ID   JF279608; SV 1; linear; genomic RNA; STD; VRL; 666 BP.
XX
AC   JF279608;
XX
DT   26-JUL-2011 (Rel. 109, Created)
DT   26-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate Pun-In capsid protein (CP) gene, complete
DE   cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-666
RA   Geetanjali S., Mandal B., Kumar R., Srivastava P.S.;
RT   "Characterisation of two distinct Indian strains of Cucumber mosaic virus
RT   infecting tomato and subgroup-specific diagnosis based on complete RNA-3
RT   genome";
RL   Unpublished.
XX
RN   [2]
RP   1-666
RA   Mandal B., Geetanjali S.;
RT   ;
RL   Submitted (01-FEB-2011) to the INSDC.
RL   Plant Pathology, Indian Agricultural Research Institute, Pusa Campus, New
RL   Delhi, Delhi 110012, India
XX
DR   MD5; 101b8a214982de345b44847f621e6990.
DR   EuropePMC; PMC3550734; 23637513.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..666
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA-3"
FT                   /host="cucumber"
FT                   /isolate="Pun-In"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Pune"
FT                   /isolation_source="cucumber leaves showing mosaic symptoms"
FT                   /collection_date="2007"
FT                   /note="subgroup-IB"
FT                   /db_xref="taxon:12305"
FT   gene            10..666
FT                   /gene="CP"
FT   CDS             10..666
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q9WAB3"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WAB3"
FT                   /protein_id="AEK69526.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 666 BP; 150 A; 176 C; 160 G; 180 T; 0 other;
     agtcgagtca tggacaaatc tgaatcaacc agtgccggtc gtaatcgtcg acgtcgtccg        60
     cgtcgtggtt cccgctccgc ttcctcctcc gcggatgcta actttagagt cttgtcgcag       120
     cagctttcgc gacttaacaa gacgttagca gctggtcgtc caactattaa ccacccaacc       180
     tttgtgggta gtgaacgctg taaacctggg tacacgttca catctattac cctgaagccg       240
     ccaaaaatag accgcgggtc ttattatggt aaaaggttgt tgctacctga ttcagtcacg       300
     gagttcgata agaagcttgt ttcgcgcatt caaattcgag ttaatccttt gccgaaattt       360
     gattctaccg tgtgggtgac agtccgtaaa gttcctgcct cctcggactt atccgttgcc       420
     gctatctctg ctatgtttgc ggacggagcc tcaccggtac tggtttatca gtatgctgca       480
     tccggcgttc aagccaacaa caaattgttg tacgatcttt cggcgatgcg cgctgatatt       540
     ggcgacatga gaaagtacgc cgtcctcgtg tattcaaaag acgatgcgct cgagacggac       600
     gagttggtac ttcatgttga catcgagcac caacgcattc ccacatctgg ggtgctccca       660
     gtctaa                                                                  666
//