Dbfetch

Dbfetch

ID   HQ891904; SV 1; linear; viral cRNA; STD; VRL; 951 BP.
XX
AC   HQ891904;
XX
DT   22-MAR-2011 (Rel. 108, Created)
DT   23-JUN-2011 (Rel. 109, Last updated, Version 3)
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DE   Rose rosette virus isolate MS1 putative nucleocapsid p3 gene, complete cds.
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KW   .
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OS   Rose rosette emaravirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Fimoviridae; Emaravirus.
XX
RN   [1]
RP   1-951
RX   DOI; 10.1099/vir.0.031146-0.
RX   PUBMED; 21471323.
RA   Laney A.G., Keller K.E., Martin R.R., Tzanetakis I.E.;
RT   "A discovery 70 years in the making: characterization of the Rose rosette
RT   virus";
RL   J. Gen. Virol. 92(Pt 7):1727-1732(2011).
XX
RN   [2]
RP   1-951
RA   Laney A.G., Keller K.E., Martin R.R., Tzanetakis I.E.;
RT   ;
RL   Submitted (14-JAN-2011) to the INSDC.
RL   Plant Pathology, University of Arkansas, 495 N Campus Dr PTSC 217,
RL   Fayetteville, AR 72703, USA
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DR   MD5; ca49d93ab80d0a538aafb56b00fecf6e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..951
FT                   /organism="Rose rosette emaravirus"
FT                   /segment="RNA3"
FT                   /host="Rosa hybrid cultivar"
FT                   /isolate="MS1"
FT                   /mol_type="viral cRNA"
FT                   /country="USA:Mississippi"
FT                   /collection_date="01-Jun-2010"
FT                   /db_xref="taxon:1980433"
FT   CDS             1..951
FT                   /codon_start=1
FT                   /product="putative nucleocapsid p3"
FT                   /db_xref="GOA:F2YDN5"
FT                   /db_xref="UniProtKB/TrEMBL:F2YDN5"
FT                   /protein_id="ADZ55368.1"
FT                   /translation="MAPKNEFKKPSKIENPGTSTSNTLAADTVIIGADQKLRVLKLTNV
FT                   QNKKLVKPESSELDPVYIEPTPFTSEIQSPNNFSLAPYRNFCNVGIAVSYLSRSLEIKE
FT                   QLQIRNVFIRTSNKDSLTIVKDLNESDVLNVVSFNKACAILSAGVLKHVFKEEFDWTLK
FT                   KYVPTTVSSRTAPDETVVNRLAGQMGMDSKNPYYWMIAPGDEFLYELYPAEVLAYTLIR
FT                   LEFRKNLNIPDDMTDSDIVNSLVMKMNRIHKLETTPFDDAISLIGRENISEAYVELARD
FT                   IGTTSKSKRNDEAIGKFKELIKNFAPALAADRGAQ"
XX
SQ   Sequence 951 BP; 314 A; 169 C; 192 G; 276 T; 0 other;
     atggcaccaa agaatgagtt caagaagcct tcgaagatcg aaaatcctgg aacaagcaca        60
     tccaacactc ttgcagctga tactgttatc atcggagctg atcagaagct tcgggtcctc       120
     aagttgacaa atgttcaaaa taagaagtta gtgaagcctg agagttcaga attggaccca       180
     gtttatattg aacctacacc ttttacttca gagattcaaa gtcccaacaa ttttagtcta       240
     gcaccttaca gaaacttctg taatgttggc atagctgttt cttatctttc taggtccctg       300
     gaaatcaagg agcagcttca aataagaaat gtgtttataa gaacatcaaa caaagattct       360
     ctgacaattg ttaaagactt gaatgagtct gatgttctaa atgttgtttc gtttaacaaa       420
     gcatgtgcaa ttttatcagc tggtgttcta aagcatgtgt tcaaagaaga gtttgactgg       480
     actcttaaga agtatgtacc tactactgtt tcatcaagaa ctgcaccaga tgaaacagtt       540
     gttaacaggc tagcagggca aatgggaatg gactcaaaaa atccttatta ttggatgatc       600
     gcaccagggg atgagtttct gtatgagctc tatccagctg aagtgttggc ttatacactt       660
     attcgtttag aatttcgaaa aaacttgaat attcctgatg acatgactga tagtgacatt       720
     gtcaattctt tagtcatgaa gatgaatcgt attcacaagc tagagactac tcctttcgat       780
     gatgctataa gtctcattgg aagagaaaac atatctgaag catatgttga acttgctaga       840
     gacattggta caacaagcaa atcaaagagg aatgatgaag ctataggtaa gttcaaagaa       900
     ctgatcaaga actttgctcc tgctctagct gctgatagag gtgcacaata a                951
//