ID JF437885; SV 1; linear; genomic RNA; STD; VRL; 3057 BP. XX AC JF437885; XX DT 23-MAR-2011 (Rel. 108, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 5) XX DE Trailing lespedeza virus 1 isolate 06TGP01062 putative RNA-dependent RNA DE polymerases, putative movement protein 1, and putative movement protein 2 DE genes, partial cds; and putative coat protein gene, complete cds. XX KW . XX OS Trailing lespedeza virus 1 OC Viruses; Riboviria; Tombusviridae; Procedovirinae. XX RN [1] RP 1-3057 RX DOI; 10.1016/j.virusres.2011.06.023. RX PUBMED; 21762736. RA Scheets K., Blinkova O., Melcher U., Palmer M.W., Wiley G.B., Ding T., RA Roe B.A.; RT "Detection of members of the Tombusviridae in the Tallgrass Prairie RT Preserve, Osage County, Oklahoma, USA"; RL Virus Res. 160(1-2):256-263(2011). XX RN [2] RP 1-3057 RX DOI; 10.1007/s00705-015-2425-z. RX PUBMED; 25913692. RA Adams M.J., Lefkowitz E.J., King A.M., Bamford D.H., Breitbart M., RA Davison A.J., Ghabrial S.A., Gorbalenya A.E., Knowles N.J., Krell P., RA Lavigne R., Prangishvili D., Sanfacon H., Siddell S.G., Simmonds P., RA Carstens E.B.; RT "Ratification vote on taxonomic proposals to the International Committee on RT Taxonomy of Viruses (2015)"; RL Arch. Virol. 160(7):1837-1850(2015). XX RN [3] RP 1-3057 RG Plant Virus Biodiversity and Ecology Consortium RA Scheets K., Blinkova O., Melcher U., Palmer M.W., Wiley G.B., Roe B.A.; RT ; RL Submitted (01-MAR-2011) to the INSDC. RL Biochemistry & Molecular Biology, Oklahoma State University, 246 NRC, RL Stillwater, OK 74078, USA XX DR MD5; 5952d9705deaf1ef3710487c03978a13. XX FH Key Location/Qualifiers FH FT source 1..3057 FT /organism="Trailing lespedeza virus 1" FT /host="Melilotus officinalis" FT /isolate="06TGP01062" FT /mol_type="genomic RNA" FT /country="USA" FT /lat_lon="36.85 N 96.41 W" FT /isolation_source="upper leaves" FT /collection_date="02-Jun-2006" FT /db_xref="taxon:944580" FT CDS <1..>224 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase" FT /db_xref="GOA:F2YSA8" FT /db_xref="InterPro:IPR002166" FT /db_xref="UniProtKB/TrEMBL:F2YSA8" FT /protein_id="ADZ73471.1" FT /translation="TYLYGARLTNGLKIGVHRNDFPNLRRGVMERVYYVENSETKQLQS FT PITPVDGIYRSMKYIRLKLGGYIGLHSRTP" FT gap 225..1263 FT /estimated_length=1039 FT CDS <1264..1467 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase" FT /db_xref="GOA:F2YSA9" FT /db_xref="InterPro:IPR002166" FT /db_xref="UniProtKB/TrEMBL:F2YSA9" FT /protein_id="ADZ73472.1" FT /translation="KGMGGRTRGTHSISERTRYSFYLAFGITPDEQRAFEDDWERETIV FT WEWAPDGFVAANHACLQLISQS" FT CDS 1440..>1534 FT /codon_start=1 FT /product="putative movement protein 1" FT /db_xref="UniProtKB/TrEMBL:F2YSB0" FT /protein_id="ADZ73473.1" FT /translation="MSTVDKPIIEVGLPQTNIVEDTATKRGRTKNG" FT gap 1535..1652 FT /estimated_length=118 FT CDS <1653..1779 FT /codon_start=2 FT /product="putative movement protein 2" FT /db_xref="UniProtKB/TrEMBL:F2YSB1" FT /protein_id="ADZ73475.1" FT /translation="NRVIALALLGAVLTSVGNSSTVYYINNSTNENKTNHIKIET" FT CDS 1776..2816 FT /codon_start=1 FT /product="putative coat protein" FT /db_xref="GOA:F2YSB2" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:F2YSB2" FT /protein_id="ADZ73474.1" FT /translation="MNGISQNDPKVVKAAEAGIPWAIKLRSRGWRSLRTNQKXXERAFV FT GSSAPSVAIVPRVARLVRGNPQRTRRNPQQPGNAADSTTITKSDFVADVIGNTTEAGTV FT TSWLINPSNXVAFPSLLNESARWEKYKITKFSIRFSSKCSEYTDGGVVVQFASDSTDAV FT PTSKYGIMQSQCRADASAHGSVLLNCXVDTGVRFVRDSSADSGKVVDYGRVNLCAYGQK FT AADPSIIGELFFEYTIVFSEARVNRGVTQYQYLLTDSVDGPSFASVTSTSAELTFTFNL FT PGKYTFICSFTGTVSGLYAADLTYDWSVDNTTAVAGVVTVTSPGATLXWAIGATVTSLL FT WQCNIF" FT gap 2832..2947 FT /estimated_length=116 XX SQ Sequence 3057 BP; 470 A; 419 C; 467 G; 419 T; 1282 other; acttacctgt acggcgcacg attgacgaat ggcctgaaga ttggggtgca tcgcaatgat 60 tttcccaacc ttcggcgagg cgtcatggag cgcgtgtact atgtagaaaa cagtgaaaca 120 aaacaattgc agagccctat aacacccgtc gatggtattt accggagcat gaaatacatc 180 cgtctaaaac tcggaggata catcggtctt cattccagga caccnnnnnn nnnnnnnnnn 240 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 420 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 480 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 540 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 600 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 660 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 720 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 780 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 840 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 900 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 960 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260 nnnaaaggga tgggaggacg aacccggggc acacacagca taagtgaacg gacccgatac 1320 agcttctatc tggcgtttgg aatcacccct gatgaacaac gcgcatttga agacgattgg 1380 gaaagggaaa ctattgtctg ggagtgggcc cccgacggat ttgttgccgc aaaccacgca 1440 tgtctacagt tgataagcca atcatagaag taggtctacc gcaaactaac atagtagaag 1500 acacagcaac caagcgaggt aggacaaaga acggnnnnnn nnnnnnnnnn nnnnnnnnnn 1560 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nncaaccgtg taattgctct agccctcttg 1680 ggcgctgtat taactagcgt aggtaattct agcaccgtat attacattaa taatagtacc 1740 aacgagaaca agacaaacca catcaaaatt gagacatgaa cggcatttca caaaatgatc 1800 ctaaagttgt taaggctgcg gaagctggaa taccgtgggc tattaaactg cgttctcgcg 1860 gttggcgtag tctgcgtact aaccagaagt nnncagaacg cgcttttgtg gggtctagtg 1920 ctccgagtgt tgctattgtc ccacgagttg ctcgactcgt tcgaggtaac ccgcaaagga 1980 ctcgtcgcaa tcctcaacaa ccaggcaacg ctgctgacag tactacgatc acaaaatcag 2040 actttgtcgc agacgttatc ggcaatacaa cagaggcagg aaccgtcacc tcatggctga 2100 tcaatccatc aaacgnngtg gcgtttcctt cattactcaa tgagagcgcc cgctgggaga 2160 agtacaagat cacgaagttc agcattaggt tcagttcgaa atgcagcgaa tacaccgatg 2220 gaggtgtggt tgtccagttc gcgtcggata gtacagacgc cgttccaacg agcaagtacg 2280 gcattatgca gtcgcagtgt cgagcagatg caagcgccca cggctcagtg ctccttaact 2340 gtnctgttga taccggngtg cggtttgtgc gagactctag tgcggatagt gggaaagtcg 2400 ttgactacgg tcgcgtcaat ctttgtgcgt atggtcagaa agcagcggat ccttctataa 2460 taggtgagct gttctttgag tacaccatcg tgtttagtga ggcgcgggtg aatcgcggcg 2520 tcactcaata tcagtacttg ctgactgaca gtgtcgacgg gccgtcgttt gcgagcgtca 2580 cgagcacgtc tgctgagctg acattcacat tcaatctgcc tggcaaatac acgttcatat 2640 gttctttcac cggaacagtg agcgggttgt atgctgcaga tctaacatat gactggagcg 2700 tagataacac cactgcagtg gctggtgtcg taacggtaac atcgcctggc gcaacacttn 2760 gttgggccat tggagcaact gttacgagcc tgttgtggca gtgtaacatc ttttagagta 2820 gactattcgg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2880 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2940 nnnnnnnacg ctggagaacg tacctgcnta aaatcttgga gctggaccaa gtgggcttgt 3000 taggtactcc ctagactttg tcttaaaggg aaccgtgtga ctcggttctc cttgccc 3057 //