Dbfetch

Dbfetch

ID   HQ844200; SV 1; linear; genomic RNA; STD; VRL; 1065 BP.
XX
AC   HQ844200;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
XX
DE   Sweet potato virus G isolate Shaanxi3 coat protein gene, partial cds.
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KW   .
XX
OS   Sweet potato virus G
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1065
RX   DOI; 10.1007/s00705-012-1503-8.
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
XX
RN   [2]
RP   1-1065
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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DR   MD5; 6096b45d1b66532e5f5bd3a558d2be32.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1065
FT                   /organism="Sweet potato virus G"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Shaanxi3"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:46619"
FT   CDS             <1..>1065
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCQ4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCQ4"
FT                   /protein_id="AEG80035.1"
FT                   /translation="SAEEIYDAGKTGNTGRGRGRGTVPPPPPPPGVPRTGDLPPAVQTG
FT                   PLPPGAASKPPIIEEIPQPESPRAKALREVREKAPATIPDSRGVDTSQIPSFTPGRDQT
FT                   MTPTPQRTSTGVRDRDVNAGTVGTFIVPRLQITHSKKRAPMANGRIVVNLDHLTIYDPE
FT                   QTSLSNTRATQEQFNAWYEGVREDYGVNDEQMGILLNGLMVWCIENGTSPNINGMWVMM
FT                   DGDEQVTYPIKPLLDHAVLTFRQITTHFSDIAEAYIEKRNRIKAYMPRYGLQRNLTDMS
FT                   LARYAFDFYELHSNTPVRAREAHMQMKAAALKNAQNRLFGLDGNVSTQEEDTERHTTTD
FT                   VTRNIHNLLGMRGVQ"
XX
SQ   Sequence 1065 BP; 351 A; 222 C; 273 G; 219 T; 0 other;
     tctgctgaag agatatatga tgcaggaaaa acaggaaaca caggaagggg aagaggacga        60
     ggtactgtgc ctccgccgcc gccaccccct ggggtaccaa gaacaggtga cctgcctcca       120
     gcagtgcaga caggaccatt accaccaggt gcagcctcaa aaccacctat cattgaggaa       180
     attccgcagc cagagtcacc gagagcgaag gcattgcggg aagtgagaga gaaagctcca       240
     gcaacaattc cagatagtag aggggttgat acatcacaaa taccgagttt cacaccaggt       300
     agagaccaaa caatgacacc aacccctcaa agaacaagca ctggagtgag agatagagat       360
     gtgaatgctg gtacggttgg aactttcata gtgccacggc tccagataac acatagtaag       420
     aaaagagcac caatggcaaa tggaagaata gtagtcaatc ttgaccactt gacaatctat       480
     gaccctgaac aaacaagtct ttcaaatact cgagcaacac aggaacaatt taatgcttgg       540
     tacgagggtg tcagggaaga ttatggagtg aatgatgagc aaatggggat attgctcaat       600
     gggttaatgg tttggtgcat cgagaatgga acatccccga atattaatgg aatgtgggtc       660
     atgatggatg gtgatgaaca agttacatat ccaataaaac ctctattgga tcatgctgtc       720
     ctcacattta ggcagataac gacacacttt agcgatatcg ctgaagcgta tattgaaaag       780
     cgcaatagga tcaaggcata catgccgagg tatggtctac aacgaaactt gactgatatg       840
     agtcttgcgc gatatgcgtt cgatttctat gagctgcact cgaacactcc tgttcgggcc       900
     agagaggcac atatgcaaat gaaagcagca gcacttaaga acgcacaaaa tcggttgttt       960
     ggtttggacg gaaacgtctc cacgcaggaa gaagatacgg agaggcacac aacgactgat      1020
     gttacaagga atatacataa cctcttgggt atgaggggtg tgcag                      1065
//