ID HQ852052; SV 1; linear; genomic RNA; STD; VRL; 8372 BP. XX AC HQ852052; XX DT 30-OCT-2011 (Rel. 110, Created) DT 20-NOV-2017 (Rel. 134, Last updated, Version 3) XX DE Hibiscus green spot virus 2 isolate WAI 1-1 segment RNA1, complete DE sequence. XX KW . XX OS Hibiscus green spot virus 2 OC Viruses; Riboviria; Kitaviridae; Higrevirus. XX RN [1] RP 1-8372 RX DOI; 10.1094/PHYTO-01-11-0013. RX PUBMED; 21916557. RA Melzer M.J., Sether D.M., Borth W.B., Hu J.S.; RT "Characterization of a virus infecting Citrus volkameriana with citrus RT leprosis-like symptoms"; RL Phytopathology 102(1):122-127(2012). XX RN [2] RP 1-8372 RA Melzer M.J., Sether D.M., Borth W.B., Hu J.S.; RT ; RL Submitted (06-JAN-2011) to the INSDC. RL Plant and Environmental Protection Sciences, University of Hawaii, 3190 RL Maile Way, St. John 310, Honolulu, HI 96822, USA XX DR MD5; 75a54620a997d1ebf90276294cba5e5d. XX FH Key Location/Qualifiers FH FT source 1..8372 FT /organism="Hibiscus green spot virus 2" FT /segment="RNA1" FT /host="Citrus volkameriana" FT /isolate="WAI 1-1" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="Dec-2009" FT /db_xref="taxon:1513278" FT CDS 215..8152 FT /codon_start=1 FT /product="polyprotein" FT /note="contains protease, methyltransferase, helicase, and FT RNA-dependent RNA polymerase domains" FT /db_xref="GOA:G8DPJ7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:G8DPJ7" FT /protein_id="AER13445.1" FT /translation="MESFVLHKDSNKLRGKARAEYLKSGIRYLGRDKSGKKIFHRVSHT FT KYDIDHTGGDYSGSSFSGKSEDSATPGDAMAQSMWINMEGYSQEAKENIRRAADAAITH FT RNPLFESNAQAVFNSGIETVLQEKLKKRPIVLPHRVPSKVQQELVCKFVGMNMKFTSVL FT DHNHAVAAVLRVILQYYMLAELGYEKYDEMPSGYDSIVKDVGGNVLFHIKQEHIGVHSC FT FCDLGGRDCSRQAALNNYIRYHKCPSSPLHKHMCDSIQAGSTNVFCRSRGEVCHVRAPF FT MVFNHSAYDMTPEAIVDCMIAADSVKALISLHYNEDMFRGATSGKCEALDSEWHITKVN FT GRLYYNQVFRGCVQAYYTHDLAIYLSKFTTKAVLGGDNRAYIFEVKDVFMNTAIIEVNR FT LESNCLKGGRIHFPLPRTVPDDVHVLYTYDFMPGMVQQFLGAFTAATKWCLKPKRIEVS FT SVLFDQVMRYIATIDSAKFTITTVTKAVVALMSRRNIGGTYITGTSDSVRIAPKDMFSF FT CVTCYLIGYEWKYNATQCFTAVKGDIDWFRKRSASSGIVRCFSKLCDKLASKVFGDGCA FT SKTGKHVRNVGDLDKLTADEEVERRRLVGDSFGLLTKEDDLTLGEKIRSCFSYQVKVHR FT KFPIEVVTRDDTMFMTVEIPDMLLPDKPVMRGEVLTRDLMISADNLEDDSVYEDVVDSV FT YEKTDRPPSCCKLKCRVQSVAADSNCVFGAMVRVGVYPGCTVDGIKVRLRDSAHYDAVL FT DSIPEAESRSKEAFQRALCKDRAWATEHVLGLASLVFDIQFCIHRFDDSNGFVSVTLLG FT RASASRKVHLKFFDGHFEVLIVKDAIGLAELIDPTVDGEYFGEKELLRLVGSCKLLDAD FT RHSVNSLYGTSPGIYKSFSSCGKAELLYAISERYGVTDYRKALIIDPHEDDPLVALRAV FT NVNMPIVVIHALSRVLTKSHKRSSVVRLDTPIGHAECDMLAVVQQVFKTCKVGLCDFVY FT GDMARVPSFYPYREYKRVVTTADERANKALLAWSIVTKSGFVVFRFLGMEHMRPVIAML FT YGLFANVCFFKPNVVDGTDCECFLVCSGKVDEPETQPDSVADSVLHTYYCAMQEAYAAV FT MSGVGLVEIDKKSVESALSMNTLLGGGAILPTMSVVRNRVSGAASSSGFAPLLARLKAW FT VHESVLRVDYVRSNEAVVVNHGGGLRPKYYLDFEMDSKGCCYCDTCYSRGYEEFAESID FT IDLVYDGRGVCVVAGSASNRGYSLTQLKSVSVGTKDFSRVTYIWDGQCGDTGSFSADLL FT LFLQSYPTAVNEMLFVSPVLCDKGVLKFVLSLSYLFDTVNIKVVGTSHPSLMLLFRGKD FT VHFPKLHLGVGTVLKCSGADVDVSMLEQLFPKVNATGCEIQESVRIHSKSKNPRVRKAV FT EAHKKKVAATGVADVPMYPDSKLYVPERIRGKATLSRIADELKPEIEDNPIVGAVGVVE FT DDPLGEVDVSVRSVSTSDSMVTAPSTAGRNGLRDVVSVIKNELDRFAALDEAASYHAEM FT VSHDVSSLRGAADYIKNRFPRSRTAPTGAQWAKTKMPESVLNIYLKFNDKVGLIDATGK FT ILKHSEPRVAFEDISKVFDLAYEATVPLRGRDSAVDDLGFMHDRKDFQGCVGYYALFTS FT VTAHDQEPVLHQNSRALRLDRNVRGFLRDLKVEILDAAPGAGKTKYLVDNFTLRDMVVT FT STKENRDEFRERLKKRLSETGVLFDPSEVDARVRTLNGFLIDYGSKRKYKGANLISNDS FT YCFIDEANMYHAGDVFSVAFLYKVPVLHCVGDRRQIPFISRLPRVVTCHQIHKYCDVTL FT KPFNRSFRSPVDIVARIQRFYPHMPIIEAHNEIGLYEPSAKVISVGPDVAYTKDFIATF FT FGHDKAGKHNTSLLFFVKEDLFRFVERNPEYASLCCTVHQKQGCESDYIIVFRLSFPDK FT STYNDESQVVVALTRHRKGLVYATAGPDDRMKSVIENAPTLAEVKQHLPEDIRNKLAGG FT RQYSRDVYYKSVPSVSLMKGKSFFSIGTKKVLNVRNKWKYDIRLSPGFRTKEVLSAVTE FT NKEQIDRAGHLVLDAAILRRLDQQVLKPQIRRICDVLVYASGDSGELDSTIFRIMERDG FT CEHTPDPELSGDLKFVCDDEEYVLGEDVLEEQVEVEELDNMPVDVGDYVGHLQSAIGSC FT FPSCTYHLNQLDSFITYKFDLDLKLEDMSLQDIRFVSPDRKYECMVPVLSHSGPTFRTA FT CLVESLIAVGKRNRNVPKLDAECSPYIMADMLFDRFIDVYYRAEGFVPVHRGPKDVAEW FT CDGQENLVPDRVVGECSLYLQDLSVYNFITKGNPKVNLTDRSCEEFTAPQTVLFQGKDV FT NSMYCVIFRRIKKSLLKMLRISGKYFIYTDMDAIDFAAMLTKKVPPHMVKYSKALEIDI FT SKYDKSQGLIALLFECKIMRWFGVEEHLVQLWFDMHMCSRVDDRHTSLKFEVRLQRRSG FT DAATLLGNTMFLMAVIAYHYKVEEMDLCAFAGDDSLLIGANHLLDTDATEFTDLFNLEV FT KFFRYEYYHFCSKFLIPVGDRWYFVPDPVKLLVKLARCDLRNRVHIERYRVSYMDSVQF FT FCNDEVLLVLEKAVHERYVPSMCCRDWIKLLYYVAADPEMFDSLFEDPEGEPFPSGGML FT PRDR" XX SQ Sequence 8372 BP; 1888 A; 1306 C; 2398 G; 2780 T; 0 other; cataaattaa aacaggtgac tggttttgca agggttggtc aagtgttttt gagatatttg 60 ctttcgtgtt ttatcgagag ttgttgctgt ttgtttttgg acagcaatat tgtgttgaac 120 tcattgtttg ttgagttttg ttgccttcat tgtttgttga aggtttgcat cgaactattt 180 cgttcggttt ttggtcgttg attctttttc agcgatggaa tcttttgtac ttcacaagga 240 ttctaacaag ctccgtggca aggcccgcgc ggagtatttg aaatcgggta tccgttactt 300 gggtagggat aagagcggaa agaagatctt ccatcgtgtg tctcacacga aatatgatat 360 cgaccacact ggtggtgact actcaggttc gtctttttcg ggtaagtctg aggactctgc 420 tacacccgga gacgccatgg ctcaatcgat gtggattaac atggagggat attcgcaaga 480 ggctaaagag aacataaggc gtgctgcaga tgcggccatt actcatcgta atcctttgtt 540 cgagtctaat gcgcaagcgg ttttcaattc gggcattgag acggtactac aagagaaact 600 gaagaagcgc cctatagttt tgccacaccg ggtaccgtcc aaagttcaac aggaattggt 660 gtgtaagttt gtgggcatga atatgaaatt cactagtgtt ctcgatcata atcacgcggt 720 tgccgcggtt ctgcgagtta tattgcaata ttatatgctt gccgagttgg ggtatgagaa 780 atatgatgag atgcctagtg gatacgatag tatagtgaag gatgtaggag gtaatgtgtt 840 gtttcatatt aagcaggagc atattggagt gcatagttgt ttctgcgacc tgggtggtag 900 agattgttct agacaggctg cattgaacaa ctatattcgg taccataagt gtccgtcaag 960 tcctttgcac aaacatatgt gcgatagcat ccaagcggga tccacgaatg tgttttgtcg 1020 ttctcggggg gaagtttgtc atgtgagagc gccttttatg gtttttaacc attctgctta 1080 tgacatgact cctgaggcta tagtggattg catgattgct gcggattccg ttaaggcgtt 1140 gatatcgcta cattacaatg aggacatgtt tcgcggagct acaagtggta agtgtgaggc 1200 tttggatagt gaatggcaca ttactaaggt taacggtagg ctgtactata accaggtgtt 1260 tagaggttgt gtgcaggcat attacaccca tgatttggct atttatctgt ctaagtttac 1320 tacgaaggca gtgttggggg gtgataatag agcctacata tttgaagtga aggatgtgtt 1380 tatgaatacg gctattatag aggttaatcg tctggagtct aactgtttga agggtggtag 1440 gattcatttt cctctcccta gaacggtccc ggatgatgtt catgtcctct atacgtacga 1500 ttttatgcct ggtatggtac agcagttctt gggagcgttt actgctgcga ctaagtggtg 1560 tttgaagcct aagcggattg aggttagtag cgttttgttt gatcaagtga tgaggtatat 1620 tgctactatt gattctgcga agttcaccat tacgaccgtg acgaaggctg ttgttgcgtt 1680 aatgtcccgt aggaacattg gtggtacgta cattactggt acaagtgatt cggtgcggat 1740 cgcgcctaag gatatgtttt ccttttgtgt gacctgttat ctgattgggt acgaatggaa 1800 gtacaatgct actcagtgtt ttactgcggt gaaaggagac atagattggt tccggaagcg 1860 tagtgcgtcg tccggtatcg tgcggtgttt ttcgaagttg tgtgataagt tggcttctaa 1920 agtttttggt gatggttgcg cttccaagac gggtaagcac gttcggaatg taggtgatct 1980 ggataagttg acggctgatg aggaggttga gagacggcga cttgtcgggg actctttcgg 2040 tttgttgacg aaggaggacg accttacttt gggtgagaaa atacgttcgt gcttttccta 2100 tcaggttaag gtgcatcgta aattccctat tgaggtcgtt actcgggatg atactatgtt 2160 tatgactgtg gagattcctg atatgttgtt gccagataag ccggttatga gaggtgaggt 2220 gcttactcgt gatttgatga ttagtgcaga taatttggag gatgattcgg tgtatgagga 2280 cgttgtggat tcggtgtatg agaagactga tcgaccgccg tcatgttgta agttgaagtg 2340 tcgggttcag tcggttgcgg ctgacagtaa ttgtgtgttc ggtgcaatgg tgagggttgg 2400 tgtttaccct ggttgtaccg ttgatgggat taaggtcaga ttgagagatt ccgcgcacta 2460 tgatgccgtg ttggattcta ttccggaggc tgagtctaga tcaaaagaag cattccagcg 2520 tgcgttgtgc aaggatcgtg cgtgggctac tgagcatgtt ctgggtttgg cttcgttggt 2580 ttttgatatt cagttttgta ttcatcgatt tgatgattcc aacggtttcg tgtctgtcac 2640 gttgttagga agagctagtg cttcacgaaa agtccatttg aagttctttg atgggcattt 2700 tgaggtgttg atcgtgaaag acgctattgg tttggcggag ttgatcgacc cgactgtgga 2760 tggagagtat tttggagaga aggagctgct gcggcttgtt ggaagttgta agttgttgga 2820 tgctgatagg catagcgtta actctttgta cggcaccagt cctggtatat acaagagttt 2880 ttcgtcatgt ggtaaggctg agttgttgta tgcgatttcc gagcgttatg gtgtgactga 2940 ttatagaaag gcattgatca ttgaccctca tgaggatgat ccattggttg cgttgcgagc 3000 ggttaatgtg aatatgccta tagttgtcat tcatgctctt tcgagagtgt tgactaagtc 3060 gcacaaacgt tctagtgttg ttcggttgga tacgcctatc gggcatgctg agtgtgatat 3120 gttggctgtt gtgcagcagg ttttcaagac ttgtaaggtt ggattgtgtg attttgtgta 3180 tggtgatatg gctcgtgttc cttctttcta tccttataga gagtataaga gagtggttac 3240 tactgctgac gaaagggcaa ataaggcgct gctggcttgg tccattgtta ccaagtctgg 3300 ttttgtggtg tttaggtttt taggtatgga gcatatgcga cctgttatcg cgatgttgta 3360 tggtttgttc gctaatgttt gtttctttaa acctaatgtt gttgatggta cggactgtga 3420 gtgttttctt gtgtgttctg gtaaggttga tgaacctgag acgcaaccgg attctgtcgc 3480 tgatagtgtt ttacatacgt attattgtgc tatgcaagaa gcgtatgctg ctgttatgtc 3540 gggagttggt ctggttgaga tcgacaagaa aagtgtcgag tcggctttaa gtatgaatac 3600 acttttgggt ggtggtgcta tactgcctac catgtccgta gttcgtaatc gagttagtgg 3660 tgcagcgtct tcgtctggtt ttgctcctct tttggctaga ttgaaggctt gggttcacga 3720 gagtgttttg cgcgttgact atgttcgtag taacgaggct gtggtggtta accatggtgg 3780 tggattgcgt cctaaatact atttggattt cgagatggat agtaagggtt gttgttactg 3840 cgatacttgt tattcgcgtg gatatgagga gtttgcggag agtattgata tagatttggt 3900 ctacgatggt cgtggtgtgt gtgtggtcgc tggttcggct tctaaccgcg ggtactcgct 3960 gacgcagttg aagtctgtgt ctgttggtac aaaggatttc tctagagtta cttatatctg 4020 ggatgggcaa tgtggtgaca ctggttcctt ctcggctgat ttattgttgt tcttgcagag 4080 ttatcctact gcggttaatg aaatgttgtt tgtgtcgccg gttttgtgtg ataaaggggt 4140 gcttaagttt gtgctttctc tgtcatattt gtttgacaca gtgaacatta aggtggttgg 4200 tactagtcat cctagtctta tgttgttgtt tagaggaaag gatgttcatt ttcctaagct 4260 acatcttgga gttggaacgg tgttgaaatg ttctggggcg gatgttgatg tttcgatgtt 4320 ggagcaattg tttcctaagg tgaatgctac gggttgtgag atacaagaga gtgtgaggat 4380 tcacagtaag tctaaaaatc cccgtgttag gaaagctgtt gaggctcata agaagaaggt 4440 ggccgccact ggtgttgctg acgttccgat gtaccctgat tccaaacttt atgttccgga 4500 gaggattaga ggtaaggcga ctttgagtag gattgctgat gagttgaagc cggagataga 4560 ggataacccg atcgtcggtg ctgtgggagt tgttgaggat gatccgcttg gtgaggttga 4620 tgtgtctgtg cggtctgttt cgacttctga ttctatggtt actgccccgt ctactgctgg 4680 ccggaatggt ttgcgtgacg tggtgtctgt gatcaagaat gagttggaca ggttcgctgc 4740 tttggatgag gctgcaagtt accatgcgga gatggttagt catgatgttt cgtcgcttcg 4800 gggggcggct gactacataa agaataggtt tccccggtct aggacggcgc ctacgggtgc 4860 acaatgggcg aagactaaga tgcctgagag tgttttgaat atatacctta agtttaatga 4920 taaggtcggt cttattgatg cgacgggaaa aatactgaag catagtgaac ctagggttgc 4980 gtttgaggac atatcgaagg tgtttgatct ggcttatgaa gctactgtgc ccttgagagg 5040 tcgtgactct gcggtcgatg acttgggctt tatgcatgac cggaaggatt ttcaaggttg 5100 cgtaggttat tatgcattgt ttacgtctgt gactgcgcat gatcaagagc cggtattgca 5160 ccaaaacagt agggctttgc gcctagacag gaatgtgcgt ggatttttga gagatttgaa 5220 ggtggagatt ttggatgctg caccaggtgc agggaagacc aagtacttag tggacaattt 5280 cacattgcgc gatatggttg tcacttccac taaggaaaat agagacgagt ttagggagag 5340 attgaagaag aggttgagtg agacgggtgt attgtttgat ccgtcggagg tagatgctcg 5400 agttaggacg ttgaacgggt tcttgataga ttacggatcc aagcggaagt acaaaggtgc 5460 taacctgata agtaacgatt catattgttt tatcgacgag gctaatatgt accacgctgg 5520 tgacgttttc tctgttgcat ttttgtacaa ggtccccgtt ttacattgtg ttggtgatcg 5580 tcggcagatt ccctttattt ctaggttgcc cagagttgtg acttgtcatc agattcataa 5640 gtactgcgat gttactttga agccttttaa taggtcgttc aggtccccgg tggatattgt 5700 ggcgcgtatt cagcgatttt atcctcatat gcctattatt gaggcacata atgagatagg 5760 attgtatgaa ccatcggcca aggttatttc ggtggggccc gatgttgctt atactaagga 5820 tttcatcgct acattcttcg gtcacgacaa ggctgggaaa cacaacacgt cgttgttgtt 5880 ttttgtgaag gaggatttgt ttaggttcgt ggagaggaat cctgaatatg ctagtttgtg 5940 ttgtactgtt caccagaagc aaggttgtga gtctgactac ataattgttt tcagacttag 6000 tttccctgat aagagtactt acaacgatga atcgcaggtg gttgtcgctc ttactaggca 6060 taggaagggt ttggtttatg ctactgcagg tcccgatgat cgtatgaaga gtgttattga 6120 gaatgcgcct actttggcgg aggttaagca gcatttacct gaggatatta ggaataagtt 6180 ggctggaggc agacagtatt ctagggacgt gtactacaag tctgtaccgt ctgtgagtct 6240 catgaagggg aaatctttct tctcgattgg gactaagaag gtgttgaatg ttcgcaacaa 6300 gtggaaatac gatattaggt tgtcaccagg gttccgtact aaggaggttt tgagtgctgt 6360 gactgagaac aaggagcaga ttgatcgtgc aggacatctt gtcctggatg ctgctatttt 6420 gcgtaggttg gatcaacaag tgttgaagcc tcagattaga cgtatttgtg atgttttggt 6480 ttatgcgtct ggggattctg gtgagttgga ttccactatt tttaggatta tggagcgtga 6540 tggttgtgaa catacgcctg atcccgaact gtctggtgat ctgaagtttg tttgtgacga 6600 cgaggagtat gttttaggtg aagatgtttt ggaagagcaa gttgaggttg aagagttgga 6660 caatatgcct gtagacgttg gtgattatgt tggtcatctg cagtcagcta ttggttcttg 6720 ttttccttct tgtacgtacc atttgaatca gcttgattcc tttattacat acaagttcga 6780 tttggatttg aagttggagg atatgagttt acaagacata cgttttgtat cccctgatag 6840 gaagtacgaa tgtatggtgc ccgtgttgtc tcattctggg cccacttttc gtacagcgtg 6900 tcttgtggag agtttgattg ctgtgggaaa aaggaacagg aacgtgccga aattggatgc 6960 ggaatgtagt ccgtatatta tggctgacat gttgtttgat cgttttattg atgtgtacta 7020 cagggctgag ggatttgtgc ctgtgcatcg cgggcctaaa gatgttgctg agtggtgtga 7080 cggtcaggag aatttggtgc cggatagggt agttggagaa tgttcgttgt atttacagga 7140 tttgtctgtg tacaacttta ttactaaagg aaatccgaag gttaatctta ccgatcggtc 7200 atgtgaagag ttcactgcac cgcagactgt gttgttccaa ggaaaggacg taaattcgat 7260 gtattgtgtg attttccgac gcataaagaa atcattgttg aagatgttga ggatctcggg 7320 taagtatttc atatacactg atatggacgc gatagatttc gcggctatgc ttactaagaa 7380 agttcctcct catatggtta agtacagtaa ggcattggag atagatattt ctaagtacga 7440 taagtctcag ggacttattg ctttgctgtt tgagtgcaag attatgcgtt ggtttggtgt 7500 ggaagagcat cttgttcaac tgtggttcga tatgcatatg tgttctagag ttgatgatcg 7560 gcatacttcg ttgaagtttg aggtgaggtt gcagcggcgt agtggtgatg cggctacttt 7620 gttgggaaat actatgtttc ttatggccgt aattgcttac cactacaagg ttgaagagat 7680 ggatttgtgc gcctttgctg gtgatgattc gcttctgata ggtgcgaacc acttattgga 7740 tactgatgct acagaattca ctgatttgtt caatttggag gtaaaatttt ttaggtacga 7800 gtactatcat ttctgttcaa aatttttgat accagtgggt gaccggtggt attttgttcc 7860 tgatccggtg aaattgcttg ttaaactggc tagatgtgat ttgcggaata gggttcatat 7920 tgagcggtat agagtctcgt atatggattc ggtgcagttc ttttgtaatg atgaagtgtt 7980 gttggtgttg gagaaggccg ttcatgaacg gtatgtacct agtatgtgtt gcagggattg 8040 gattaagtta ttgtactatg tggctgcgga tcctgagatg tttgattcgc tgtttgaaga 8100 tccagaaggg gaaccgtttc cctccggagg tatgttgcct agagataggt aacttgtgtg 8160 tttgtttatg tattgtttgt ttgtgtgtgt gtgtgtcagc ggcgagtttc ttccgcgttc 8220 ttctcgtcgt gttctggtga acgcgtgaat ttgggttttg tgggccctta ggtttaaagt 8280 ccttaaatat tagttagttt cttatatcgt tggttagtat gtcctcgttt gtcttttctt 8340 ttcttctttt ccgcaaaaaa aaaaaaaaaa aa 8372 //