Dbfetch

Dbfetch

ID   HQ847531; SV 1; linear; genomic RNA; STD; VRL; 910 BP.
XX
AC   HQ847531;
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DT   19-SEP-2011 (Rel. 110, Created)
DT   19-SEP-2011 (Rel. 110, Last updated, Version 1)
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DE   Sweet potato chlorotic stunt virus isolate Bitambi_RNA1 p7 gene, partial
DE   cds; and p22 gene, complete cds.
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KW   .
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OS   Sweet potato chlorotic stunt virus
OC   Viruses; Riboviria; Closteroviridae; Crinivirus.
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RN   [1]
RP   1-910
RX   DOI; 10.1016/j.virusres.2011.01.010.
RX   PUBMED; 21262288.
RA   Cuellar W.J., Cruzado R.K., Fuentes S., Untiveros M., Soto M., Kreuze J.F.;
RT   "Sequence characterization of a Peruvian isolate of Sweet potato chlorotic
RT   stunt virus: further variability and a model for p22 acquisition";
RL   Virus Res. 157(1):111-115(2011).
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RN   [2]
RP   1-910
RA   Cuellar W.J., Cruzado R.K., Fuentes S., Untiveros M., Soto M., Kreuze J.F.;
RT   ;
RL   Submitted (04-JAN-2011) to the INSDC.
RL   Integrated Crop Management Division, International Potato Center (CIP), Av.
RL   La Molina 1895, Lima L12, Peru
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DR   MD5; 7bbcaff81a8388ad40b6e9a87e724825.
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FH   Key             Location/Qualifiers
FH
FT   source          1..910
FT                   /organism="Sweet potato chlorotic stunt virus"
FT                   /strain="EA"
FT                   /isolate="Bitambi_RNA1"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda"
FT                   /db_xref="taxon:81931"
FT   CDS             <1..83
FT                   /codon_start=3
FT                   /product="p7"
FT                   /db_xref="GOA:G3EHI8"
FT                   /db_xref="UniProtKB/TrEMBL:G3EHI8"
FT                   /protein_id="AEO37521.1"
FT                   /translation="VIGFFTFNIILLFVYCLLSIRIRRSY"
FT   CDS             239..814
FT                   /codon_start=1
FT                   /product="p22"
FT                   /db_xref="UniProtKB/TrEMBL:G3EHI9"
FT                   /protein_id="AEO37522.1"
FT                   /translation="MSSGAIYSELNRFLKYLRELDFSNFCFSDFLFRFSSLKSLIDEYS
FT                   SHWLVNTNELVWYRTICEQRLHPHPFDANRLLTRINVSDLKHDLIMIRDHFSSIDDFLN
FT                   KYPAIPILVSFTKNISAFLEDNEWESVIHHTDSLNRLVFRESWSDGYGYVNHHRLSASS
FT                   HDFQHMKLCDIFRLSKDKLNSGVFTFLL"
XX
SQ   Sequence 910 BP; 248 A; 130 C; 175 G; 357 T; 0 other;
     ctgttattgg attttttact tttaatatta ttttattgtt tgtatattgc cttttgagta        60
     ttagaattag aaggtcttat taattagtta tcgtagataa gtggaataga gtgaaaaact       120
     actgtaattg attattgtga tgtgtcacaa ctcacaattt aattgattca gtccaacctg       180
     cactagtttg cggcgagggt ggttgttcgc tcggttttat tatctatttc tttgaacgat       240
     gagttctgga gcaatttact ctgaacttaa tcgttttctt aagtatctta gggagttaga       300
     ttttagtaat ttttgtttta gtgatttttt gtttcgtttt tcttccctaa aatcactaat       360
     cgatgagtat agtagtcatt ggttagtaaa tacgaatgaa ttagtctggt atagaacaat       420
     ctgtgagcaa cgattgcatc ctcatccttt cgatgcaaac aggttgttaa cacggataaa       480
     tgtttcagat ttgaagcatg acttgataat gattcgtgat catttttcga gtattgatga       540
     ttttctaaac aagtatccgg ctataccaat tcttgtctca ttcaccaaaa atattagtgc       600
     gtttttagaa gataatgagt gggaatccgt tattcatcat acggactcac tcaatcgtct       660
     tgttttccga gagtcgtggt cagacggtta tggttacgtt aaccaccatc gtctttcagc       720
     gtcgtcgcat gattttcaac atatgaagtt atgtgatatt tttcgtttgt cgaaggataa       780
     gttgaacagt ggtgtgttca ctttccttct ttaatgtttt cttttagtat attaataaaa       840
     atcgataaag atattagggt agatttgatt aatgtttata ccctagagtc gtacacctga       900
     gagattcgga                                                              910
//