ID   HQ875135; SV 1; linear; genomic RNA; STD; VRL; 1163 BP.
XX
AC   HQ875135;
XX
DT   21-JUN-2011 (Rel. 109, Created)
DT   18-AUG-2011 (Rel. 109, Last updated, Version 2)
XX
DE   Potato virus S isolate HAM.KA.20 coat protein (CP) gene, complete cds; and
DE   11K protein (11K) gene, partial cds.
XX
KW   .
XX
OS   Potato virus S
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1163
RX   DOI; 10.1007/s11262-011-0619-3.
RX   PUBMED; 21567245.
RA   Salari K., Massumi H., Heydarnejad J., Hosseini Pour A., Varsani A.;
RT   "Analysis of Iranian Potato virus S isolates";
RL   Virus Genes 43(2):281-288(2011).
XX
RN   [2]
RP   1-1163
RA   Massumi H., Salari K., Heydarnejad J., Hosseini Pour A., Varsani A.;
RT   ;
RL   Submitted (11-JAN-2011) to the INSDC.
RL   Dept. of Plant Pathology, Shahid Bahonar University of Kerman, Kerman
RL   7616914111, Iran
XX
DR   MD5; 5020b305ee2c117e49f3616c26e2d690.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1163
FT                   /organism="Potato virus S"
FT                   /host="Solanum tuberosum"
FT                   /isolate="HAM.KA.20"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:12169"
FT   gene            1..885
FT                   /gene="CP"
FT   CDS             1..885
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TEJ8"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:F8TEJ8"
FT                   /protein_id="AEI17873.1"
FT                   /translation="MPPKPDPTSSGETPQAIPPVPPPRNVEEHRVGQDQGPGQSEEAML
FT                   EQRLIRLIELMASKRHNSTLSNISFEIGRPSLEPTPETRRNPENPYSRFSIDELFKMEI
FT                   RSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSSVYLDPAGTVEFP
FT                   TGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARFAAFD
FT                   TFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMAIDKSNRNERLANTNVEYTGGMLG
FT                   AEIVRNHRNAINQ"
FT   gene            882..>1163
FT                   /gene="11K"
FT   CDS             882..>1163
FT                   /codon_start=1
FT                   /gene="11K"
FT                   /product="11K protein"
FT                   /db_xref="GOA:F8TEJ9"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:F8TEJ9"
FT                   /protein_id="AEI17874.1"
FT                   /translation="MKADRLAMLLLCVHRLGYTLPVEVCVNIISLSAGPVSGGRSTYAR
FT                   KRRARSIGRCWRCYRVYPPICNSKCDNRTCRPGISQNYKVVTFIRGWSN"
XX
SQ   Sequence 1163 BP; 304 A; 264 C; 320 G; 275 T; 0 other;
     atgccgccca aaccggatcc aacaagctca ggcgagacac cacaagcaat accgcctgtg        60
     ccgccgcccc ggaacgtaga ggagcataga gttggccaag atcaggggcc cgggcagagt       120
     gaagaggcta tgcttgagca gaggctcatc agattgattg aactcatggc ctcgaaaagg       180
     cacaattcaa cattgagcaa catctctttt gagataggta ggccctcact tgagccgacc       240
     cctgaaacgc ggaggaatcc ggagaaccca tactcgcggt tttcgatcga tgagctgttc       300
     aagatggaaa tccggtctgt gtccaataac atggcgaaca ccgagcaaat ggcacaaatc       360
     actgctgaca tcgctggact tggggtcccc actgaacatg ttgctggggt catactgaaa       420
     gtagtgatca tgtgtgcaag cgtgagtagc tctgtttatc tagatccggc agggactgtg       480
     gagttcccaa ctggcgcagt gcccttggac tcgatcattg caatcatgaa gaatcgcgcg       540
     gggttgagaa aagtgtgcag gctgtatgct ccagttgtgt ggaattacat gttggttcag       600
     aataggccac cttcggattg gcaggccatg ggatttcaat ggaatgcacg cttcgccgca       660
     tttgacacat tcgattatgt gactaatggg gctgcaatac aacctgtcga ggggctcata       720
     cgcaggccca cacctgagga aacaatagct cacaatgccc acaagagtat ggcaattgac       780
     aagtcgaaca gaaatgagcg attggccaac actaatgttg agtacactgg agggatgctt       840
     ggcgctgaga ttgtgcgcaa tcaccgtaat gcgatcaacc aatgaaggca gatcgattag       900
     ctatgttgtt attgtgtgtc catcgactgg ggtatacttt gccagttgaa gtttgtgtaa       960
     atataataag cctaagcgca ggtccagttt ctgggggtcg ttccacttac gctcgtaagc      1020
     ggagggcccg cagcattggg cgttgctggc gatgttatcg tgtctatcca cctatttgta      1080
     attctaagtg tgataatagg acatgccgtc caggcattag tcaaaattat aaggtagtga      1140
     ctttcattcg gggttggagt aac                                              1163
//