ID   HQ918256; SV 1; linear; genomic RNA; STD; VRL; 1673 BP.
XX
AC   HQ918256;
XX
DT   31-JUL-2011 (Rel. 109, Created)
DT   31-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Onion yellow dwarf virus isolate Spanish polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1673
RA   Lunello P., Mansilla C., Sanchez F., Fresno J., Conci V., Ponz F.;
RT   "Identification of garlic viruses in Spain";
RL   Unpublished.
XX
RN   [2]
RP   1-1673
RA   Lunello P., Mansilla C., Sanchez F., Fresno J., Conci V., Ponz F.;
RT   ;
RL   Submitted (24-JAN-2011) to the INSDC.
RL   Biotecnologia, CBGP, M-40 km 38, Pozuelo de Alarcon, Madrid 28223, Spain
XX
DR   MD5; 60f42b2c5761bbead24bd7ba2ed0f2c1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1673
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="garlic"
FT                   /isolate="Spanish"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /collection_date="Mar-2005"
FT                   /PCR_primers="fwd_name: Sprimer, fwd_seq:
FT                   ggnaayaayagyggncarcc, rev_name: M4T, rev_seq:
FT                   gttttcccagtcacgacttttttttttttttt"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1410
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein and nuclear inclusion protein"
FT                   /db_xref="GOA:G0ZCN7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:G0ZCN7"
FT                   /protein_id="AEK81556.1"
FT                   /translation="GNNSGQPSTVVDNTIMVMLSVQYALRKCEIETSKQSEIIKYFCNG
FT                   DDLLIAVHPDYEHILDHFKQYFHELGLDYDFSNRSKSKEDVYFMSHRGLLRDGIYIPKL
FT                   DRERVVSILEWDRADKPEHRMEAICASMIEAWGYPELVHEIRKFYQWLLEQAPYNVIAQ
FT                   SGKAPYIAETALRKLFTDVDASEEELEKYYDMYMELDNEETIPKEVRYQAGDGEDAAAQ
FT                   TSTTKQIARQKDKDVDAGTTGKFAVPRIKALSDKMRFPKVGKKVVLNAEHLLAYKPEQI
FT                   ELYNTRSTQQQFETWYTSIKKDYDVDDEQMKIILDGLMVWCIENGTSPNLAGNWTMMDG
FT                   DEQVEYPLAPILDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLA
FT                   RYAFDFYEMTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNPIEXAPERXXAADIN
FT                   KNHPPLLGIKM"
FT   3'UTR           1411..1673
XX
SQ   Sequence 1673 BP; 603 A; 288 C; 370 G; 402 T; 10 other;
     gggaataaca gcggccaacc atccacagtt gtcgacaata caataatggt gatgcttagt        60
     gtgcaatatg ctttgcggaa gtgtgaaatt gaaacaagca agcaaagcga aatcattaaa       120
     tatttttgta atggcgatga tttgttaata gccgtgcatc cagattatga acacatactt       180
     gatcatttta aacaatactt tcacgaactt gggttagact atgatttttc caatagaagt       240
     aaatccaagg aagatgttta ctttatgtcc cacagaggat tactcagaga cggcatttac       300
     attccgaaat tggatagaga gcgtgtcgta tcaatacttg aatgggaccg tgcagataaa       360
     cctgaacatc ggatggaagc tatatgtgcg tccatgattg aagcatgggg ttaccctgag       420
     cttgttcatg aaattagaaa attctatcag tggttactag aacaagctcc gtacaatgta       480
     atagcgcaaa gtggaaaagc accctatata gcggaaacag cactgagaaa attgttcact       540
     gatgttgacg ctagtgagga ggaactagag aaatactacg acatgtacat ggaacttgac       600
     aatgaagaga caattccaaa agaggttcga tatcaagctg gcgatgggga agatgcagca       660
     gcacaaacaa gcacgacgaa gcaaattgcg agacaaaaag ataaagacgt tgacgctgga       720
     acaaccggta agtttgcagt gcccaggatt aaagcgttgt cagacaaaat gcgatttcca       780
     aaagttggaa agaaagtagt gttaaacgca gagcacttat tagcatacaa accagagcaa       840
     atcgagttgt acaacacgag gtcaacgcaa caacagttcg aaacttggta cacgtcaatt       900
     aagaaggatt atgacgtgga tgacgaacaa atgaagatta tactagatgg tttaatggtt       960
     tggtgcattg aaaacggaac ttccccaaat ctagcaggga attggactat gatggacggt      1020
     gatgaacaag ttgaatatcc attagcacca attttggata atgcaaaacc gacatttagg      1080
     cagataatgg cgcatttcag tgatgcagct gaagcatata ttgaatatcg aaacgccaca      1140
     gaaaaataca tgccccggta tggacttcag cggaatctaa cagaattaag tttagcacgt      1200
     tacgcattcg acttttatga aatgacttca aaaactccca agcgagctaa ggaagcacac      1260
     atgcaaatga aggcagcagc agttagaggg gcaactaacc gtttgtttgg cctggatggt      1320
     aacgtaaacc caatagargr ggccccggaa aggcmcmcag cagcagatat aaataagaat      1380
     caccccccgt tgcttggtat taaaatgtaa tcctgcaggg aagtytttag ttttatatat      1440
     aagtatataa aaacgtatgt aatatgtaat ccttttcgct tcgtttamcc tgacttcgag      1500
     caacgaaatg tggtgtmccc ctagttgtgg cgaacgatac ggttaaatat ttgtgattaa      1560
     tgtcgagctt catgagagtg atgtwtcccg aggtgaatct ttgcttgaat tcsgargcca      1620
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa             1673
//