Dbfetch
ID HQ916877; SV 1; linear; genomic RNA; STD; VRL; 1677 BP. XX AC HQ916877; XX DT 26-JUL-2011 (Rel. 109, Created) DT 26-JUL-2011 (Rel. 109, Last updated, Version 1) XX DE Rice black streaked dwarf virus isolate AHlujiang44 capsid protein gene, DE complete cds. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-1677 RA Gao R.Z., Cheng Z.B., Zhou Y.J.; RT ; RL Submitted (23-JAN-2011) to the INSDC. RL Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, RL No. 50.Zhongling Road, Nanjing, Jiangsu 210014, China XX DR MD5; 1cf8ffe7312b27909c9a1a6d4fcfdd28. XX FH Key Location/Qualifiers FH FT source 1..1677 FT /organism="Rice black streaked dwarf virus" FT /segment="10" FT /host="rice" FT /isolate="AHlujiang44" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2009" FT /db_xref="taxon:10990" FT CDS 1..1677 FT /codon_start=1 FT /product="capsid protein" FT /db_xref="GOA:Q9IHZ4" FT /db_xref="InterPro:IPR008618" FT /db_xref="UniProtKB/TrEMBL:Q9IHZ4" FT /protein_id="AEK67387.1" FT /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE FT LNIVKSPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ FT PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL FT EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF FT NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK FT SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSASSPFTDKKFID FT WYIKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQ FT THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVILKKYNLTID FT DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA FT NNLLKSDRDRLLKKALSANVSSSNTSSHEHVQKIVLNKVTR" XX SQ Sequence 1677 BP; 547 A; 301 C; 295 G; 534 T; 0 other; atggctgaca taagactcga catagcgccc gatcttatcc ataatggtgt accccagaga 60 ctttccgata caataatttt aaacaaccga ccaacaatca ctctgctatc tcatttcaac 120 aatctatttc atgaactaaa cattgtcaaa tcgccccacg ttgcatcttc ccaaactacc 180 gttaatttgt acattcgtaa gcatttgttg acccgacttc atgatagact gcaaaccgta 240 gaaaccagca ctttgcccaa cattacacaa cttaaagatc atattcgtag cttttttcaa 300 aatgaacacc aacctatttt tcagacccta acgaacaacg acctaagtga agaatttgta 360 ggtgtgacta cttttggact aagcttattt gctacctcca aacttgatgc tgaacaaata 420 gaacgtgtac aaattgagac cctaactgaa ggaaacatta ctttgaaacc cttttctgct 480 gatggtttag aagtcattct cgatgatagt tatattggta tagttggtaa aattccaggt 540 ttagaagttc ataaattgtt agataaatgt tgtcgtgaag ttcctgctca aatgggaata 600 cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga tggtggttac 660 gattttaatt gtcctgcaag cactactgac gttacacatt atggtggtta tgaccaattt 720 tcacgtcaaa tgttcgaacg tttgaatcta ttttataaca ttagccttag cataattccc 780 gtttcagctt tgaaaacagt tcatttattt gaaaaagaac taagtgtttt agatgcagat 840 aaatctttac tcgaacaaac ttggagcgcg gtagcgtcat ttgttgaaac ttggcaggtt 900 aaatctaaag ttaaagccga tgatccagat gaatatgaat tgaccagttt gtccactttg 960 cgcactaatt acgatggcac ctctgcttct agtcctttta cagataagaa attcattgat 1020 tggtacatta agactttttc taagactgag aaaggatcgt cgttgcgtcg aaacgaatta 1080 gaagagaaaa gtgccactag tacttcaact acagtaaaga aggttaagat tcatttctcc 1140 gttcaatatt ttgatgaatt taaagttaat ggacatgaaa aaagcgttgt agttcaaact 1200 cataaaggcg aaatgacgtt agattattat cgtaaaattg gcgaagtgtt aagtgctatt 1260 tggaaacgtg gtaaatcttt ggctgtacct tgttttgatt acattaagct tggcgttgag 1320 aaagcatttc atttagcacc cgtaattctg aagaagtata atttgactat tgatgacatt 1380 atcaatttca ttgataaagg accttcttat ttagctaaat tagacaagat tgatgattgg 1440 tctttaattt caaagcttat cattaccagc gttttaccta atatcattca agctgtttac 1500 aaaaccgatc caagtaataa tgttatgaac tcagtaatca tcagtagagc gaacaatttg 1560 ttgaaatctg atagggacag gctattaaag aaggcacttt ccgccaacgt ttcttcttcc 1620 aacacatcta gtcatgaaca tgtacagaag atagtattaa acaaagtgac aagatga 1677 //