ID   HQ842627; SV 1; linear; genomic RNA; STD; VRL; 1103 BP.
XX
AC   HQ842627;
XX
DT   20-NOV-2011 (Rel. 110, Created)
DT   20-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Umatilla virus isolate USA1969/01 segment 9, complete sequence.
XX
KW   .
XX
OS   Umatilla virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1103
RX   PUBMED; 21897849.
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.;
RT   "Umatilla virus genome sequencing and phylogenetic analysis: identification
RT   of stretch lagoon orbivirus as a new member of the Umatilla virus species";
RL   PLoS One 6(8):E23605-E23605(2011).
XX
RN   [2]
RP   1-1103
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.C.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Arbovirus Molecular Research Group, Vector Borne Disease Programme,
RL   Institute for Animal Health, Pirbright Laboratory, Ash Road, Pirbright,
RL   Woking, Surrey GU24 0NF, United Kingdom
XX
DR   MD5; f6a4775943c68a33db444ab2e1467e8d.
XX
CC   GenBank Accession Numbers HQ842619-HQ842628 represent sequences
CC   from the 10 segments of Umatilla virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1103
FT                   /organism="Umatilla virus"
FT                   /segment="9"
FT                   /host="bird"
FT                   /isolate="USA1969/01"
FT                   /serotype="1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="pool of Culex pipiens mosquitoes"
FT                   /collected_by="John Lazuick, Arbovirus Disease Section, Ft.
FT                   Collins, USA"
FT                   /collection_date="Jul-1969"
FT                   /db_xref="taxon:40060"
FT   CDS             43..1068
FT                   /codon_start=1
FT                   /product="helicase"
FT                   /note="VP6"
FT                   /db_xref="GOA:G8DP10"
FT                   /db_xref="InterPro:IPR001399"
FT                   /db_xref="UniProtKB/TrEMBL:G8DP10"
FT                   /protein_id="AEE98376.1"
FT                   /translation="MRIVLLAPGDIIEKSEPELKQRGIDIKIKDWRKDGGSHVPSTERE
FT                   NGGTGKDGESATPGSSGSNGHVGRDGEKSKGNGKEENDSRPGDSRCVRTDDERITKTEI
FT                   KDGDGDKSGDKQSASAKDSKDAEGDERSADSTVVKGKKIKENEGTDPKITKQLAAERSI
FT                   DGDGPSGSVYVLTRAVADAINQRSGKQLDVLATLSDLNGKGKCYQISGGVGKIIGLDND
FT                   AVKEQIDALNELKSQYDGPNVNALLKRVLRIESSSKLDQMFPKNVDEKQTIGSGVVLAT
FT                   NDPSFLPQSNALFTCPTGDTNWKEVARQATNKTSIRAYTYSEIGSGSEIKEAFLSLIDS
FT                   L"
XX
SQ   Sequence 1103 BP; 398 A; 188 C; 283 G; 234 T; 0 other;
     gtttaaaatc tgagtagctt ttcatcctga gagagtcatt caatgcggat cgtcttactt        60
     gcacctggag atataattga gaaatccgaa cccgaactta aacagagagg gattgatata       120
     aaaataaaag attggagaaa agatggcgga tcacacgtac ccagcaccga gagagagaac       180
     ggaggaacag gaaaagatgg agaatcggct acgcctggtt ctagcggatc taacggacat       240
     gtcggaagag atggagaaaa atctaaggga aatggcaagg aagaaaatga ttcacgacca       300
     ggagatagtc gatgcgtacg aactgatgat gagcggatta ctaagactga gatcaaggat       360
     ggggatggag ataagagcgg ggacaaacag agcgcatcag ctaaagatag taaggatgca       420
     gaaggggatg aaaggagtgc tgattctacc gtcgtcaaag gcaaaaagat caaagagaat       480
     gagggaacag atccaaagat cactaaacaa ttggctgctg aacgaagcat cgatggagac       540
     ggccccagtg gatccgtcta cgtcctcact cgtgctgtcg ccgatgcaat aaaccagaga       600
     agtggaaaac aactagatgt cctcgctacc ttatctgatc tgaatgggaa agggaaatgt       660
     tatcaaataa gtggaggagt agggaaaata attggcctag ataatgatgc tgttaaagag       720
     cagatagatg ccttaaatga attgaaatct caatatgatg gtccaaacgt aaatgcttta       780
     ctgaaaagag tattaaggat tgaaagtagt agtaaattgg atcaaatgtt tccaaaaaat       840
     gtagatgaaa aacagacgat tggatcaggc gtagtattag cgacgaatga cccatctttc       900
     ttaccacaat cgaacgcatt atttacatgc cccacaggag acacaaattg gaaggaagta       960
     gcgaggcagg cgacaaataa gacatcaatt cgagcataca cgtattcaga aattggcagt      1020
     ggatctgaaa ttaaagaggc gtttctctca ttgattgact cactataact cagtggcctg      1080
     gagcaactcg gatctcaaga tac                                              1103
//