ID   HQ842628; SV 1; linear; genomic RNA; STD; VRL; 887 BP.
XX
AC   HQ842628;
XX
DT   20-NOV-2011 (Rel. 110, Created)
DT   20-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Umatilla virus isolate USA1969/01 segment 10, complete sequence.
XX
KW   .
XX
OS   Umatilla virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-887
RX   PUBMED; 21897849.
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.;
RT   "Umatilla virus genome sequencing and phylogenetic analysis: identification
RT   of stretch lagoon orbivirus as a new member of the Umatilla virus species";
RL   PLoS One 6(8):E23605-E23605(2011).
XX
RN   [2]
RP   1-887
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.C.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Arbovirus Molecular Research Group, Vector Borne Disease Programme,
RL   Institute for Animal Health, Pirbright Laboratory, Ash Road, Pirbright,
RL   Woking, Surrey GU24 0NF, United Kingdom
XX
DR   MD5; aa55f66d06bdab77d7b9dbaaffe68624.
DR   EuropePMC; PMC3163642; 21897849.
DR   EuropePMC; PMC3236047.
XX
CC   GenBank Accession Numbers HQ842619-HQ842628 represent sequences
CC   from the 10 segments of Umatilla virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..887
FT                   /organism="Umatilla virus"
FT                   /segment="10"
FT                   /host="bird"
FT                   /isolate="USA1969/01"
FT                   /serotype="1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="pool of Culex pipiens mosquitoes"
FT                   /collected_by="John Lazuick, Arbovirus Disease Section, Ft.
FT                   Collins, USA"
FT                   /collection_date="Jul-1969"
FT                   /db_xref="taxon:40060"
FT   CDS             17..811
FT                   /codon_start=1
FT                   /product="NS3"
FT                   /db_xref="GOA:G8DP11"
FT                   /db_xref="InterPro:IPR002565"
FT                   /db_xref="UniProtKB/TrEMBL:G8DP11"
FT                   /protein_id="AEE98377.1"
FT                   /translation="MLEAAERAQERSKATESETVREDSDNDSMSKGLLTETVLRDTKRG
FT                   LGRPVTQLTFVDELSGGQGFMYQQLQDKAQALNILTNAVTSTTGANDTLKNEKAVFGAT
FT                   SDALKDDPFTRYTKQLAYETTISQILGQMATKRRKMLILDVVKYMLGIILLMLLLWNMI
FT                   VESIEEESYKEVLSGMFGKNNNDTQALFSAARAIRRYTSYLEMISSIAMTFVVRKIMQL
FT                   GVKLKALERDKIKREAYNKTVARVSHSGICSPSAPTLESTER"
XX
SQ   Sequence 887 BP; 309 A; 155 C; 215 G; 208 T; 0 other;
     gtttaaaatc tcaaagatgt tggaagctgc tgagcgtgca caagaacgga gtaaagcaac        60
     ggaatcagaa acggttagag aagacagtga taacgattca atgtcgaaag gtttattgac       120
     agaaacggtt ttaagagata ctaagagagg tttaggacgg ccagtgacac aactaacctt       180
     tgttgacgaa ttatcgggag gacagggctt catgtaccaa caactgcaag ataaggcgca       240
     ggcgctaaac atacttacta atgcggtaac ctcaacaact ggagcaaacg acacccttaa       300
     aaatgaaaaa gcggtttttg gagcgacgag cgacgcactt aaggatgatc cttttacgag       360
     atacacaaag cagcttgcgt atgaaacaac gatcagccag attctgggcc aaatggcgac       420
     gaaaaggcgg aaaatgctaa tactggatgt tgtgaaatat atgttaggga taattttact       480
     aatgttatta ctttggaata tgatcgttga gtccatcgag gaagaaagct ataaggaagt       540
     attgtcagga atgttcggta aaaataataa tgatacacaa gctttattta gtgcggcgcg       600
     agcaatcaga agatatacat catatttaga aatgatttca agtattgcaa tgacctttgt       660
     agtgcgcaaa ataatgcagt taggcgtaaa attgaaagcg ttagaaagag ataaaattaa       720
     aagagaagcc tacaacaaaa cagtcgcccg tgtatctcac tccggaattt gctcgccttc       780
     agcgccaaca ttggaaagta cggaacggta gacactggat cgcggactgg cacggtcgat       840
     ctaagactac cggacgtatg tcgctacgtc gttgagatta aggatac                     887
//