ID JF501725; SV 1; circular; genomic DNA; STD; VRL; 2756 BP. XX AC JF501725; XX DT 05-MAR-2012 (Rel. 112, Created) DT 05-MAR-2012 (Rel. 112, Last updated, Version 1) XX DE Tomato leaf curl Palampur virus isolate IR:Ira:M4P:Mel:09, complete genome. XX KW . XX OS Tomato leaf curl Palampur virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2756 RA Heydarnejad J., Hessari M., Varsani A., Massumi H.; RT "Incidence and natural hosts of Tomato leaf curl Palampur virus in Iran"; RL Unpublished. XX RN [2] RP 1-2756 RA Heydarnejad J., Hessari M., Varsani A., Massumi H.; RT ; RL Submitted (06-MAR-2011) to the INSDC. RL Plant Protection, Shahid Bahonar University of Kerman, 22 Bahman Ave, RL Kerman, Kerman 7616914111, Iran XX DR MD5; e6e3acf8cab619d93a89c716787fbb2b. XX FH Key Location/Qualifiers FH FT source 1..2756 FT /organism="Tomato leaf curl Palampur virus" FT /host="Cucumis melo" FT /isolate="IR:Ira:M4P:Mel:09" FT /mol_type="genomic DNA" FT /country="Iran:Iranshahr, Sistan-Bluchestan" FT /collected_by="F. Mangeli" FT /collection_date="2009" FT /clone="M4P" FT /db_xref="taxon:526476" FT gene 120..467 FT /gene="AV2" FT CDS 120..467 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:C0L6C0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C0L6C0" FT /protein_id="AFC37742.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKTYSPDTIGYDLVRDL FT ISVVRARNYGEASSRYLHFNARIESTPSSELRQPVCCPCSCPYCPRHKGKGMGEQTHEP FT ETKILPDVSKL" FT gene 280..1050 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:H8YFV9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:H8YFV9" FT /protein_id="AFC37743.1" FT /translation="MVKRPADIYISTPASKARRRLNFDSPYAVRAAVPIVRGTKAREWV FT NRPMNRKPRFYRMYRSSDVPRGCEGPCKCNLLSPGTMSLILVKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGAPQDFGDVFNMFDNEP FT STATVKNMHRDRYQVLKKWHATVTGGTYASKEQALVRRFIRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHYSNPVYATLKIRIYFYDSVTN" FT gene complement(1047..1457) FT /gene="AC3" FT CDS complement(1047..1457) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:C0L6C2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C0L6C2" FT /protein_id="AFC37744.1" FT /translation="MITDSRTGEYITADRAESGVYIWDVPNPLYFKILKHDERPCLTNH FT DIITVQIQFNHNLRKALGLHKCFLTFQIWTGLRPQTGRFLRVFRTQVLKYLDMLGVVGI FT NNVIRAAYHVLDNVLQRTVDVWATYDVKLNTY" FT gene complement(1177..1596) FT /gene="AC2" FT CDS complement(1177..1596) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:H8YFW1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H8YFW1" FT /protein_id="AFC37745.1" FT /translation="MQSSLHSRDHSIPVAKTSLPKKKKKNIRRRRVDLQCGCSYYISIN FT CHDHGFTHRGIHHCGSSREWRVYLGRSKSPVFQNFETRRETLPHEPRHYHSPNTVQPQP FT EESTGASQVFSNIPDLDGLTPSDWAFLESFQNPGP" FT gene complement(1499..2602) FT /gene="AC1" FT CDS complement(1499..2602) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:H8YFW2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H8YFW2" FT /protein_id="AFC37746.1" FT /translation="MAPPTRFRINAKNYFLTYPKCSLTKEEALSQLQNLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVAPSRSTHFHPNIQGAKSASDVKTYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKEDALKVLKELAPKDYVLQFH FT NLMTNLDRIFPSRIEVYRSPFNVSSFDRVPPELVDWVSSNLRCSAARPFSAALPIRPIG FT LVLEGDSRTGKTMWARSLGPHNYLCGHLDLNHRVYSNDALYNVIDDVDPHYLKHFKEFM FT GAQRDWQSNTKYGKPIMIKGGIPTIFLCNKGPQSSYKEFLDEEKNAALKQWALKNAVFI FT TLEGPLYSGRENVAPQEEEEEHPQETR" FT gene complement(2269..2445) FT /gene="AC4" FT CDS complement(2269..2445) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C6GH61" FT /protein_id="AFC37747.1" FT /translation="MGLRISMFSSNLKENSSAKITDSSTWLPQVGQHISIRTFRELNQR FT QMSKHTSTKTETF" XX SQ Sequence 2756 BP; 736 A; 586 C; 612 G; 822 T; 0 other; accgaatggc cgcggtgcct tttgtgtggg tccagaacca atgaaattcg atatacatgg 60 cttatttaat gcgtggggac caataaatag acttgcgcac caagattgga tccacaaaca 120 tgtgggatcc attattgcac gaatttcctg aaagcgttca tggtcttagg tgcatgctag 180 ctgtaaaata tctccaagag attgaaaaga cctattctcc ggacacaatc ggatacgatc 240 ttgttcgtga ccttatctct gtcgtccgtg cgagaaacta tggtgaagcg tccagcagat 300 atctacattt caacgcccgc atcgaaagca cgccgtcgtc tgaacttcga cagcccgtat 360 gctgtccgtg cagctgtccc tattgtccgc ggcacaaagg caagggaatg ggtgaacaga 420 cccatgaacc ggaaaccaag attttaccgg atgtatcgaa gctctgacgt gcccaggggc 480 tgtgaaggcc catgtaagtg caatcttttg agtccaggca cgatgtctct catattggta 540 aaggtcatgt gtattagcga cgttacacgt ggaaccggtc tcacgcatcg cgtcggaaag 600 cgattttgtg tgaagtcagt ctacgttctg ggtaagatct ggatggacga gaatattaaa 660 accaagaacc acacaaacag tgtgatgttt ttcttggtgc gtgatcgtcg acctacgggt 720 gcgcctcaag attttggcga tgtgtttaat atgttcgaca atgaacctag cactgccact 780 gtgaagaata tgcatcgtga tcgatatcaa gttctcaaaa aatggcatgc gactgtgacg 840 ggaggaacat acgcttcgaa ggaacaagca ttagttagac gttttattag ggttaataat 900 tatgttgtat ataatcaaca agaggccggc aagtatgaga atcatactga aaatgcatta 960 atgttgtata tggcctgtac tcattattca aatcctgtgt atgcgacttt aaaaatccgg 1020 atctattttt acgattcggt gacaaattaa tatgtattaa gttttacatc atatgttgcc 1080 catacatcaa ctgttctttg caatacattg tctaatacat gataagctgc tcttattaca 1140 ttatttattc caacaacacc taacatatct aggtacttaa ggacctgggt tctgaaaact 1200 ctcaagaaac gcccagtctg agggcgtaag cccgtccaga tctggaatgt tagaaaacac 1260 ttgtgaagcc ccagtgcttt cctcaggttg tggttgaact gtatttggac tgtgataatg 1320 tcgtggttcg tgaggcaagg tctctcgtcg tgtttcaaaa ttttgaaata caggggattt 1380 ggaacgtccc agatatacac gccactctct gctcgatccg cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatgtaatac gaacaaccac actgcaagtc 1500 aacgcgtctc ctgcggatgt tcttcttctt cttcttgggg agcgacgttt tcgcgaccgg 1560 aatagagtgg tccctcgagt gtaatgaaga ctgcattctt cagtgcccac tgtttcagtg 1620 ctgcattctt ttcttcgtcc aagaattctt tatagctgct ttgtggtcct ttattgcaca 1680 ggaagatagt gggaatgccg cctttaatca taatcggctt tccgtatttt gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaaatgctt tagataatgg ggatcaacgt 1800 catcaatgac gttgtataaa gcgtcgttac tgtaaaccct atggtttaga tccaagtgac 1860 cgcacaagta attgtgaggt cctaaactac gcgcccacat cgttttgccc gtacgactat 1920 cgccctccaa tactaaccct atgggtctaa tcgggagcgc agcggaaaaa ggccgcgcag 1980 cggaacacct caaatttgac gacacccaat cgacgagttc tggcggaact ctgtcgaagg 2040 acgaaacatt aaatggcgac cgataaactt ctatccgtga aggaaaaatc cgatctaaat 2100 tcgtcattaa attgtgaaac tgcaacacat aatcttttgg tgctaattct tttagcacct 2160 ttaatgcatc ctctttattt ccagtattaa ttgcttgtgc gtaagcatcg ttagctgttt 2220 gttgaccacc acgagcagat cgtccatcga tctgaaaaac accccactct agaacgtctc 2280 cgtctttgtc gatgtatgtt ttgacatctg acgctgattt agctccctga atgttcggat 2340 ggaaatgtgt tgaccgactt ggggcaacca agtcgaagaa tctgttattt ttgcactgga 2400 attttccttc aaattggatg agaacatgga tatgcggaga cccatcttcg tgaagctctc 2460 tgcagatttt tatgaatttc tttgatgtag gggtttctag gttttgtaat tgggaaagtg 2520 cctcttcttt agttagagag cactttggat atgtaaggaa atagtttttt gcatttattc 2580 tgaaacgagt tggcggagcc ataaacctcg aatttccaac cggtgtctct caacttcttg 2640 tattatattg gtgtctgggg tcctatatat acataagacc ctaaatggca atattgtaat 2700 tttagagata aaattacttt aattcaaact cttatagcgg ccattcgtat aatatt 2756 //