ID   J02096; SV 1; linear; viral cRNA; STD; VRL; 1096 BP.
XX
AC   J02096;
XX
DT   13-JUN-1985 (Rel. 06, Created)
DT   16-JUL-2016 (Rel. 129, Last updated, Version 5)
XX
DE   Influenza B virus (B/Lee/1940) segment 8, complete sequence.
XX
KW   nonstructural protein.
XX
OS   Influenza B virus (B/Lee/1940)
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Betainfluenzavirus.
XX
RN   [1]
RP   6-150
RX   DOI; 10.1016/0042-6822(80)90188-9.
RX   PUBMED; 7385583.
RA   Air G.M., Hackett J.A.;
RT   "Gene 8 of influenza virus: sequences of cDNA transcribed from the 3' ends
RT   of viral RNA of influenza A and B strains";
RL   Virology 103(2):291-298(1980).
XX
RN   [2]
RP   1-1096
RX   PUBMED; 6283137.
RA   Briedis D.J., Lamb R.A.;
RT   "Influenza B virus genome: sequences and structural organization of RNA
RT   segment 8 and the mRNAs coding for the NS1 and NS2 proteins";
RL   J. Virol. 42(1):186-193(1982).
XX
DR   MD5; 2cbb7337ee5b46d80980fe7b60cdc8da.
XX
CC   No antigenicity (sub-type) specified. viral RNA sequence determined
CC   by analysis of fragments of cDNA (synthesized with polyadenylated
CC   vRNA) cloned (pbn27) in pbr322. NS-2 mRNA sequence determined by
CC   analysis of cDNA fragment (from above clone) primer. Coding regions
CC   and introns assigned by consideration of open reading frames,
CC   comparison of predicted MW with experimentally determined MW,
CC   comparison to the coding regions of segment 8 in other influenza
CC   strains and consideration of consensus splice sites. The influenza
CC   genome is single-stranded RNA, and minus-stranded. The sequence
CC   reported below is the + strand.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1096
FT                   /organism="Influenza B virus (B/Lee/1940)"
FT                   /segment="8"
FT                   /strain="B/Lee/1940"
FT                   /mol_type="viral cRNA"
FT                   /db_xref="taxon:518987"
FT   CDS             join(43..75,731..1066)
FT                   /codon_start=1
FT                   /product="nonstructural protein NS-2"
FT                   /db_xref="GOA:P03511"
FT                   /db_xref="InterPro:IPR000968"
FT                   /db_xref="UniProtKB/Swiss-Prot:P03511"
FT                   /protein_id="AAA43755.1"
FT                   /translation="MADNMTTTQIEWRMKKMAIGSSTHSSSVLMKDIQSQFEQLKLRWE
FT                   SYPNLVKSTDYHQKRETIRLATEELYLLSKRIDDSILFHKTVIANSSIIADMIVSLSLL
FT                   ETLYEMKDVVEVYSRQCL"
FT   CDS             43..888
FT                   /codon_start=1
FT                   /product="nonstructural protein NS-1"
FT                   /db_xref="GOA:P03502"
FT                   /db_xref="InterPro:IPR004208"
FT                   /db_xref="InterPro:IPR009068"
FT                   /db_xref="PDB:1XEQ"
FT                   /db_xref="PDB:3R66"
FT                   /db_xref="PDB:3RT3"
FT                   /db_xref="PDB:3SDL"
FT                   /db_xref="UniProtKB/Swiss-Prot:P03502"
FT                   /protein_id="AAA43756.1"
FT                   /translation="MADNMTTTQIEVGPGATNATINFEAGILECYERFSWQRALDYPGQ
FT                   DRLHRLKRKLESRIKTHNKSEPENKRMSLEERKAIGVKMMKVLLFMDPSAGIEGFEPYC
FT                   VKNPSTSKCPNYDWTDYPPTPGKYLDDIEEEPENVDHPIEVVLRDMNNKDARQKIKDEV
FT                   NTQKEGKFRLTIKRDIRNVLSLRVLVNGTFLKHPNGDKSLSTLHRLNAYDQNGGLVAKL
FT                   VATDDRTVEDEKDGHRILNSLFERFDEGHSKPIRAAETAVGVLSQFGQEHRLSPEEGDN
FT                   "
XX
SQ   Sequence 1096 BP; 382 A; 199 C; 254 G; 261 T; 0 other;
     cgcagaagca gaggatttat ttagtcactg gcaaacggaa agatggcgga caacatgacc        60
     acaacacaaa ttgaggtggg tccgggagca accaatgcca ctataaactt tgaagcagga       120
     attctggagt gctatgaaag gttttcatgg caaagagccc ttgactatcc tggtcaagac       180
     cgcctacaca gactaaaacg aaaattagaa tcaagaataa agactcacaa caagagtgag       240
     cctgagaata aaaggatgtc tcttgaagag agaaaagcaa ttggggtaaa aatgatgaaa       300
     gtgcttctgt ttatggatcc ctctgctgga attgaagggt ttgagccata ctgtgtgaaa       360
     aatccctcaa ctagcaaatg tccaaattac gattggaccg attaccctcc aaccccagga       420
     aagtaccttg atgacataga agaagagccg gaaaatgtcg atcacccaat tgaggtagta       480
     ttaagggaca tgaacaataa agatgcacga caaaagataa aggatgaagt aaacactcag       540
     aaagagggga aattccgttt gacaataaaa agggatatac gtaatgtgtt gtccttgaga       600
     gtgttggtga acggaacctt cctcaagcac cctaatggag acaagtcctt atcaactctt       660
     catagattga atgcatatga ccagaatgga gggcttgttg ctaaacttgt tgctactgat       720
     gatcggacag tggaggatga aaaagatggc catcggatcc tcaactcact cttcgagcgt       780
     tttgatgaag gacattcaaa gccaattcga gcagctgaaa ctgcggtggg agtcttatcc       840
     caatttggtc aagagcaccg attatcacca gaagagggag acaattagac tggccacgga       900
     agaactttat ctcttgagta aaagaattga tgatagtata ttgttccaca aaacagtaat       960
     agctaacagc tccataatag ctgacatgat tgtatcatta tcattactgg aaacattgta      1020
     tgaaatgaag gatgtggttg aagtgtacag caggcagtgc ttatgaatgt aaaataaaaa      1080
     tcctcttgtt actact                                                      1096
//