ID HQ847905; SV 1; linear; genomic RNA; STD; VRL; 3766 BP. XX AC HQ847905; XX DT 31-JUL-2011 (Rel. 109, Created) DT 31-JUL-2011 (Rel. 109, Last updated, Version 1) XX DE Baboon orthoreovirus segment L3, complete sequence. XX KW . XX OS Baboon orthoreovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus. XX RN [1] RP 1-3766 RX DOI; 10.1128/JVI.00729-11. RX PUBMED; 21593159. RA Yan X., Parent K.N., Goodman R.P., Tang J., Shou J., Nibert M.L., RA Duncan R., Baker T.S.; RT "Virion structure of baboon reovirus, a fusogenic orthoreovirus that lacks RT an adhesion fiber"; RL J. Virol. 85(15):7483-7495(2011). XX RN [2] RP 1-3766 RA Goodman R.P., Shou J., Duncan R., Nibert M.L.; RT ; RL Submitted (05-JAN-2011) to the INSDC. RL Department of Microbiology and Molecular Genetics, Harvard Medical School, RL 200 Longwood Avenue, Boston, MA 02115, USA XX DR MD5; 687a030fd44c8016532fe6b129020cc3. DR EuropePMC; PMC3147939; 21593159. XX CC GenBank Accession Numbers HQ847903-HQ847908 represent the complete CC genome of Baboon orthoreovirus. XX FH Key Location/Qualifiers FH FT source 1..3766 FT /organism="Baboon orthoreovirus" FT /segment="L3" FT /host="Papio cynocephalus" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="Nov-1993" FT /db_xref="taxon:75888" FT gene 20..3715 FT /gene="lambdaC" FT CDS 20..3715 FT /codon_start=1 FT /gene="lambdaC" FT /product="core shell protein" FT /db_xref="GOA:G0YZM1" FT /db_xref="InterPro:IPR013087" FT /db_xref="UniProtKB/TrEMBL:G0YZM1" FT /protein_id="AEK86191.1" FT /translation="MPPNRVRNRTIRRKVNEPVSLNDKVKEHDFSRDGGQIEKATAGST FT TNEDSNDVQIKKISEPTSQKAHQDIEDNELVKNQIVPSHKNDEDGGLEDVTQKSQQLSL FT LNQQKPITGITPKQTEQYVCPICMRAFMSREQLDVHQLTHSIGVSSGLVNYDTQKLILE FT FIESWSNATTTANNKSRLSNAEVSALMMTVSPLMITWDSGLATSFKLVPIVNAPTVQDV FT ISYTWFSSSYNLPTPFPQASVVRIVLHTNWASMIDNSRNLPLIIPPPTTSNVMLFRELL FT TTDITPSGCFNPRILRANAIMMSVKFVLDNLHLNANTSYTLDMSAALVPSLGSKYLRVI FT DSNNSDKWYSIMYPSRLKLPNLSKTSEFVNYCIDDRVGRYDKAQIFSGAMAEWADTFET FT CDSLTLYIRDRWLLRLEELNISPAELAQGLTRCAKNLVTITAPTAPSSMRMMPFKVTNM FT ERQLHQIMLFMNIGNNADAIEPIISNAAQVLSRVSPLNINPKLVSDSISAIVESTTNSI FT SPAAALLNRLRPQMSDFSDFRRACISILYNGLCTTYLDEASFPSQRGNVLDVNTLVDMF FT TCLNALLLTTDPNAPIKAFMTVANAMYGFENIHMDDPNWNQQMNAAAFNAPSLWPQCFI FT HRTIDRRQCPILYNWCNTIHEFWPRPSQTTFGAPDVFGSANLFTDPGVLLLPFQYTPAS FT TVTPTLNLLNEMCNWRNAVIDLLLAIINDGRLTLSWNPAMRSSMANALVKFKIIKSYTP FT AYIAELLPLELSAIAPALPIQPFQVPFCGLNRDQIPVKMNISRQAPNIMSQPNLHISMT FT QQFIGVPIRVNARAITVALLSGLYLEGEPLITNVWYADALTPLYTNDSLFANAQQAVIA FT SEAYQTSMVCIGQCANVNNIMDHPFDWLPEIEFGANEAASMAKTINNYFLEAFDLPDDS FT ILIQPFLEGDPRASQITVSYEQYNGLVVKVTPEFKESMIADSTLMVGDVMRHEYNIFGL FT CRGDIIIGQYLTESGFNPLAPPAELIFSRDDDDVHIFSDRTVASFGMNGNEMTVEDADG FT NFIPLRGKWIMPLRLWQINHAFFSTILPNRIRSGHLFIRIELGAYPYTLQYFNGRDQMD FT GFSVFTQWMSMMSSMGMAPVPFLMPESMDHDVSSGLSIHYIWATEFNDGSLFCTNSASP FT YTIFGPDRSIPLERFSILTNDDIEIKSNQLPEKIDFYGLVRRHNFETPPLSAMVTTYGT FT GLPHYI" XX SQ Sequence 3766 BP; 1113 A; 711 C; 738 G; 1204 T; 0 other; gtaaatttct ccttaaggca tgcctcctaa tagagtcaga aaccgtacca tacgtcgtaa 60 ggtgaatgag cctgtttcat tgaatgataa agtgaaagaa catgatttct cccgtgatgg 120 tggccaaatt gagaaggcta cagctggaag tactactaat gaggattcaa atgatgtaca 180 gattaaaaag atttctgaac ctacgagcca aaaagcacat caggacattg aagataatga 240 attagttaag aatcaaatag ttccaagtca taagaatgat gaggatggtg gacttgagga 300 cgttactcaa aaaagtcagc agttatccct attaaaccag caaaagccga ttactgggat 360 tactcctaaa caaactgagc agtatgtttg ccccatatgt atgcgtgcat ttatgtcacg 420 tgaacaatta gacgtccatc agttgacaca ttctattggt gtttcttcag gattggttaa 480 ctatgatact caaaaactta ttttggaatt tatcgaatct tggagtaatg cgactacgac 540 cgcgaataat aaaagtagat tatcaaatgc tgaagtaagc gctttaatga tgacagtttc 600 tcctttaatg ataacatggg atagtggatt ggcaacttca tttaaattgg ttccaattgt 660 caacgctcct acagttcaag atgtgataag ctacacttgg ttttcatcat cgtataattt 720 gccaactcct tttcctcaag ctagtgtcgt ccgcattgtt ttacatacga attgggcaag 780 tatgattgat aactcacgta acctaccatt gatcatacca ccaccaacaa catcaaatgt 840 tatgctgttt agagaattgt tgactactga tattactcca tcaggttgct tcaatccacg 900 tatattgcga gctaatgcca ttatgatgtc tgtgaagttt gtgcttgata atttgcattt 960 gaatgctaat acttcatata ctcttgatat gtcagctgct ttagttcctt cgcttggttc 1020 taaatatttg agagttattg attcgaataa ttcagataaa tggtattcta taatgtatcc 1080 ctctcgactc aaattaccaa atttatctaa gacctcagaa tttgttaatt attgcattga 1140 tgaccgcgtt ggtcgttatg ataaagctca aattttcagt ggtgctatgg cagaatgggc 1200 ggataccttt gaaacttgtg attcattaac attgtatata cgtgatagat ggttactaag 1260 attagaggaa ttgaatattt caccagccga gctagctcaa ggtttaacga ggtgtgcgaa 1320 gaacttggtc actattactg ctcccaccgc tccctcatcc atgcgtatga tgccttttaa 1380 agtgacaaat atggagagac aacttcatca gattatgtta ttcatgaata ttggaaataa 1440 cgctgatgcg atagaaccga ttatatcaaa tgcggctcaa gttctatcac gagtatcgcc 1500 actcaatatt aatcccaagt tagtgtccga ttcaatatca gccatcgtag agagcactac 1560 taattccatt agtcccgccg ctgcactact taataggtta agacctcaga tgtccgattt 1620 ttcagacttt cgtagagctt gtatcagcat attgtataat ggcttatgta ctacttactt 1680 agatgaagct tcatttccat cgcaacgcgg taacgtgcta gatgttaata ctttagttga 1740 catgtttaca tgtttaaatg ctttactatt aaccacagat ccaaatgcac caattaaagc 1800 ttttatgact gttgctaacg ctatgtatgg atttgaaaat atacatatgg atgatccaaa 1860 ttggaatcag caaatgaatg ctgccgcgtt caacgctccc tctttatggc cacaatgctt 1920 tattcaccgt accatcgata ggagacaatg tcctatactt tataattggt gtaatactat 1980 tcatgaattt tggccaagac caagtcagac tacttttggt gcgccagatg tatttggtag 2040 tgcaaatcta ttcactgacc ccggtgtatt gctattacca ttccagtata ctccagcgag 2100 cacggtgact ccaactctta acttgttgaa tgaaatgtgt aattggcgca atgctgtgat 2160 agatctatta ttagctatta ttaatgatgg tcgattgact ttgagttgga atccagctat 2220 gcgatcctca atggcaaacg ctttggtgaa attcaaaata attaaatcat acactcccgc 2280 atatattgct gaattgttgc ctttagagct tagcgccatc gctccagctt tacctattca 2340 accatttcaa gttccctttt gtgggttaaa ccgagatcag attccagtta aaatgaatat 2400 ctcgcggcaa gctccaaata tcatgtcaca accaaattta catatttcga tgacgcaaca 2460 gtttataggt gttcctattc gcgttaatgc acgagctatt acagtagctt tattatctgg 2520 actatattta gagggtgaac cattaattac taatgtttgg tatgctgatg ctctaacacc 2580 actatacaca aatgattcat tatttgctaa tgcgcagcaa gcggtaatcg ctagtgaagc 2640 ttatcaaact tccatggtat gcattggtca atgtgcaaat gtgaataata ttatggatca 2700 tccatttgat tggttacctg agattgagtt cggtgctaat gaagcagctt caatggctaa 2760 gacgattaac aattacttct tagaagcatt tgatttacct gatgattcga ttctgattca 2820 gcctttcctt gaaggtgatc caagggcatc acaaatcact gtatcttatg aacagtacaa 2880 tggcttagtg gtaaaggtta ctcctgaatt caaagaatct atgatagctg attcgacttt 2940 aatggttggg gatgttatgc gtcatgagta taatatattc ggtttgtgcc gtggagacat 3000 tattataggt cagtatttaa cagagtctgg atttaatcct ttagctcctc ccgctgagct 3060 tattttcagt agagatgatg atgatgtgca cattttttct gataggactg ttgcatcatt 3120 tgggatgaat ggtaatgaaa tgactgtgga ggatgcggac ggtaatttta tcccgctacg 3180 cggaaaatgg atcatgcccc tgcgactatg gcaaattaat catgctttct tttcaacaat 3240 attacctaac cgtattagat caggacattt atttattaga atcgaattgg gcgcttatcc 3300 ctacacgctg caatatttca atgggcgtga tcaaatggat ggattcagtg tatttacaca 3360 atggatgtca atgatgagtt cgatgggaat ggctcctgta cccttcttaa tgccagaatc 3420 catggatcat gacgtatcct ctgggcttag cattcattac atctgggcta ctgaatttaa 3480 tgatggttca ttattctgta cgaattcagc gtcaccatat actattttcg ggccagatag 3540 gagtatccca ctggaaaggt tttccattct gacaaatgat gatatagaga taaagtcaaa 3600 tcagttacca gagaaaatag acttttatgg attggttcga cgtcacaact ttgaaacgcc 3660 accattaagc gcgatggtta cgacatatgg tactggactg cctcattata tttaggatga 3720 ccgccgggga gtcaatatga cagaaccggt ttggagatca ttcatc 3766 //