gatcaccacg cattcttaaa 4860 cttggggtca tgaatgacat aactttcaag agagaatcga gagattggat tatgtcagta 4920 aatggtttta gatatgtaaa aattaaaggt atatacaatc cgaatgatat gatcatttca 4980 ttgacatatc ctgcgaatga gttacaattg gcctctaata aagtgtatca aagtgatttc 5040 gtcaggttca aaagtgtgtt ttcagagatc aaattgaatg gtgaggactt ccaaccaaaa 5100 acaataagat gttacgtgtt gaatttaaat agcaataagg ttactaattt aaagattagc 5160 aaacctttgg aatttttaaa tgtcaagagt ttggctgatt taaacattga ggaattgaat 5220 aaagacccac ctcttccaga accagttaaa ccagacccac cggaggagaa agtgaaacat 5280 ccagatccat ctccagaacc actaaaacca gtaccaccag tccctaaacc gagtgataac 5340 aatgataaac caggggaatc tgataagatt aaaccaaacc ccactccctc accagtagat 5400 attccaatta aaccgggtaa tgtttccgac ataaatttct cagttaaatc gaatataaaa 5460 ggaatagaac gtcacaggtt attcaatctg gaaattgaag acattttcaa gaaatgtgtg 5520 gattattatg ttaaattggg gttcggagaa gaccaagctg agctgataat ctttcaaatg 5580 ggggtgtcgt tttgtactag taaaaatagt attggtgatt tgacttctca cttgatctgg 5640 gaagattcta aaggtaaact gataagactt agaaagagtg atcacgtgaa atacatgaat 5700 tcacttacaa aatttccttg taatgtggaa agattggtcc ttaggtatta cagtgagaag 5760 attttgaatc tcttgaaaaa tggatccttg gtacctgctt cccatcacgc caagagacgt 5820 ggggttaaac aagaattcgc gtatctcgtg actgatttct tcgattatgg taagctgaaa 5880 ttatcagatc aagaattgca agtgttgaat tccgacatgc aatatgtttt gttaaaaaac 5940 aaacaccgac gttctattgt aaatgtgaat caattgtatt aaaaataaaa ccatggaggt 6000 tgaataccct attcaagatt tcgatttaag taacaataac ggtatgagct tgaatgatgt 6060 aatagcaaaa aattttaata caattgtcaa catcatacag tctcatgcgc ttttcgataa 6120 aatacatcta gaaaattatc gagaattgtg taatgtttta catgttatga taaacgaaaa 6180 caataatgac attaacattt attccgagaa caatagaact ttaggtagtt ttagagacgc 6240 tggtttagac ataaataata tatcagctag gagaaataag ttgttcccaa ctttgactcc 6300 gtggcaaata agagatgttt tacaacaact tgaatctgtg ttatggtttg tcacagactt 6360 gaaaactggt ttaatggatg atttcaagat aaacaacttg ttttctatct acaaaatcaa 6420 taatgtcgga gatctaatca atagtgtaca tagttatctt aatagtcact ataattttag 6480 agacaatatc aacgcagaat tttctcttat gataagagat gatgattgtg tcgatagtgt 6540 cataaaaagt tttaaaagaa agaaattctt aaatgaaaag agtcgccaga aaatgaaaac 6600 tctcctagcc aactgtcttg tctatgagat ta 6632 //