ID JF501727; SV 1; circular; genomic DNA; STD; VRL; 2756 BP. XX AC JF501727; XX DT 05-MAR-2012 (Rel. 112, Created) DT 05-MAR-2012 (Rel. 112, Last updated, Version 1) XX DE Tomato leaf curl Palampur virus isolate IR:Jir:K1P:Squ:09, complete genome. XX KW . XX OS Tomato leaf curl Palampur virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2756 RA Heydarnejad J., Hessari M., Varsani A., Massumi H.; RT "Incidence and natural hosts of Tomato leaf curl Palampur virus in Iran"; RL Unpublished. XX RN [2] RP 1-2756 RA Heydarnejad J., Hessari M., Varsani A., Massumi H.; RT ; RL Submitted (06-MAR-2011) to the INSDC. RL Plant Protection, Shahid Bahonar University of Kerman, 22 Bahman Ave, RL Kerman, Kerman 7616914111, Iran XX DR MD5; 927836d56bde7ef0af1f77f163598c00. XX FH Key Location/Qualifiers FH FT source 1..2756 FT /organism="Tomato leaf curl Palampur virus" FT /host="Cucurbita pepo" FT /isolate="IR:Jir:K1P:Squ:09" FT /mol_type="genomic DNA" FT /country="Iran:Jiroft, Kerman" FT /collected_by="S. Alavi" FT /collection_date="2009" FT /clone="K1P" FT /db_xref="taxon:526476" FT gene 120..467 FT /gene="AV2" FT CDS 120..467 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:H8YFX0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H8YFX0" FT /protein_id="AFC37754.1" FT /translation="MWDPLVHEFPESVHGLRCMLAVKYLKEIEKTYSPDTIGYDLVRDL FT ISVVRARNYGEASSRYLHFNARIESTPSSELRQPVCCPCSCPYCPRHKGKGMGEQTHEP FT ETKILPDVSKL" FT gene 280..1050 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:H8YFX1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:H8YFX1" FT /protein_id="AFC37755.1" FT /translation="MVKRPADIYISTPASKARRRLNFDSPYAVRAAVPIVRATKAREWV FT NRPMNRKPRFYRMYRSSDVPRGCEGPCKVQSFESWHDVSHIGKVMCITDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGAPQDFGDVFNMFDNEP FT STATVKNVHRDRYQVLKKWHSTVTGGTYASKEQALVRRFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHHSNPVYATLKIRIYFYDSVTN" FT gene complement(1047..1457) FT /gene="AC3" FT CDS complement(1047..1457) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:H8YFX2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:H8YFX2" FT /protein_id="AFC37756.1" FT /translation="MITDSRTGEYITADRAESGVYIWDVPNPLYFKILKHDERPCLTNL FT DIITVQIQFNHNLRKALGLHKCFLTFQIWTGLRPQTGRFLRVFRTQVLKYLDMLGVVGI FT NNVIRAAYHVLDNVLQRTVDVWATYDVKLNTY" FT gene complement(1177..1596) FT /gene="AC2" FT CDS complement(1177..1596) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:H8YFX3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H8YFX3" FT /protein_id="AFC37757.1" FT /translation="MQSSLHSRDHSIPVEKTSLPKKKKKNIRRRRVDLQCGCSYYISIN FT CHDHGFTHRGIHHCGSSREWRVYLGRSKSPVFQNFETRRETLPHEPRHYNSPNTVQPQP FT EESTGASQVFSNIPDLDGLTPSDWAFLESFQNPGP" FT gene complement(1499..2602) FT /gene="AC1" FT CDS complement(1499..2602) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:H8YFX4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H8YFX4" FT /protein_id="AFC37758.1" FT /translation="MAPPTRFRINAKNYFLTYPKCSLTKEEALSQLQNLETPTSKKFIK FT VCRELHEDGSPHIHVLIQFEGKFQCKTNRFFDLVAPSRSAHFRPNVQGAKSASDVKKYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKEDALKVLKELAPKDYVLQFH FT NLMTNLDRIFPSRIEVYRSPFNVSSFDRVPPELVDWVSSNLRCSAARPVSTALPIRPIG FT LVLEGDSRTGKTMWARSLGLHNYLCGHLDLNPRVYSNDALYNVIDDVDPHYLKHFKEFM FT GAQRDWQSNTKYGKPIMIKGGIPTIFLCNKGPQSSYKEFLDEEKNAALKQWALKNAVFI FT TLEGPLYSGRENVAPQEEEEEHPQETS" FT gene complement(2269..2445) FT /gene="AC4" FT CDS complement(2269..2445) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H8YFX5" FT /protein_id="AFC37759.1" FT /translation="MGLRIFMFSSNLKENSSAKLTDSSTWLPQVGQHISVRTFRELNQR FT QMSRNTSTKTETY" XX SQ Sequence 2756 BP; 733 A; 590 C; 610 G; 823 T; 0 other; accgaatggc cgcggtggct tttgtgtggg tccagaacca atgaaattcg agatacatgg 60 ctaatttaat gcatggggac caataaatag acttgcgcac caagattgga tccacaaaca 120 tgtgggatcc attagtgcac gaatttcctg aaagcgttca tggtcttagg tgcatgctag 180 ctgtaaaata tctcaaagag attgaaaaga cctattctcc ggacacaatc ggatacgatc 240 ttgttcgtga cctaatctct gtcgtccgtg cgagaaacta tggtgaagcg tccagcagat 300 atctacattt caacgcccgc atcgaaagca cgccgtcgtc tgaacttcga cagcccgtat 360 gctgtccgtg cagctgtccc tattgtccgc gccacaaagg caagggaatg ggtgaacaga 420 cccatgaacc ggaaaccaag attttaccgg atgtatcgaa gctctgacgt gcccaggggc 480 tgtgaaggcc catgtaaggt tcaatctttt gagtcctggc acgatgtctc tcatattggt 540 aaagtcatgt gtattaccga cgttacccgt ggaaccggtc tcacacatcg cgttggaaaa 600 cgattttgtg tgaagtcagt ctacgttctg ggtaagatct ggatggatga gaatattaag 660 accaagaacc acacgaatag tgtgatgttt ttcttggtgc gtgatcgtcg acctacgggt 720 gcgcctcaag atttcggcga tgtgttcaat atgttcgaca atgaacctag cactgctact 780 gtgaagaatg tgcatcgtga tcgatatcaa gttctcaaaa aatggcattc gactgtgacg 840 ggaggaacat acgcttcgaa ggaacaagca ttagttagac gttttgttag ggttaataat 900 tatgttgtct ataatcaaca agaggccggc aagtatgaga atcatactga aaatgcatta 960 atgttgtata tggcctgtac tcatcattca aatcctgtgt atgcgacttt aaaaatccgg 1020 atctattttt acgattcggt gacaaattaa tatgtattaa gttttacatc atatgttgcc 1080 catacatcaa ctgttctttg caatacattg tctaatacat gataagctgc tcttattaca 1140 ttattaattc caacaacacc taacatatcc aggtacttaa ggacctgggt tctgaaaact 1200 ctcaagaaac gcccagtctg agggcgtaag cccgtccaga tctggaatgt tagaaaacac 1260 ttgtgaagcc ccagtgcttt cctcaggttg tggttgaact gtatttggac tgttataatg 1320 tcgaggttcg tgaggcaagg tctctcgtcg tgtttcaaaa ttttgaaata caggggattt 1380 ggaacgtccc agatatacac gccactctct gctcgatccg cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatgtaatac gaacaaccac actgcaaatc 1500 aactcgtctc ctgcggatgt tcttcttctt cttcttgggg agcgacgttt tctcgaccgg 1560 aatagagtgg tccctcgagt gtaatgaaga ctgcattctt caatgcccac tgtttcagtg 1620 ctgcattctt ttcttcgtct aagaattctt tatagctgct ttgtggtcct ttattgcaca 1680 agaagatagt gggaatgccg cctttaatca ttatcggctt tccgtatttt gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaaatgctt tagataatgg ggatcaacgt 1800 catcaatgac gttgtataag gcgtcgttac tgtaaaccct agggtttaga tccaagtgac 1860 cgcataagta attgtggagt cccaaactac gcgcccacat agtttttccc gtacgactat 1920 cgccctccaa tactaaccct atgggtctaa ttgggagcgc agtggaaaca ggccgcgcag 1980 cggaacacct cagatttgac gacacccaat cgacgagttc tggcggaact ctgtcgaagg 2040 acgaaacatt aaatggcgaa cgataaactt caattcgtga cggaaagatc cgatctaaat 2100 tcgtcattaa attatgaaac tgcaacacat aatcttttgg tgctaattct tttagcacct 2160 ttaatgcatc ctctttattt ccagtattaa ttgcttgtgc gtaagcatcg ttagctgttt 2220 gttgaccccc acgagcagat cgtccgtcga tctgaaaaac accccactct agtacgtctc 2280 cgtctttgtc gatgtatttc ttgacatctg acgctgattt agctccctga acgttcggac 2340 ggaaatgtgc tgaccgactt ggggcaacca agtcgaagaa tctgttagtt ttgcactgga 2400 attttccttc aaattggatg agaacatgaa tatgcggaga cccatcttcg tgaagctctc 2460 tgcagacttt tatgaatttc tttgatgtag gggtttctag gttttgtaat tgggaaagtg 2520 cctcttcttt agttagagag cactttggat atgtaaggaa atagtttttt gcatttattc 2580 tgaaacgagt tggcggagcc atagacctcg aatttccaac cggtgtctct caacttcttg 2640 tattatattg gtgtctgggg tcctatatat acataagacc cttaatggca atattgtaat 2700 tttagggata aaattacttt aattcaaact cttatagcgg ccattcgtat aatatt 2756 //