ID JF342661; SV 1; linear; genomic RNA; STD; VRL; 3833 BP. XX AC JF342661; XX DT 19-OCT-2011 (Rel. 110, Created) DT 30-NOV-2011 (Rel. 110, Last updated, Version 2) XX DE Melaka orthoreovirus segment L2, complete sequence. XX KW . XX OS Melaka orthoreovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus; OC unclassified Orthoreovirus. XX RN [1] RP 1-3833 RX DOI; 10.1099/vir.0.033498-0. RX PUBMED; 21849518. RA Voon K., Chua K.B., Yu M., Crameri G., Barr J.A., Malik Y., Wang L.F.; RT "Evolutionary relationship of the L- and M-class genome segments of RT bat-borne fusogenic orthoreoviruses in Malaysia and Australia"; RL J. Gen. Virol. 92(Pt 12):2930-2936(2011). XX RN [2] RP 1-3833 RA Voon K., Chua K.B., Crameri G., McEachern J.A., Yu M., Wang L.; RT ; RL Submitted (16-FEB-2011) to the INSDC. RL Pathology, International Medical University, Jalan 19/155B, Bukit Jalil, RL Kuala Lumpur 57000, Malaysia XX DR MD5; 287d31be81e7240e6ee1c3a4bad24354. DR EuropePMC; PMC6466414; 30871070. XX FH Key Location/Qualifiers FH FT source 1..3833 FT /organism="Melaka orthoreovirus" FT /segment="L2" FT /mol_type="genomic RNA" FT /country="Malaysia" FT /collection_date="2006" FT /db_xref="taxon:419697" FT CDS 18..3797 FT /codon_start=1 FT /product="RNA polymerase" FT /note="lambda B or lambda 2" FT /db_xref="GOA:G4WUE8" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR012915" FT /db_xref="UniProtKB/TrEMBL:G4WUE8" FT /protein_id="AEQ49369.1" FT /translation="MHVKGLDDVLLEYAASISGTAPMSNSLFEKAADIINSKRRSFPYE FT LLSSIDFSVSIVIPQNIFHPPPCDDFYYIDGLNRVRRRRIIDDDDVFVPNCSIFPLLSQ FT MELLPNYGQLNPIIAANSKDGLANARILHTFYNTATNQARQVKCPLETFLLALLLSESS FT PMSADPTGLDESSSPPLSSNLPLYVLRRLSEILTNGFEDKSPWLLLDVGVAWIRSPLLS FT ASIPPLMADLTNLAIYRQICPLDDDLTSMAVQMYLQAAASGSYAHYILKTKAIFPQNTL FT HNMFRRLTGGLVPIVSWLEPRSDYKFALQGSRMVSSQDMNQTPDNTEVAEKVGHDYGCL FT DVVKRLRSKTATYTKSDHSAMTFVRDAMACTSGIFITRAPTETVMKEYTQAPSIEVPIP FT SRDWSSPIGSLRYLRPSCVLPAKFLWDTWRRAASAVADSPSTWDPLTQAIMRSQYVTSR FT GGSGAALRDALRSADVELPAFPGVSVKVSTKIYQAAQTADVPFEKLSRAVLAPLSMGLR FT NQVQRRPRTIMPMNVVQQQVAAVHTLSADYINYHLNLSTTSGSAVIEKVVPLGMYASSP FT PAQAINIDIKACDASITYSYFLSVIVGAIHSGVSGRRVTSPFMGVPPSVISLTDDTGVN FT SVMPLSGMQVMAQWLAKLYSRGFEYQVTDSFSPGNVFTHHTTTFPSGSTATSTEHTANN FT STMMECFLKEWIPRSQCSDNLRKFCSMITTRNNYVCQGDDGMLIVDGLSSGKVSGDILM FT EFVTEIRAYGKTFGWNYDVEFTGNAEYLKLYFLNGCRIPNISRHPICGKERASGDKLEM FT WPSSIDIFLGIYVNGVHDCLHWRRWLRFIWALALSYSRRVVKHGDVPRVIQYPMWSFVY FT WGIPPVSAFNSDPWMFSPYMPPGDHGMYSLLSLLRPYIIVSCDASDVDGPFGSVDHISL FT FNTDHLFQGYYMAQLPRSPVRSNRRDDPSAVRKFTHALDQYLFNSPELRARVRFGRDRW FT QKLMGDSLGRPPSLDDVAVKWFKGAQEADVPSSDEIQAMDLQLIKARQHKYTSFSSLLN FT AYLKVSWGLCESMQVVVDPRVPLCAGVNPDNSELFLKLYSVGPMMQSTKKYFNNTLFIH FT RTVSGLDVDTIDKSLLRLRSLNVPNDAIIAQLMMVGLSESDAATMAAQVRTADINAVQL FT ARVVNLSVPDTWMSLDFDHLLKYVVDLTPPSVRTLTTDIPSGHSWVRAILQFLGAGVAM FT TAVGPVRRTVLLSVHGGMSSFIRQFRKWMRASAK" XX SQ Sequence 3833 BP; 845 A; 964 C; 845 G; 1179 T; 0 other; gctttactga tcctaccatg catgtcaaag ggctagatga tgtgttactt gaatatgccg 60 cttccatttc aggtacggct cccatgtcta attcactgtt tgagaaagcc gctgacatta 120 ttaattcaaa acgcagatcc ttcccttatg aacttctatc aagtattgac ttctctgttt 180 cgatagtcat ccctcagaat atcttccacc ctcctccatg tgacgatttt tactacatcg 240 atggtttaaa cagagtcaga cgacgtcgaa tcattgatga cgatgacgtt ttcgttccta 300 actgttctat ttttccactc ctatcccaga tggagcttct gcctaactat ggtcaactta 360 accccatcat cgctgctaat tcaaaggatg gccttgctaa tgcacggatc ttgcacacat 420 tttacaatac tgccactaat caggctaggc aggtgaaatg tcctttagaa acttttcttc 480 ttgccctgct tttatcagag tcgtcaccca tgtccgcgga tcccacagga cttgatgagt 540 cttcctcgcc ccctctttcg tctaatctcc cgctctatgt cctgagacgt ctgtccgaaa 600 ttttaactaa cggttttgag gataaatctc cttggttact tttggatgtt ggtgttgcct 660 ggatccgctc tccattgctc tccgcctcca ttccacccct catggctgat ctaactaatt 720 tggctatcta tcgtcaaata tgtccattgg atgatgattt gacctctatg gctgtccaga 780 tgtatctcca agctgctgct tccggttcat acgcccatta tatattgaag actaaggcca 840 tttttccgca aaacactctc cacaatatgt tccgtcgatt gactggtgga ttagttccaa 900 tcgtatcatg gcttgaacct cgtagtgatt acaaattcgc tcttcaggga tcacgtatgg 960 ttagttcaca agatatgaat caaactcctg ataacactga ggtggcggag aaagttggtc 1020 atgattacgg ttgtctcgac gtggtgaaac gtcttagatc caaaacagcg acgtacacta 1080 aatcagacca ttccgccatg actttcgtcc gggacgctat ggcctgtaca agtggtatat 1140 tcattaccag ggcgcctact gaaaccgtga tgaaagagta tactcaggct ccatcaatcg 1200 aggtgccgat tccctcacga gattggtctt ctcctattgg atcactacgt tatctacggc 1260 cgtcgtgtgt gcttccagct aaatttctat gggatacctg gcgtcgcgct gcgtctgctg 1320 ttgccgattc gccctccact tgggatccct tgacccaagc tatcatgcgc tcacaatacg 1380 ttacctccag aggtggttct ggtgccgcac tccgcgacgc tctacgctcg gctgatgtcg 1440 aattgcccgc gtttcctggc gtctctgtca aggtatccac taagatatat caggcggctc 1500 agactgctga cgtccccttc gagaaattat cccgtgccgt ccttgcacca ttgtccatgg 1560 gtcttcgcaa tcaggtgcag cgtcgcccac gtactattat gcctatgaat gtagttcaac 1620 aacaggttgc tgccgtccat accctctccg ctgactatat caactatcac ttaaatctat 1680 cgactacctc cggcagcgct gtgattgaga aagttgtccc gttaggtatg tacgcttcct 1740 caccacccgc ccaagccatc aatatcgaca ttaaagcttg tgatgcttca atcacctact 1800 catacttcct ttcggttatt gttggtgcta ttcattctgg ggtctcaggt cgccgtgtga 1860 ctagtccatt catgggcgtc cctcctagtg tgatctccct gacggacgat actggggtga 1920 attctgtgat gcctctatct gggatgcagg ttatggctca atggttggcc aaactctatt 1980 cacgtggttt tgagtatcag gtcaccgact ccttttcccc tggaaacgtg ttcactcatc 2040 acactactac tttcccctct ggttccactg ccacttctac tgaacatact gccaacaata 2100 gtactatgat ggaatgtttc cttaaggagt ggattccgcg tagtcagtgt tctgataatc 2160 ttcggaaatt ttgttccatg ataaccacca ggaataacta cgtgtgtcaa ggggatgatg 2220 gaatgttgat tgttgatggc ctttcatctg ggaaggtgtc cggggacatt ctgatggaat 2280 ttgtcaccga aatccgcgcg tatgggaaga catttggatg gaactatgat gttgagttca 2340 ccggtaatgc cgaatatcta aagctctact tcctgaatgg ttgtcgcata cccaatattt 2400 cacgtcaccc catttgcggt aaagagcgag cttcgggtga taagctggag atgtggccgt 2460 catcaattga tatctttttg ggtatctacg tcaatggtgt ccatgattgt ttacattgga 2520 ggcgatggtt gagattcatt tgggctcttg ctctatcata ctctagaagg gtggtcaaac 2580 atggagacgt tccacgtgtt attcagtacc ctatgtggtc atttgtttat tggggaattc 2640 caccagttag tgctttcaac tctgaccctt ggatgttctc tccctatatg ccccccggag 2700 atcatggaat gtattcactc ctctccttgc ttcggccgta cattatagtc tcatgtgacg 2760 cgtctgacgt cgatggtccc tttggatctg tcgatcatat atctctcttt aatactgacc 2820 atctgtttca aggttactac atggctcagt tacctcgcag tccagttaga tctaaccgtc 2880 gcgatgaccc ttctgcagtc cgcaaattca cacacgcgct cgatcagtat ctctttaact 2940 ctccagaact tagagcaagg gttcgctttg ggcgcgatcg ttggcagaaa ttaatgggtg 3000 attcattggg tcgacctccc tctctagacg acgtagctgt gaagtggttt aagggtgctc 3060 aagaggcaga cgttccttct tctgatgaaa tccaagcaat ggaccttcag cttatcaagg 3120 ctagacagca caagtatact agcttctcga gtttgctcaa tgcgtatttg aaggtctcat 3180 ggggtctatg tgaatctatg caagtcgtgg ttgatccgcg tgtcccgtta tgtgctggag 3240 tcaatccgga taatagtgag ctgttcttaa agttgtattc cgtcggcccc atgatgcaaa 3300 gcactaagaa atatttcaac aatactctct tcatacaccg tactgtctct gggttagacg 3360 tagacaccat tgataaatcg ctgctccgtt tgcggtccct caatgtgcca aatgacgcta 3420 ttattgctca gttgatgatg gtgggtttgt cagagagtga tgctgctacg atggctgctc 3480 aggtgcgtac tgctgacatt aatgcggttc aattggctcg tgtggttaat ctaagtgtac 3540 cggatacttg gatgtctctg gattttgatc acttgctcaa atatgttgtc gatttgacac 3600 ctccctccgt tcgtacactg accactgata ttccatctgg ccactcctgg gttcgtgcca 3660 ttctgcaatt cttaggcgcc ggtgttgcga tgaccgctgt tggtccagta cgtcgaactg 3720 tgttactctc tgtccacgga ggtatgtcat cctttattcg tcagttccgc aagtggatgc 3780 gcgcatcagc caagtaatgc gtcgtgcccc gctggtgtgg atcatattca tcc 3833 //