ID   HQ916882; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   HQ916882;
XX
DT   26-JUL-2011 (Rel. 109, Created)
DT   26-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Rice black streaked dwarf virus isolate HBzunhua1 capsid protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1677
RA   Gao R.Z., Cheng Z.B., Zhou Y.J.;
RT   ;
RL   Submitted (23-JAN-2011) to the INSDC.
RL   Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences,
RL   No. 50.Zhongling Road, Nanjing, Jiangsu 210014, China
XX
DR   MD5; a270e21300a2c3f9b3fa1d3412f1a20a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="10"
FT                   /host="maize"
FT                   /isolate="HBzunhua1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:10990"
FT   CDS             1..1677
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:G0ZCI8"
FT                   /protein_id="AEK67392.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT                   LNIVKSPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT                   PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT                   EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT                   SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSASSPFTDKKFID
FT                   WYLKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQ
FT                   THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVILKKYNLTID
FT                   DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKSDRDRLLKKALSANVSPSNTSSHEHVQKIVLNKVTR"
XX
SQ   Sequence 1677 BP; 548 A; 307 C; 294 G; 528 T; 0 other;
     atggctgaca taagactcga catagcgccc gatcttatcc ataatggtgt accccagaga        60
     ctttccgata caataatttt gaacaaccga ccaacaatca ctctgctatc tcatttcaac       120
     aatctatttc atgaattaaa cattgtcaaa tcgccccacg ttgcatcttc ccaaactacc       180
     gttaatttgt acattcgtaa gcatttgttg acccgacttc atgatagact gcaaaccgta       240
     gaaactagca ctttacccaa catcacgcaa cttaaagacc atattcgtag cttctttcaa       300
     aatgaacacc aacctatttt tcagacccta actaacaatg acttaagtga agaatttgta       360
     ggtgtgacta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata       420
     gaacgtgtac aaattgagac cctaactgaa ggaaacatta ctttgaaacc cttttccgct       480
     gatggtctag aagtcattct cgatgatagt tacattggta tagttggtaa aattccaggt       540
     ttagaagttc ataaattact agataaatgt tgtcgtgaag ttcctgctca aatgggaata       600
     cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga tggtggttac       660
     gattttaatt gtcctgcgag cactacggat gttacacatt acggtggtta tgaccaattt       720
     tcacgtcaaa tgttcgaacg tttgaatcta ttttataata ttagccttag cataatcccc       780
     gtttcagctt tgaaaacagt tcatttattt gaaaaagaac taagtgtttt ggatgcagat       840
     aaatctttac tcgaacaaac ttggagcgca gtagcgtcat ttgttgaaac ttggcaggtt       900
     aaatctaaag ttaaagccga tgatccagat gaatatgaat tgaccagttt gtccacgttg       960
     cgcactaatt acgatggcac ctctgcttct agtcctttca cagataagaa attcattgat      1020
     tggtacctta agaccttttc taaaactgag aaaggatcgt cgttgcgtcg aaacgaattg      1080
     gaagagaaaa gtgccactag tacttcaact acagtaaaga aggttaaaat tcatttctcc      1140
     gttcaatatt ttgatgaatt taaagttaat ggacatgaaa aaagcgttgt agttcaaact      1200
     cataaaggcg aaatgacatt agattattat cgtaagattg gcgaagtgtt aagtgctatt      1260
     tggaaacgtg gtaaatcctt ggctgtacct tgttttgatt acattaaact tggcgttgag      1320
     aaagcatttc atttagcacc cgtaattctg aagaagtata acttaactat tgatgatatt      1380
     atcaacttca ttgataaagg accttcttat ttagctaaat tagataagat tgatgattgg      1440
     tctttaattt caaagcttat cattaccagc gttttaccta atatcattca agctgtttac      1500
     aaaaccgatc caagtaataa tgttatgaac tcagtaatta tcagtagagc gaataatttg      1560
     ttgaaatctg acagggatag gctattaaag aaggcacttt ccgccaacgt ttctccttcc      1620
     aacacatcta gtcatgaaca tgtgcagaag atagtattaa acaaagtaac aagatga         1677
//