ID JF342662; SV 1; linear; genomic RNA; STD; VRL; 3954 BP. XX AC JF342662; XX DT 19-OCT-2011 (Rel. 110, Created) DT 30-NOV-2011 (Rel. 110, Last updated, Version 2) XX DE Melaka orthoreovirus segment L3, complete sequence. XX KW . XX OS Melaka orthoreovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus; OC unclassified Orthoreovirus. XX RN [1] RP 1-3954 RX DOI; 10.1099/vir.0.033498-0. RX PUBMED; 21849518. RA Voon K., Chua K.B., Yu M., Crameri G., Barr J.A., Malik Y., Wang L.F.; RT "Evolutionary relationship of the L- and M-class genome segments of RT bat-borne fusogenic orthoreoviruses in Malaysia and Australia"; RL J. Gen. Virol. 92(Pt 12):2930-2936(2011). XX RN [2] RP 1-3954 RA Voon K., Chua K.B., Crameri G., McEachern J.A., Yu M., Wang L.; RT ; RL Submitted (16-FEB-2011) to the INSDC. RL Pathology, International Medical University, Jalan 19/155B, Bukit Jalil, RL Kuala Lumpur 57000, Malaysia XX DR MD5; 473ec185aa9939eb9648bf6fceec63b0. DR EuropePMC; PMC6192116; 30332986. XX FH Key Location/Qualifiers FH FT source 1..3954 FT /organism="Melaka orthoreovirus" FT /segment="L3" FT /mol_type="genomic RNA" FT /country="Malaysia" FT /collection_date="2006" FT /db_xref="taxon:419697" FT CDS 25..3897 FT /codon_start=1 FT /product="inner core shell" FT /note="lambda A or lambda 1" FT /db_xref="GOA:G4WUE9" FT /db_xref="InterPro:IPR013087" FT /db_xref="UniProtKB/TrEMBL:G4WUE9" FT /protein_id="AEQ49370.1" FT /translation="MMRKTARRRHKDAATSDADDKSSTKNKDNVTVPKDNDPTKNKVSV FT PPAKNPAATGVPSTDGSSQVAVAVNVEKIDHSTKSTSPPPENVVGNKVDLVAPVSSEAS FT AANDKLRQDGVKHVEFTAASDGNTNVIGRTKAVDNEGAIQVVPAKSAAVASAKAMMEQK FT IPVQGLPKVTRNNGFLCTVCMAQFMNSEALAIHQTTHSIGLDSSLTSYSIATAVEDFIQ FT SWASSTSTANNKTVLTVSEVDDLMMTEGIRLVTWDSGLCSSFELLPIISSNVIQDVISY FT SWFTASYNIATPFPQASVVRIVLRTNWAAKLDSQASSRECSVYLAPPTENNIRAFTTVL FT NSGLTPDGAFNPNTFRMNVLTMCLKFVLSNLHLNRSTPFTMDLTSAAPNLSASQLRVLP FT GEDNAKWFPVMYPSRVLVPLYNKTADFVNQCIRDRIGRYDRAQIFAGAPSEWADMYETC FT DSLTLAVRELWMNRVMQMNISPSDIADAISRCSKMLLTVSAPTAPSVARLLPWRVSTQE FT RQLLQCLMYLNVGTNADFIQPILSSFAQVLARVSPLKINPTMIATAMSSIVESTTNTQS FT PAAAILSKLKPVASDFSDFRLSCAAWLFNGCVTTYLSESSFPANGGSITSIDTLVDMFI FT CLLALPLVTDPNAPCHAFMIVANAMVGYENLPMDDPNFSQQRLAAAFNNPSTWPNCFLN FT PANIDRRQCPVLRWWAETIHRAWPNPSQIQYGAPDIIGSANIFTPPDVLLLPIQNRPIR FT ITNPTWSVDNEMTIWRGAVIDLIVRIISNGRYQPNWNQSIRASMMNAMTNFRIIKTCTP FT AYLAELLPVELAAIAPTLPFQPFQVPFARLNRDAVVVHVNVSRQAPDVIAQPALNMPMT FT QQRTGVPIAVSARPLAVALLSGEYPSDPPLQTNVWYVNTLTPVYSNDGLFNNIQHAMVA FT SEAFSTLIALLAQCTDMQLPVARPLQWLRQITLAANEATVFGKLINELFLNCFDPSDKT FT VLLQPFLESDPRATQLALSYVRYDTTTEVFIPQVRPSALVEATMLVEETLSHEYNLFGI FT CRGDVIIGQHMTPAGFNPLAPPPTVVFTRGDPGVHEFGERSFAHFGLNGDDVTVLDAHG FT VRRPLLGDWVMPVQVMMLNIGIFPRLMLDRILKGKLRVRLEMGAYPYQLHYYKGRDFTD FT GFTLLEQWMSKLSPLGVPTVPFLMPESENHSISSGMATHYIWATEFNDGSLFATNTDLP FT VTVFGPDKAVPIERFRHLVDPAAQPTTNQLPFTIDLYSAMRRYYLETPPITATVTTFGN FT GLPALN" XX SQ Sequence 3954 BP; 898 A; 1071 C; 854 G; 1131 T; 0 other; gctttattcc cctaagcgcg ttccatgatg cgtaagactg caaggcgtag gcacaaagat 60 gctgctactt ctgatgctga tgataaatcc tccactaaga ataaagataa tgtgactgtg 120 cctaaggata atgaccctac gaagaataaa gtttccgtcc cccctgccaa gaatcctgcg 180 gctactggcg ttccctcaac tgatggctca tctcaggtgg ctgttgctgt taatgttgaa 240 aagattgatc attccactaa gagcacatct ccccctcccg agaatgtggt tggtaataaa 300 gtcgatttag tcgcgcctgt ctcttcagaa gcttcagctg cgaacgataa gttgcgtcaa 360 gatggcgtga agcatgttga attcaccgct gccagtgatg gtaacaccaa tgttatcggt 420 cgaaccaaag ctgttgataa tgaaggggct attcaagtgg tgcctgctaa gtcagcggcc 480 gttgcttccg ccaaggctat gatggaacag aagatccccg tgcaaggttt gcctaaggta 540 acgcgaaaca atggattcct gtgtacagtg tgcatggctc agttcatgaa ctcagaagcc 600 ctagctatac atcagaccac ccattcaata ggcctcgact catcattgac tagttactca 660 attgccacag ccgttgaaga ttttattcag tcctgggcta gctccacttc cacagcgaat 720 aacaagaccg tcctaaccgt gtcagaggtt gatgacttaa tgatgacaga aggcatccgt 780 ttagtcactt gggattcagg actgtgctcc tcttttgaac tgctcccaat tatcagttcc 840 aatgtcatcc aggatgttat atcttactcc tggttcactg cctcctacaa catagctact 900 ccttttcctc aggcttccgt cgttcgcatt gtacttcgca caaactgggc ggctaaacta 960 gactcacagg cttcatcacg tgaatgctca gtctatcttg ctccccccac tgagaataac 1020 attcgtgcat ttaccacagt gcttaactct gggttaactc ctgacggcgc gttcaaccca 1080 aatactttcc gaatgaatgt tctgaccatg tgtctgaaat tcgttttgtc aaatctgcac 1140 cttaaccgca gcactccatt cactatggac ttaacgtcgg ctgctcctaa cctgtcagct 1200 tcccagttgc gagtcctccc tggtgaagat aatgcgaaat ggttcccagt aatgtaccct 1260 tcgcgtgtgc tggtccctct gtacaataag acagctgact tcgttaatca gtgcatccgt 1320 gataggatcg gtcgatatga ccgtgcacag atttttgctg gtgccccctc tgagtgggct 1380 gacatgtacg agacctgtga ctctttgacc ctggccgttc gtgagttgtg gatgaatcgt 1440 gtcatgcaga tgaatatctc accctccgat atcgctgacg ccatttcccg ctgctccaaa 1500 atgctgctca ctgtgtccgc tcccactgcg ccatctgtcg ccagattact tccttggaga 1560 gtatccactc aggaaaggca attgctgcaa tgtctgatgt atctgaatgt tggaacgaat 1620 gctgatttca tccaacccat cctgtcatcc ttcgctcagg tcttggcacg cgtctctcct 1680 ctcaaaatta acccaacgat gatcgctact gcgatgtctt caatagtcga gagcactact 1740 aacacccaaa gtccagctgc cgccattctg tctaagctca aacctgtggc ctctgacttc 1800 tcggattttc gcctatcgtg tgcagcttgg ttattcaacg ggtgcgtgac tacttatctt 1860 tcagagtcat cttttcctgc taacggcggc tcaattacca gtattgacac tctggttgac 1920 atgtttatct gtttgctagc tctgcctcta gttactgacc ccaacgctcc atgtcatgcc 1980 ttcatgattg ttgcgaatgc catggtcggg tatgaaaatt tacccatgga tgatccgaat 2040 ttttctcagc aacgtctggc cgccgccttc aacaatccgt ctacttggcc gaactgcttc 2100 ctgaatccgg ctaacattga tcgtcgtcag tgtccagttc tacgctggtg ggctgaaacg 2160 atacatcgcg catggcctaa tccatcccaa atccaatatg gtgcgcctga catcattggt 2220 tccgccaaca ttttcactcc tccagacgtg cttctgcttc caattcagaa caggccgatc 2280 cgaatcacta acccaacttg gagtgttgat aatgagatga caatctggcg aggagcagtg 2340 attgatctga tcgtgcgcat catctccaac ggtcgttacc aacctaattg gaatcagtcc 2400 attcgggctt caatgatgaa tgctatgacg aatttcagaa ttattaagac atgcacccca 2460 gcctatcttg ccgaactact acctgttgaa ttggcagcca tagctcccac tttgcctttt 2520 cagcctttcc aagtcccttt tgccagactg aatcgagatg ctgtggtcgt tcacgtcaac 2580 gtttctcgtc aggctccaga tgttattgct cagcctgcct tgaatatgcc tatgactcag 2640 caacgcacag gtgtgccaat tgccgtgagt gctcgtcccc tcgctgtggc tctgctgtcc 2700 ggtgaatatc cttctgatcc ccccctccag actaatgtgt ggtatgttaa caccctcact 2760 ccagtttatt ctaatgacgg tctctttaac aacattcagc atgccatggt cgcttcagag 2820 gccttttcca ctttgattgc actcctcgct caatgtactg acatgcaact tcccgttgct 2880 cgtccattac aatggttacg tcagattact ctggctgcta atgaggctac ggtctttggc 2940 aagcttatta atgagctgtt tcttaattgt tttgatccct ctgataagac tgttctactg 3000 caaccctttc tggaatcaga tcctcgtgcc acccagctcg ccctgtctta tgtgcgctat 3060 gatactacca ccgaagtctt cattcctcaa gtaagacctt ctgcactggt ggaggccacc 3120 atgctagttg aggagacgtt gagtcatgag tacaatctat ttggcatctg tcgaggtgac 3180 gttattattg gtcagcacat gacccccgcc ggtttcaatc ccctggctcc tcctccaact 3240 gttgtgttca ctcgtggcga ccccggcgtg catgagttcg gcgaacgtag cttcgctcat 3300 tttgggctta acggagatga tgtgactgtt ttggacgcac acggagttcg tcgtccgctg 3360 ctaggtgact gggtcatgcc cgtgcaagtc atgatgttga atatcggcat atttcctcgc 3420 ttgatgttgg accgtatatt gaaaggaaaa ctgcgcgtcc gcctcgagat gggtgcttat 3480 ccctatcagc ttcattatta taaagggcgt gattttactg atggattcac actcctcgaa 3540 cagtggatgt ctaagctgtc ccctctcgga gtcccaactg ttccttttct catgccagag 3600 tccgaaaatc attccatcag ttcaggcatg gccactcatt atatatgggc taccgaattc 3660 aacgatggtt ccctgtttgc tactaacact gatctaccgg ttacagtttt tggaccagac 3720 aaagctgtcc ccatcgaacg cttccgacat ctggtagatc cagctgctca acctacgact 3780 aatcagctgc ctttcacgat cgatttatac agcgccatga gacgttatta tcttgagacg 3840 cctccgataa ccgcgacagt tactactttt ggtaatggct tgcctgccct gaattaggcg 3900 catcctggat agacggaggg agttcatcct agaacaccct cgggagtact catc 3954 //