ID J04374; SV 1; linear; genomic RNA; STD; VRL; 6331 BP. XX AC J04374; XX DT 26-MAY-1990 (Rel. 24, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Eggplant mosaic virus genome. XX KW replicase protein; virion protein. XX OS Eggplant mosaic virus OC Viruses; Riboviria; Tymovirales; Tymoviridae; Tymovirus. XX RN [1] RP 1-6331 RX DOI; 10.1016/0042-6822(89)90197-9. RX PUBMED; 2800336. RA Osorio-Keese M.E., Keese P., Gibbs A.; RT "Nucleotide sequence of the genome of eggplant mosaic tymovirus"; RL Virology 172(2):547-554(1989). XX DR MD5; 676dc28d5bc72a5ff5f98fb828c25b07. DR EuropePMC; PMC112128; 10864632. DR RFAM; RF00233; Tymo_tRNA-like. XX FH Key Location/Qualifiers FH FT source 1..6331 FT /organism="Eggplant mosaic virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:12151" FT CDS 102..2051 FT /codon_start=1 FT /note="overlapping out-of-phase protein" FT /db_xref="InterPro:IPR004935" FT /db_xref="UniProtKB/Swiss-Prot:P20129" FT /protein_id="AAA43038.1" FT /translation="MPHGLSVCSRSSQLNYSQRCFYKSNSELRRGTSPRLSIPISLAPS FT QRSRSPPSILGHPELRPRSHSPPPPNPQNSRDFSPVQSLACSRSPAFNCDVHETVQVSK FT TCGSKPKIPRVDQLSTHCRRHHSLPLHLTHFSKQFNLLHARCSDVLFSSSDRRSLHSVS FT RTRDPVLQSHSASRVSFHRSLSLPRDLHLQDLRSDSPLHPGESPLRLVQSAPPSPILAE FT DFLHPLAFPRFVCDQAGILGPSPLHIDPARPTTKALSLCTPPRPAKSTSPCNNSQLPKP FT TAASDKPAILPTAAASTQPGLLPNSRLRRTATSHLSAPTSPPPASANKRLQRSLHLHSR FT SPHSSHFRPSRICANSKQQTRARLGHSKRVGQSADLVCQCPPPPPSMLPLLLLPRGKVK FT APLRPTLASLSFGSHPIPYHVTSSPPLIQFQHPFPPPSATFSVSPLGVLTTAFALNPTQ FT SAERSCDPESPTPTLGHKTTSLSRLPLPPPHSPHSAQDRASALATDVSNSETKNCPSPT FT VPPPFLPNHLHPLLPGTDPPTTPRQLSPSPSSLSLRTFLDSAVISCDSSPVLPPSPSPS FT SHSSSSFQSCTSPPRFPCYPPPPSALDLLFSSTPGTDPFPPPDTPPPHKRTIALERLRL FT RQCATPFHSCDDVC" FT CDS 109..5628 FT /codon_start=1 FT /note="replicase protein (putative); putative" FT /db_xref="GOA:P20126" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008043" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:P20126" FT /protein_id="AAA43039.1" FT /translation="MAFQSALEALNSTTHRDASTNPILNSVVEPLRDSLSLYPWLLPKE FT AVPHLLSWGIPNSGLGVTPHPHPIHKTVETFLLFNHWHALARLPSTVMFMKPSKFQKLA FT ALNPKFQELINFRLTAADTTRYPSTSLTFPSNSICFMHDALMYFSPAQIVDLFTQSPAL FT ETLYCSLIVPPESHFTDLSLFPEIYTYKISGQTLHYIPENHHSGSYNQPLQAPSWLKIS FT SILSPSLALSVTKLESWGPVHSILIQRGLPPKPSLSARPPVLPNQPPRATTPNSQNQLL FT HQTSQLFFQLQQPQLSLVSFRIPDCVELPQATFLRQPLRHRLVPTSVYNALFTYTRAVR FT TLRTSDPAGFVRTQSNKPEHAWVTPNAWDNLQTLSVNAPHRPQVCYHFFSSPVARLKLH FT FAQHWRAYLLALTPFLTTSPLLLPLFNFNTPFPLPRLLSLFRRSVSSPRLLHSILPSQL FT RGAAIPNRPLPLWVTKLHHFLDSHSLLPTPPIRPRIELQRLPLMSLIPKPKIVLPLLSL FT LLSSPTIYIHFFQAQTPQQLHDNYHLHLHPSRFELSWTLQSYHVTQAQSFLPLLLPAPT FT QAQASNPAPRPPAFHAIPLPPQPSTSSSPPLQEPTLSPHLIHPPLTREPSPLNGCACDS FT ALLPSTAAMTSAEHPTPLNPPTPSPTPDVPPPDSPGNPSLLKQVPPEANLHPIHNPDLP FT SSTTLPSGALTLVPAKTPSIYANPTPPSSHPFTPLADDPTAVGPCLPFHVLHPADYFPL FT SAEFLTRTRHVPPSSLSHPKLNCLLTCFSELSGHSESDLWLSLQSILPDSQLQNPEVST FT LGLSTDILTALCFIYHSSVTLHAPSGVYHYGIASSSTVYVIHYQPGPPPHFSLSPRLAA FT SAPRCNPTNSRLVRQALRFKLNGEFLPFTQAYAHESSITHAKNLISNMKNGFDGIMSSL FT TDSSKGPSPREKLTTLDSLIDVAAPREVSLIHIAGFAGCGKTHPIQKLLQTSPFHDFRI FT SCPTNELRSEWKRDMQPTAENVWRFSTWESSLLKHSEILVIDEIYKLPRGYLDLSILAD FT PTLSLVIILGDPLQGEYHSTSPHSSNHFLPSEVHRFKSYIDCYCFWSHRIPKQIASLFG FT VVCHNTNEGFVRALTSHPPNSKNLTNATNTALSLQQMGHHAITISARRVTFTEAHTILL FT DRHTNLLSPNNCLVALTRSRTGVYFVGNLHLASNSFGTNYMFSQALCQGTIDLNNVFPH FT IMPHLPKMYEPIRSRSNRFVSGSLNFRPTTNSRLLSSLTKPTHLPPHIPTNHSLDVLVS FT NPVLLGETLDPRLEVLHLPPTRLPLHLDLLPTVPSSSSFSSVDHLFPTPISPAICGYTF FT ENLAAFFLPAHDPDLKEVLINDQKSNQFPYLDAPFELSCQPSSLLAPIHKPASDPTLLP FT GSIKKRLRFRASSSPYSITPSDQLLGQHLFSSLCLAYGRNPNSVLPFQPELFSECICIN FT DYAQLSSKTQATIVANHQRSDPDWRLTAVRIFAKAQHKVNDASIFSGWKACQTLALMHG FT YIILVLGPVKKYQRIFDSKDRPPHIYYHCGKTPSQLSQWCQTHLSGSSYIANDYTAFDQ FT SQHGEAVVLECLKMRRLSIPDSLIQLHSHLKCSVDTQFGPLTCMRLTGEPGTYDDNSDY FT NLAVIYSQYSLNGHPILISGDDSVLCGTPPPSPLWPTLKKMLHLRFKIERTSHPLFCGY FT YVSPHGAARNPYALFAKLMICVDDKSLHDKKLSYLSEFSTGHLAGDLVTSILPSHLLPY FT QSAVHDFFCRNCTPAEKILLSLDPIPESKILQLILKVRWASQAFFSYLPQKARELLVAR FT SSLPSLYSNPKVSQLESELLPFSQ" FT CDS 5633..6199 FT /codon_start=1 FT /note="virion protein" FT /db_xref="GOA:P20123" FT /db_xref="InterPro:IPR000574" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/Swiss-Prot:P20123" FT /protein_id="AAA43040.1" FT /translation="MEDTAIIRSPQPSINAPGFHLPPTDSQQSSAIELPFQFQATTFGA FT TETAAQISLASANAITKLASLYRHVRLTQCAATITPTAAAIANPLTVNIVWVSDNSTAK FT PTEILNVFGGSSYTFGGALNATKPLTIPLPMNSVNCMLKDSVLYTDCPKLLAYSAAPSS FT PSKTPTATIQIHGKLRLSSPLLQAN" XX SQ Sequence 6331 BP; 1337 A; 2441 C; 987 G; 1566 T; 0 other; gtaatcagaa ccagaactaa ccctgttatc agccttagtt cttttacttt cctgtccaaa 60 tttctgaacc gactagtgcc ttcctagaac ccactacgtc aatgcctcat ggcctttcag 120 tctgctctcg aagctctcaa ctcaactact cacagagatg cttctacaaa tccaattctg 180 aactccgtcg tggaacctct ccgcgactct ctatccctat atccctggct ccttcccaaa 240 gaagccgttc cccaccttct atcctggggc atcccgaact ccggcctcgg agtcactccc 300 cacccccacc caatccacaa aacagtcgag acttttctcc tgttcaatca ctggcatgct 360 ctcgctcgcc tgccttcaac tgtgatgttc atgaaaccgt ccaagtttca aaaacttgcg 420 gctctaaacc caaaattcca agagttgatc aactttcgac tcactgccgc cgacaccact 480 cgctacccct ccacctcact cacttttcca agcaattcaa tttgcttcat gcacgatgct 540 ctgatgtact tttctccagc tcagatcgtc gatctcttca ctcagtctcc cgcactcgag 600 accctgtact gcagtctcat agtgcctcca gagtctcatt tcacagatct ctctctcttc 660 cccgagatct acacttacaa gatctcaggt cagactctcc actacatccc ggagaatcac 720 cactccggct cgtacaatca gcccctccaa gccccatctt ggctgaagat ttcctccatc 780 ctctcgcctt ccctcgcttt gtctgtgacc aagctggaat cttggggccc agtccactcc 840 atattgatcc agcgaggcct accaccaaag ccctctctct ctgcacgccc ccccgtcctg 900 ccaaatcaac ctccccgtgc aacaactccc aactcccaaa accaactgct gcatcagaca 960 agccagctat tcttccaact gcagcagcct caactcagcc tggtctcctt ccgaattcca 1020 gactgcgtag aactgccaca agccaccttt ctgcgccaac ctctccgcca ccggctagtg 1080 ccaacaagcg tttacaacgc tctcttcacc tacactcgcg cagtccgcac tcttcgcact 1140 tccgacccag ccggatttgt gcgaactcaa agcaacaaac ccgagcacgc ttgggtcact 1200 ccaaacgcgt gggacaatct gcagaccttg tctgtcaatg ccccccaccg cccccaagta 1260 tgctaccact tcttctcctc ccccgtggca aggttaaagc tccacttcgc ccaacactgg 1320 cgagcctatc ttttggctct caccccattc cttaccacgt cacctcttct cctcccctta 1380 ttcaatttca acaccccttt ccccctccct cggctacttt ctctgtttcg ccgctcggtg 1440 tcctcaccac ggcttttgca ctcaatccta cccagtcagc tgagaggagc tgcgatcccg 1500 aatcgcccac tcccactctg ggtcacaaaa ctacatcact ttctcgactc ccactccctc 1560 ctccccactc cccccattcg gcccaggata gagcttcagc gcttgccact gatgtctcta 1620 attccgaaac caaaaattgt ccttccccta ctgtccctcc tcctttcctc cccaaccatc 1680 tacatccact tcttccaggc acagaccccc caacaactcc acgacaatta tcaccttcac 1740 cttcatccct ctcgcttcga actttcctgg actctgcagt catatcatgt gactcaagcc 1800 cagtccttcc tccctctcct tctcccagct cccactcaag ctcaagcttc caatcctgca 1860 cctcgccccc ccgctttcca tgctatcccc ctcccccctc agccctcgac ctcctcttct 1920 cctccactcc aggaaccgac cctttccccc cacctgatac acccccccct cacaagagaa 1980 ccatcgccct tgaacggctg cgcctgcgac agtgcgctac tcccttccac agctgcgatg 2040 acgtctgctg aacatcccac tccactcaac ccccccacac ctagcccaac accagacgtc 2100 cctcctcccg actcacccgg taacccatca cttttgaagc aagtccctcc cgaagcgaac 2160 ttgcatccta tccacaaccc agacctcccc tcttccacca ctcttccttc tggggccctg 2220 acactggtcc cagccaaaac tccttccatc tacgccaatc ccaccccccc cagttcccat 2280 ccgttcaccc cactggctga tgaccccact gctgtgggtc cttgcctacc gttccacgtt 2340 ctccacccgg ctgactactt tcctctttca gccgagtttc tcacacggac ccggcatgtc 2400 cccccctctt ctctctcaca tccaaaactc aattgcctac tcacctgctt ttctgaactt 2460 tcaggacact ctgagtcaga tctttggttg tccctgcaat caatacttcc tgactcccaa 2520 ctccaaaatc ctgaagtctc gacacttggc ctgtccactg acattctcac agctctctgc 2580 ttcatctacc attcatctgt gactctccat gccccctcag gagtttatca ctacggcata 2640 gcctcctctt ctaccgtcta tgtcatccac tatcaaccag gccctcctcc tcatttttct 2700 ctctccccta gacttgccgc ttctgctcct cgctgcaacc ccaccaacag cagattggtc 2760 agacaagctc tgcggtttaa attgaacggc gagtttctcc ccttcaccca ggcttacgcg 2820 catgaatctt ccatcaccca tgccaaaaac ctcatctcca acatgaagaa tggttttgat 2880 ggaatcatgt cttctctcac tgactcctct aagggtccct ccccccgtga aaaactgacc 2940 actctcgact ctctcataga tgtcgctgcc cctcgcgaag tttctctcat ccacatcgcc 3000 ggcttcgcag gctgcggcaa gacccacccc atccaaaaac tcctccaaac ttcccctttt 3060 cacgacttcc gaatctcatg ccccactaat gaactccgat ccgaatggaa gcgtgatatg 3120 caaccaacag ctgaaaatgt ttggaggttc tccacatggg aatccagcct gctcaaacat 3180 tccgagatcc tcgtaatcga cgagatttac aagctccctc gtggctacct agatctctcc 3240 atccttgctg atccaactct ctccttggtc atcatccttg gtgaccctct ccaaggagag 3300 tatcactcga cctctcctca cagctccaat cactttcttc caagtgaggt ccaccgcttc 3360 aagtcttaca tcgactgcta ctgtttttgg tcccaccgca ttccaaagca gatagcatcc 3420 ttgttcggcg tagtatgcca caacacgaac gaaggtttcg tgagagccct cacatctcat 3480 ccccccaatt ccaaaaacct caccaatgcg accaacactg ctctcagtct ccaacagatg 3540 ggccaccacg ctatcaccat cagcgccaga agggtcacct tcaccgaggc ccatacaatt 3600 ctgcttgatc gtcataccaa ccttctctcc cccaacaact gtcttgttgc cctcacccgc 3660 agccgcactg gcgtctactt cgtcggcaat ctgcacctgg catcaaacag ctttggcaca 3720 aactacatgt tctctcaagc tctctgccaa ggcacaatcg acctaaacaa cgtgttcccc 3780 cacatcatgc ctcacctccc gaaaatgtat gaacccatcc gctcccggtc caaccgtttt 3840 gtgtctgggt ccctcaattt tcgaccaacc accaattccc gcctcctttc cagtctcact 3900 aagccaaccc acctcccccc tcacatccct accaaccact ccctggatgt cctagtttcc 3960 aaccctgtgc tccttggtga gaccctcgac cctcgattgg aggtcctcca cctcccccca 4020 actcgcctcc cattgcatct ggacctcctg cccacagtac cttcctcttc cagcttctcc 4080 tcagtcgacc atcttttccc aacccccatc tcccccgcta tctgcggcta caccttcgaa 4140 aatttggccg cattcttcct cccagctcat gacccggacc taaaggaggt gctcatcaat 4200 gaccaaaaga gcaaccagtt cccatacttg gacgcccctt ttgagctttc gtgccaaccc 4260 tcctcactgt tggcaccaat tcacaagccg gcctcggatc caacccttct ccctggctcc 4320 atcaagaaac gcctcagatt ccgcgcttct tcctccccat attccatcac tccatctgat 4380 caacttcttg gtcaacacct cttctcttct ttgtgcctgg cttatgggcg caaccccaat 4440 tctgtcctcc ccttccaacc tgagctcttc agtgagtgca tatgcattaa tgattacgct 4500 caactctcct ccaagactca agccaccatc gtggccaatc atcaaaggtc tgatcctgac 4560 tggcgcctaa ctgctgtccg catctttgcc aaggctcaac acaaagtaaa cgacgcttcc 4620 atcttttccg ggtggaaggc ttgccaaact ctagccctga tgcacggtta catcattctc 4680 gtactcggcc cagtcaagaa ataccaacgc atttttgatt ccaaggacag acctccccac 4740 atctactacc actgcggtaa aactccctcc cagctctccc aatggtgcca aactcacctt 4800 tctggctctt cctacatcgc caacgactac actgcctttg atcagtccca acacggcgag 4860 gctgtggtcc tggaatgttt gaagatgcgc cgcctctcca tcccggactc tctcattcag 4920 ctccactccc acctcaagtg ttccgtcgac acccagttcg gccccctcac ctgcatgcgc 4980 ctcactggcg agccgggcac ttatgatgac aactctgact acaacctagc tgtcatctac 5040 tcccaatact ccctcaatgg ccaccccatt ctgatctcag gcgatgactc cgtcctttgc 5100 ggcacaccgc ccccttctcc actttggccc actctcaaga aaatgcttca tctccgtttc 5160 aagatcgaac ggacctccca ccccctcttc tgcgggtatt acgtctcccc tcatggcgct 5220 gcccgcaacc cgtatgctct cttcgccaag ctcatgatct gcgttgatga caagagcctc 5280 catgacaaga agttgtccta tctctctgaa ttctccactg gccatctggc tggcgacctg 5340 gtcacctcca ttctcccttc ccacctactt ccctatcagt ccgccgtgca cgacttcttc 5400 tgccggaatt gcacgcccgc ggaaaaaatt ctcctgtctc tggacccaat ccctgagtcc 5460 aaaatcctcc agctcattct caaagttcgc tgggcttctc aagctttctt ttcctacctg 5520 cctcaaaaag ctcgcgaact ccttgtggca cgctcttctc tcccgtccct ctattccaat 5580 cccaaagtct ctcaactgga gtctgaattg cttcccttct ctcaatagat caatggaaga 5640 cacagcaatc atcagaagcc ctcagccctc cataaacgca ccaggcttcc atctgccacc 5700 caccgactca caacaatcct ctgctattga actccccttc cagtttcagg ccaccacttt 5760 tggcgcgact gaaacagctg ctcaaatcag tctggcctcc gccaacgcta ttaccaagct 5820 cgcgtctctc taccgccatg tgcggctcac gcagtgcgct gccaccatca ctccgacagc 5880 ggccgccatt gccaatcctc tcactgtcaa catcgtctgg gtgtctgaca attccactgc 5940 caagcccacc gagattctca atgtctttgg tggatcttcc tacacgtttg gcggcgccct 6000 caatgccacc aagcccctta ccatccctct ccccatgaac tcggtcaact gtatgctcaa 6060 ggactctgtt ctttacacag attgcccaaa gctcctggcc tactcagctg ctcccagctc 6120 tccctccaaa accccaaccg ccactatcca aatccatggc aagctccgct tgtcctcccc 6180 cctcctccaa gccaattaac tctctctccc tcagccacca cctcgctcct cccccatctc 6240 ctatggtaat tgcggacagt tccgctccct ctagcacaca gaggtccatt tgggtgcgac 6300 tcccccccct cccgtgggtc aacgggaacc a 6331 //