ID   J02095; SV 1; linear; viral cRNA; STD; VRL; 1557 BP.
XX
AC   J02095;
XX
DT   13-JUN-1985 (Rel. 06, Created)
DT   16-JUL-2016 (Rel. 129, Last updated, Version 3)
XX
DE   Influenza B virus (B/Lee/1940) segment 6, complete sequence.
XX
KW   glycoprotein; neuraminidase; overlapping genes; subgenome;
KW   unidentified reading frame.
XX
OS   Influenza B virus (B/Lee/1940)
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Betainfluenzavirus.
XX
RN   [1]
RP   1-1557
RX   DOI; 10.1073/pnas.79.22.6817.
RX   PUBMED; 6294654.
RA   Shaw M.W., Lamb R.A., Erickson B.W., Briedis D.J., Choppin P.W.;
RT   "Complete nucleotide sequence of the neuraminidase gene of influenza B
RT   virus";
RL   Proc. Natl. Acad. Sci. U.S.A. 79(22):6817-6821(1982).
XX
RN   [2]
RP   1-358
RX   DOI; 10.1073/pnas.80.16.4879.
RX   PUBMED; 6308656.
RA   Shaw M.W., Choppin P.W., Lamb R.A.;
RT   "A previously unrecognized influenza B virus glycoprotein from a
RT   bicistronic mRNA that also encodes the viral neuraminidase";
RL   Proc. Natl. Acad. Sci. U.S.A. 80(16):4879-4883(1983).
XX
DR   MD5; 4e8a36abc4da776459efc7f02a64bb71.
DR   EuropePMC; PMC104260; 10438823.
XX
CC   Sequence flanked on 5' end by cellular 'cap transfer' DNA
CC   (AGACACACGC). Neuraminidase cds determined by consideration of open
CC   reading frames, and mw and composition of the protein product. The
CC   second open reading frame codes for a protein (nb) found only in
CC   type b influenzas Its functional significance is not yet known.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1557
FT                   /organism="Influenza B virus (B/Lee/1940)"
FT                   /segment="6"
FT                   /strain="B/Lee/1940"
FT                   /mol_type="viral cRNA"
FT                   /db_xref="taxon:518987"
FT   CDS             47..349
FT                   /codon_start=1
FT                   /product="NB protein"
FT                   /db_xref="GOA:P06817"
FT                   /db_xref="InterPro:IPR007288"
FT                   /db_xref="UniProtKB/Swiss-Prot:P06817"
FT                   /protein_id="AAA43748.1"
FT                   /translation="MNNATFNCTNINPITHIRGSIIITICVSLIVILIVFGCIAKIFIN
FT                   KNNCTNNVIRVHKRIKCPDCEPFCNKRDDISTPRAGVDIPSFILPGLNLSEGTPN"
FT   CDS             54..1454
FT                   /codon_start=1
FT                   /product="neuraminidase"
FT                   /db_xref="GOA:P03474"
FT                   /db_xref="InterPro:IPR001860"
FT                   /db_xref="InterPro:IPR036278"
FT                   /db_xref="PDB:1B9S"
FT                   /db_xref="PDB:1B9T"
FT                   /db_xref="PDB:1B9V"
FT                   /db_xref="PDB:1INF"
FT                   /db_xref="PDB:1INV"
FT                   /db_xref="PDB:1IVB"
FT                   /db_xref="PDB:1VCJ"
FT                   /db_xref="UniProtKB/Swiss-Prot:P03474"
FT                   /protein_id="AAA43749.1"
FT                   /translation="MLPSTVQTLTLLLTSGGVLLSLYVSASLSYLLYSDVLLKFSSTKT
FT                   TAPTMSLECTNASNAQTVNHSATKEMTFPPPEPEWTYPRLSCQGSTFQKALLISPHRFG
FT                   EIKGNSAPLIIREPFVACGPKECRHFALTHYAAQPGGYYNGTRKDRNKLRHLVSVKLGK
FT                   IPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDNDALVKIKYGEAYTDTYHSYAHNIL
FT                   RTQESACNCIGGDCYLMITDGSASGISKCRFLKIREGRIIKEILPTGRVEHTEECTCGF
FT                   ASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTKTYLDTPRPDDGSIAGPCESN
FT                   GDKWLGGIKGGFVHQRMASKIGRWYSRTMSKTNRMGMELYVKYDGDPWTDSDALTLSGV
FT                   MVSIEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKDTWHSAATAIYCLMGSGQLLWDT
FT                   VTGVDMAL"
XX
SQ   Sequence 1557 BP; 511 A; 301 C; 346 G; 399 T; 0 other;
     agcagaagca gagcatattc ttagaactga agtgaacagg ccaaaaatga acaatgctac        60
     cttcaactgt acaaacatta accctattac tcacatcagg gggagtatta ttatcactat       120
     atgtgtcagc ctcattgtca tacttattgt attcggatgt attgctaaaa ttttcatcaa       180
     caaaaacaac tgcaccaaca atgtcattag agtgcacaaa cgcatcaaat gcccagactg       240
     tgaaccattc tgcaacaaaa gagatgacat ttccaccccc agagccggag tggacatacc       300
     ctcgtttatc ttgccagggc tcaacctttc agaaggcact cctaattagc cctcataggt       360
     tcggagagat caaaggaaac tcagctccct tgataataag agaacctttt gttgcttgtg       420
     gaccaaaaga atgcagacac tttgctctga cccattatgc agctcagccg gggggatact       480
     acaatggaac aagaaaggac agaaacaagc tgaggcatct agtatcagtc aaattgggaa       540
     aaatcccaac tgtggaaaac tccattttcc acatggcagc ttggagcgga tccgcatgcc       600
     atgatggtag agaatggaca tatatcggag ttgatggtcc tgacaatgat gcattggtca       660
     aaataaaata tggagaagca tatactgaca catatcattc ctatgcacac aacatcctaa       720
     gaacacaaga aagtgcctgc aattgcatcg ggggagattg ttatcttatg ataacagacg       780
     gctcagcttc aggaattagt aaatgcagat ttcttaaaat tagagagggt cgaataataa       840
     aagaaatact tccaacagga agagtggagc acactgaaga gtgcacatgc gggttcgcca       900
     gcaataaaac catagaatgt gcctgtagag acaacagtta cacagcaaaa agaccctttg       960
     tcaaattaaa tgtggaaact gatacagctg aaataagatt gatgtgcaca aagacttatc      1020
     tagacactcc cagaccggat gatggaagca tagcagggcc ttgcgaatct aatggagaca      1080
     agtggcttgg aggcatcaaa ggaggattcg tccatcaaag aatggcatct aagattggaa      1140
     gatggtactc ccgaacgatg tctaaaacta acagaatggg gatggaactg tatgtaaagt      1200
     atgatggtga cccatggact gacagtgatg ctcttactct tagtggagta atggtttcca      1260
     tagaagaacc tggttggtat tcttttggct tcgaaataaa ggacaagaaa tgtgatgtcc      1320
     cttgtattgg gatagagatg gtacacgatg gtggaaaaga tacttggcat tcagctgcaa      1380
     cagccattta ctgtttgatg ggctcaggac aattgctatg ggacactgtc acaggcgttg      1440
     atatggcttt ataatagagg aatggttgga tctgttctaa accctttgtt cctattttat      1500
     ttgaacagtt gttcttacta gatttaattg tttctgaaaa atgctcttgt tactact         1557
//