ID   HQ916354; SV 1; linear; genomic RNA; STD; VRL; 2215 BP.
XX
AC   HQ916354;
XX
DT   17-APR-2011 (Rel. 108, Created)
DT   17-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate Gd movement protein (3a) and coat protein
DE   (cp) genes, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2215
RA   Balazs E., Salanki K., Diveki Z., Kadar K.;
RT   "Molecular characterization of Cucumber mosaic virus (CMV) isolated from
RT   oilseed pumpkin";
RL   Unpublished.
XX
RN   [2]
RP   1-2215
RA   Balazs E., Salanki K., Diveki Z., Kadar K.;
RT   ;
RL   Submitted (24-JAN-2011) to the INSDC.
RL   Applied Genomics Department, Agricultural Research Institute of the
RL   Hungarian Academy of Sciences, Brunszvik Str. 2, Martonvasar H-2462,
RL   Hungary
XX
DR   MD5; 5ac69193dc7710b18397568f5db10f8f.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2215
FT                   /organism="Cucumber mosaic virus"
FT                   /host="oilseed pumpkin"
FT                   /isolate="Gd"
FT                   /mol_type="genomic RNA"
FT                   /country="Austria"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:12305"
FT   gene            121..960
FT                   /gene="3a"
FT   CDS             121..960
FT                   /codon_start=1
FT                   /gene="3a"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q70WE9"
FT                   /protein_id="AEB39609.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEDLNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   gene            1258..1914
FT                   /gene="cp"
FT   CDS             1258..1914
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q76U37"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q76U37"
FT                   /protein_id="AEB39610.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2215 BP; 516 A; 522 C; 527 G; 650 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgctgtc cgcacatttg        60
     agtcgtgctg tccgcacata ttttatcttt ctgtgtacag tgtgttagat ttcccgaggc       120
     atggctttcc aaggtaccag taggacttta actcaacagt cctcagcggc tacgtctgac       180
     gatcttcaaa agatattatt tagccctgaa gccattaaga aaatggctac tgagtgtgac       240
     ctaggccggc atcattggat gcgcgctgat aatgctattt cagtccggcc cctcgttccc       300
     gaagtaaccc acggtcgtat tgcttccttc tttaagtctg gatatgatgt tggtgaatta       360
     tgctcaaaag gatacatgag tgtccctcaa gtgttatgtg ctgttactcg aacggtttcc       420
     actgatgctg aagggtcttt gagaatttac ttagctgatc taggcgacaa ggagttatct       480
     cccatagatg ggcaatgcgt ttcgttacat aaccatgatc ttcccgcttt ggtgtctttc       540
     caaccgacgt atgattgtcc tatggaaaca gttgggaatc gtaagcggtg ttttgctgtc       600
     gttatcgaaa gacatggtta cattgggtat accggtacca cagctagtgt gtgtagtaat       660
     tggcaagcaa ggttttcatc taagaataac aactacactc atatcgcagc tgggaagact       720
     ctagtactgc ctttcaacag attagctgag caaacaaaac cgtcagctgt tgctcgcctg       780
     ttgaagtcgc aattgaacaa cattgaatct tcgcaatatt tgttaacgaa tgcgaagatt       840
     aatcaaaatg cgcgcagtga gtccgaggat ttaaatgttg agagccctcc cgccgcaatc       900
     gggagttctt ccgcgtcccg ctccgaagcc ttcagaccgc aggtggttaa cggtctttag       960
     cactttggtg cgtattagta tataagtatt tgtgagtctg tacataatac tatatctata      1020
     gtgtcctgtt tgagttatta cagtagacat ctgtgacgcg atgccgtgtt gagaagggaa      1080
     cacatctggt tttagtaagc ctacatcata gttttgaggt tcaattcctc ttactccctg      1140
     ttgagcccct tactttctca tggatgcttc tccgcgagat tgcgttattg tctactgact      1200
     atatagagag tgtgtgtgct gtgttttctc ttttgtgtcg tagaattgag tcgagtcatg      1260
     gacaaatctg aatcaaccag tgctggtcgt aaccgtcgac gtcgtccgcg tcgtggttcc      1320
     cgctccgccc cttcctccgc ggatgctaac tttagagtct tgtcgcagca gctttcgcga      1380
     cttaataaga cgttagcagc tggtcgtcca actattaacc acccaacctt tgtagggagt      1440
     gaacgctgta gacctgggta cacgttcaca tctattaccc taaagccacc aaaaatagac      1500
     cgtgggtctt attacggtaa aaggttgtta ctacctgatt cagtcacgga atatgataag      1560
     aagcttgttt cgcgcattca aattcgagtt aatcctttgc cgaaatttga ttctaccgtg      1620
     tgggtgacag tccgtaaagt tcctgcctcc tcggacttat ccgttgctgc catctctgct      1680
     atgttcgcag acggagcctc accggtactg gtttatcagt atgccgcatc tggagtccaa      1740
     gccaacaaca aactgttgta tgacctttcg gcgatgcgcg ctgatatagg tgacatgaga      1800
     aagtacgccg tcctcgtgta ttcaaaagac gatgcgctcg agacggacga gctagtactg      1860
     catgttgaca tcgagcacca acgcattccc acgtctggag tgctcccagt ttgattccgt      1920
     gttcccagaa tcctccctcc gatctctgtg gcgggagctg agttggcagt tctgctataa      1980
     actgtctgaa gtcactaaac gttttacggt gaacgggttg tccatccagc ttacggctaa      2040
     aatggtcagt cgtggagaaa tccacgccag tagatttaca aatctctgag gcgcctttga      2100
     aaccatctcc taggtttctt cggaaggact tcggtccgtg tacctctagc acaacgtgct      2160
     agtttcaggg tacgggtgcc cccccactct cgtgggggcc tccataagga gacca           2215
//