ID   JF279607; SV 1; linear; genomic RNA; STD; VRL; 665 BP.
XX
AC   JF279607;
XX
DT   26-JUL-2011 (Rel. 109, Created)
DT   26-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate Ban-In capsid protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-665
RA   Geetanjali S., Mandal B., Kumar R., Srivastava P.S.;
RT   "Characterisation of two distinct Indian strains of Cucumber mosaic virus
RT   infecting tomato and subgroup-specific diagnosis based on complete RNA-3
RT   genome";
RL   Unpublished.
XX
RN   [2]
RP   1-665
RA   Mandal B., Geetanjali S.;
RT   ;
RL   Submitted (01-FEB-2011) to the INSDC.
RL   Plant Pathology, Indian Agricultural Research Institute, Pusa Campus, New
RL   Delhi, Delhi 110012, India
XX
DR   MD5; e8fb3eecf86880246b79bc0f1ada0c24.
DR   EuropePMC; PMC3550734; 23637513.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..665
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA-3"
FT                   /host="tobacco"
FT                   /isolate="Ban-In"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Bangalore"
FT                   /isolation_source="tobacco leaves showing mottling
FT                   symptoms"
FT                   /collection_date="2007"
FT                   /note="subgroup-IB"
FT                   /db_xref="taxon:12305"
FT   gene            10..>665
FT                   /gene="CP"
FT   CDS             10..>665
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /note="coat protein"
FT                   /db_xref="GOA:G0ZI05"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:G0ZI05"
FT                   /protein_id="AEK69525.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDESVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 665 BP; 149 A; 177 C; 160 G; 179 T; 0 other;
     agtcgagtca tggacaaatc tgaatcaacc agtgccggtc gtaatcgtcg acgtcgtccg        60
     cgtcgtggtt cccgctccgc ttcctcctcc gcggatgcta actttagagt cttgtcgcag       120
     cagctttcgc gacttaacaa gacgttagca gctggtcgtc caactattaa ccacccaacc       180
     tttgtgggta gtgaacgctg taaacctggg tacacgttca catctattac cctgaagccg       240
     ccaaaaatag accgcgggtc ttattatggt aaaaggttgt tgctacctga ttcagtcacg       300
     gagttcgata agaagcttgt ttcgcgcatt caaattcgag ttaatccttt gccgaaattt       360
     gattctaccg tgtgggtgac agtccgtaaa gttcctgcct cctcggactt atccgttgcc       420
     gctatctctg ctatgtttgc ggacggagcc tcaccggtac tggtttatca gtatgctgca       480
     tccggcgttc aagccaacaa caaattgttg tacgatcttt cggcgatgcg cgctgatatt       540
     ggcgacatga gaaagtacgc cgtcctcgtg tattcaaaag acgatgcgct cgagacggac       600
     gagtcggtac ttcatgttga catcgagcac caacgcattc ccacatctgg ggtgctccca       660
     gtcta                                                                   665
//