ID   HQ916894; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   HQ916894;
XX
DT   26-JUL-2011 (Rel. 109, Created)
DT   26-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Rice black streaked dwarf virus isolate JSyangzhou5 capsid protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1677
RA   Gao R.Z., Cheng Z.B., Zhou Y.J.;
RT   ;
RL   Submitted (23-JAN-2011) to the INSDC.
RL   Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences,
RL   No. 50.Zhongling Road, Nanjing, Jiangsu 210014, China
XX
DR   MD5; 6f66ca23b10de0a1d77e1e5aafad879b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /host="rice"
FT                   /isolate="JSyangzhou5"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:10990"
FT   CDS             1..1677
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:G0ZCK0"
FT                   /protein_id="AEK67404.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKAPHVASSQATVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIEALTEGNITLKPFSADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVRLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYEMTSLSTLRTNYDGTSTSSPFTDKKFID
FT                   WYIKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSIVVQ
FT                   THKGEMSLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVIMKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSSSNTSSHEHTQKIVLNKVTR"
XX
SQ   Sequence 1677 BP; 551 A; 310 C; 296 G; 520 T; 0 other;
     atggctgaca taagactcga tatagcgccc gatcttatcc ataatggtgt accccagaga        60
     ctttccgata caataatttt aaacaaccga ccaacaatca ctctgttatc tcatttcaac       120
     aatctatttc atgaattaaa cattgtcaaa gcgccccacg ttgcatcttc ccaagctacc       180
     gttaatttgt acattcgcaa acatctgttg acacgacttc acgatagact acaaaccgta       240
     gaaactagca ccctacccaa catcacacaa cttaaagacc atattcgcag tttctttcaa       300
     aatgaacacc aacctatttt tcagacccta acgaacaacg acctaagcga agaatttgta       360
     ggtgtgacta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata       420
     gaacgtgtgc aaattgaggc cttaactgaa ggaaacatta cgttgaagcc cttttccgct       480
     gatggtttag aagtcattct cgatgatagt tatattggca tagttggcaa aattccaggt       540
     ttagaagttc ataaattgtt agataaatgt tgtcgcgaag ttcctgctca aatgggaata       600
     cttactgatg aagttagact tttaatgcgt actggtaaat tacgaattga tggtggttat       660
     gatttcaatt gtcccgcaag cactacagac gttactcact acggtggtta tgaccaattt       720
     tcacgtcaaa tgttcgaacg tttgaatcta ttttataata ttagtctcag cataattccc       780
     gtttcagctc tgaaaacagt tcatttattt gaaaaagaat taagtgtttt ggatgcagat       840
     aaatctttgc tcgaacaaac ttggagtgca gtagcgtcat ttgttgaaac ttggcaagtt       900
     aaatctaaag ttaaagctga tgatccagat gaatacgaaa tgaccagttt gtccactttg       960
     cgcactaatt acgatggtac ttctacttct agtcctttta cagataagaa attcattgac      1020
     tggtatatta agactttttc taaaactgag aaaggatcgt ctttgcgtcg aaatgaatta      1080
     gaagagaaaa gtgccactag tacatcaact acagtaaaga aggttaaaat tcatttttcc      1140
     gttcaatatt ttgacgaatt taaagttaat ggacacgaaa aaagcattgt agttcaaact      1200
     cataaaggtg aaatgtcatt agattattat cgtaaaattg gcgaagtgtt gagtgcgatt      1260
     tggaaacgcg gtaaatcttt ggctgtacct tgttttgatt acattaaact tggcgttgaa      1320
     aaagcatttc atttggcacc agtaattatg aagaagtata acttgacgat cgacgatatt      1380
     atcaacttca ttgataaagg accttcctat ttggctaagt tggacaaaat tgatgattgg      1440
     tctttaattt caaagcttat tattactagt gttttaccta acatcattca agctgtttat      1500
     aaaactgatc ctagtaataa tgttatgaac tcagtaatta tcagtagagc gaataacttg      1560
     ctgaaatctg atagggacag gctattaaag aaggcacttt ccgccaacgt ttcttcctcc      1620
     aacacatcta gtcatgagca cacacagaag atagtactaa acaaagtgac aagatga         1677
//