ID JF342660; SV 1; linear; genomic RNA; STD; VRL; 3896 BP. XX AC JF342660; XX DT 19-OCT-2011 (Rel. 110, Created) DT 30-NOV-2011 (Rel. 110, Last updated, Version 2) XX DE Melaka orthoreovirus segment L1, complete sequence. XX KW . XX OS Melaka orthoreovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus; OC unclassified Orthoreovirus. XX RN [1] RP 1-3896 RX DOI; 10.1099/vir.0.033498-0. RX PUBMED; 21849518. RA Voon K., Chua K.B., Yu M., Crameri G., Barr J.A., Malik Y., Wang L.F.; RT "Evolutionary relationship of the L- and M-class genome segments of RT bat-borne fusogenic orthoreoviruses in Malaysia and Australia"; RL J. Gen. Virol. 92(Pt 12):2930-2936(2011). XX RN [2] RP 1-3896 RA Voon K., Chua K.B., Crameri G., McEachern J.A., Yu M., Wang L.; RT ; RL Submitted (16-FEB-2011) to the INSDC. RL Pathology, International Medical University, Jalan 19/155B, Bukit Jalil, RL Kuala Lumpur 57000, Malaysia XX DR MD5; c5afb6a3fbeb1d045afea9889683b650. XX FH Key Location/Qualifiers FH FT source 1..3896 FT /organism="Melaka orthoreovirus" FT /segment="L1" FT /mol_type="genomic RNA" FT /country="Malaysia" FT /collection_date="2006" FT /db_xref="taxon:419697" FT CDS 13..3861 FT /codon_start=1 FT /product="guanylytransferase" FT /note="lambda C or lambda 3" FT /db_xref="GOA:G4WUE7" FT /db_xref="InterPro:IPR010311" FT /db_xref="UniProtKB/TrEMBL:G4WUE7" FT /protein_id="AEQ49368.1" FT /translation="MAQIRGLRLAESFNVPSKSSSPSFITYDFLLSRLQCASTPWTALT FT TSSGSDITVVRLLFPLQGIQSPTLEPPVPTTFPEWRTWMQERLAVIYEDLIRRYPISEF FT HGRHVNPLICNTIVASFFSNSPYSSLLDHVMLRISPAVDILDANLLQRNHFWPLSNDLL FT MMPAGKKYWTFDGYQTSADAPCLFGKNQTPYADVIYGRDLTSLLTFVDSAPSQLTPLVH FT LDRPSYGPHVLLPTENVIPVIATSSKDCAFWLLLESCLDQLRANQSSSRSTPVTRRVHS FT YLVVRSPYFAFPESVEYALLALNNASFCGSQLTVPVPNHPTCSMVATLVSQLSDSSKAI FT TVPSPKPRSFTLYSNLKFDYPQSLTPFISISPLTFTGTLGSASILKPTAASVRWQPQFD FT DSTSSPVDLALNLMNSALTLPVTPDYGHAWTGSPLFSYAVSDRHDAAVPIDLVPDFPAD FT YFSTEQQDARARFRDYRLIADRSLHKDTANLTCVSQQQDALGNKFVFNGMSVAYMGASG FT THPDDQPSVIAPWLSGKLASVFKLSSIRQFGWDVTRGVILDVTHSIASGDFSFVYSDVD FT QVQCNSDDLVSSTRAFILQCQNLLTLVQVGGSLVVKYNFPTSRVLAWVYAELSSWFNRV FT VVMKPLLSNNLEIYIGLLQKLAIASPSFGPSSSVIVFLTKQIRRYSSLIEASVTLPDRG FT ASVTLDNPLTCLSLNFVNVTSVGSEDDLRALACFSLLSSPSTIRLSRHEYFDSFRTAVT FT SVVTPDSRRLWSRLAYVPRIFPSSLTVQSRSIAYSPPTLFKTKTSLWTLLSVYYDWVLS FT GIPGRPNLWMDLGTGPECRLLSKISEDIPVCMVDVRPSYLPMNCWKTQTDYIVKDYTDM FT QVILDYSPDYVSAILTLGAASFSSGVSLSSLVRDFLNSCKQVGATKIIFQLNSPADTRV FT DSPHRELQIDVTKQMFFFPTLGRKEPYLPLADVIQLLSQTFPGATVEIRYPEDDYSWLS FT NPLVNGLSIDTDAISKLLVLSQFFPLFIVHADVKSVTFSDMTSVGSEMSLTIHGFSSTS FT SYDVTLDGVSLLTISGAKVDSSLVSASLSVTNDDAVLRFTPASAGILRVSQTAPVVLPI FT GSTVISAPDDAITVIWPSSLDYSDAGTNVSITCNSWFTLRLFAERDGEVIRVSDDKYDI FT RPAGSNSWTLNVILDRSDAFYRFFLRDVQSAVPGQYIDFELQQLSIHVWDPSKPSFLSP FT PYNGDFVISTPGGPVQLSRPFTQIPADWKTVNVSVSVISDLPSFLVPPSEYYGIVPV" XX SQ Sequence 3896 BP; 814 A; 1027 C; 795 G; 1260 T; 0 other; gctttatcac tcatggctca gattcgaggt ttgcgtctgg cagagagctt caatgtacca 60 agtaagtcaa gttctccatc ttttattaca tatgatttcc tgctctcacg tctgcaatgc 120 gctagtacac cttggactgc actcaccacc tcttcaggtt cagatatcac ggttgtacgc 180 ttgttattcc ctttgcaggg tattcaatca cctactctgg agccgcccgt tcccacgacc 240 ttcccggaat ggagaacatg gatgcaggaa cgtctcgctg tgatttatga agatcttatt 300 cgtcgatacc ctatttcaga atttcatggt cgtcatgtca acccactaat ttgcaacacc 360 attgtcgctt ctttcttctc taatagtcca tactcttcgt tactagatca tgttatgcta 420 agaatttcac ctgctgtcga tatcctcgat gctaatcttc ttcagaggaa ccatttctgg 480 cctttgtcca atgatctgct catgatgccc gctggtaaga agtactggac ttttgatggg 540 taccaaactt cagctgatgc accttgcttg tttggcaaga accaaactcc ctacgctgat 600 gttatctatg gcagagatct aaccagttta cttacctttg tcgactcagc tccttcacag 660 ttaaccccac tcgtccatct ggatcgtccc tcatatggcc ctcacgtgct cctaccaaca 720 gagaacgtta ttccagtcat cgcaacttcg tccaaggact gtgctttctg gttactctta 780 gagtcttgtc tagaccagtt gcgcgcaaat caatcctctt ctcgaagtac gccagttact 840 cgacgtgttc attcttatct cgttgtccgt tccccatatt tcgcgttccc ggagtccgtg 900 gaatacgctc tgcttgcgct aaacaacgca tccttctgtg ggtctcagtt gactgttccg 960 gtaccgaatc accctacctg cagtatggtc gctaccctgg tatcgcagct ctcagattct 1020 tccaaggcta taacagtacc atctcccaag cctcgttcct ttaccttata ttctaatctc 1080 aagtttgact atcctcagtc actcacgccc tttatctcca tctcacctct taccttcaca 1140 ggaacccttg gttcagcgtc catattaaaa cccactgcag catccgttcg ttggcaacct 1200 cagtttgatg atagtacatc ttctcccgtc gatctagctc tgaacttgat gaattcagct 1260 ttgactttac ctgttacccc tgactacggt cacgcctgga ctggctctcc gctgttctca 1320 tacgctgtca gtgatcgtca tgatgccgcc gtaccaattg atttggtccc cgattttccc 1380 gctgactact tttctacgga gcagcaagac gcgcgcgccc gtttcaggga ttatcggcta 1440 atcgctgatc gctctcttca taaagatact gccaatctga cttgcgtctc tcaacaacaa 1500 gatgccctgg gcaataagtt cgtgttcaat ggcatgtctg tagcctacat gggtgcctca 1560 ggaactcacc ctgacgatca accttctgta attgctcctt ggttgtctgg taaactggcc 1620 tctgttttca agctttcatc aatccggcag tttggctggg atgttactag gggtgtgatt 1680 ttggacgtga ctcactctat agcttctggt gactttagct ttgtttatag tgatgtggac 1740 caagtgcaat gtaatagtga tgatttggtc agctcaacgc gtgcttttat tcttcaatgt 1800 caaaatctac tcactctggt acaagttgga ggatcgttgg ttgtcaagta caatttccct 1860 acctcacggg tcctagcttg ggtgtatgca gaactaagtt cctggtttaa ccgggttgtt 1920 gttatgaagc cactattgtc taataatctc gagatatata ttggcctgct acaaaagcta 1980 gcaatcgctt ctccttcatt cggccctagt tcgtctgtta ttgtgtttct gaccaaacag 2040 atccgccgat attcatcttt aattgaagcg tccgttactc ttcctgatcg tggagcttca 2100 gtgactctag ataatccact aacctgtctg tcccttaact tcgtcaatgt aacctcagtc 2160 ggttctgaag atgaccttcg agcgctagca tgtttctctt tgctatcctc tccctctact 2220 attcggctta gtagacatga gtactttgac agcttccgta ctgccgttac ttctgtcgtt 2280 actccagatt cgaggcgtct ttggtctcgc ctggcttatg tgccacgaat cttccctagc 2340 tcactgactg ttcagtcgcg atctatagct tacagtccac ctaccctttt taaaaccaag 2400 accagcctat ggactttact ctcagtttac tacgattggg tgctgtcagg tatccctggt 2460 cgtcctaatc tttggatgga tcttggaacg ggtccagaat gtcgtttgtt gtcaaaaatt 2520 agtgaggata tccctgtctg tatggtggat gttaggccgt catatttacc tatgaactgt 2580 tggaagactc agacggacta catagtcaag gattacacag acatgcaagt gatactggac 2640 tattcccctg actacgtctc tgctatactt acgttaggcg ctgcgtcttt ctcttcaggc 2700 gtctcacttt cttctctcgt gcgcgacttc ctgaacagtt gcaaacaggt tggggccact 2760 aagattattt tccagctgaa ttctccggct gatacccgtg tggattcacc tcatcgtgag 2820 ctccagatag atgtaaccaa acaaatgttt ttcttcccca cactagggcg taaggagccg 2880 tatctccctt tggctgatgt gattcaacta ctgtctcaga cttttcctgg tgctactgtt 2940 gaaatccggt atccggaaga tgactattca tggttgagta acccactcgt caacggtctc 3000 tccatcgata cggatgctat tagtaagctg ttagtgctgt cacaattctt cccgttattc 3060 attgttcacg cggatgttaa gtctgtgact ttttctgata tgacttccgt cggttcggag 3120 atgtctctga cgatccatgg tttctcgtcc acctcgtctt atgacgtcac gcttgacggt 3180 gttagcctgt tgactatttc aggagccaag gttgactcct ctctggtttc cgcttctctg 3240 tccgttacta atgacgatgc tgtacttcga tttacgcctg cctccgctgg cattttaagg 3300 gtctctcaga ctgctcctgt cgtccttcca attggttcca ctgtgattag tgctccagat 3360 gacgcgatta ccgttatatg gccttcttcc ctagattaca gtgacgccgg tacaaatgtc 3420 tctattactt gtaactcgtg gttcacattg cgtttatttg ctgaacggga tggtgaggtg 3480 attcgcgttt ctgacgacaa gtatgatatt cgtcctgctg gttccaactc gtggacacta 3540 aacgtgattc ttgatcgttc cgacgccttt tacagattct ttctccgaga tgtccagagt 3600 gctgttcctg gccagtacat tgatttcgaa ttgcagcaac tgtccattca tgtgtgggat 3660 ccttcaaagc catccttttt atctccccct tacaatggcg attttgttat ttcgactcct 3720 ggcggcccag tgcagttatc ccgaccattc actcaaattc ctgctgattg gaagacagtt 3780 aatgtttcgg tctctgttat ctctgacctt ccaagcttcc tggtgcctcc ttcggaatac 3840 tacggcattg ttccagtcta gacgctgacc cctgagaagg gtgatatata ttcatc 3896 //