ID   HQ842626; SV 1; linear; genomic RNA; STD; VRL; 1171 BP.
XX
AC   HQ842626;
XX
DT   20-NOV-2011 (Rel. 110, Created)
DT   20-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Umatilla virus isolate USA1969/01 segment 8, complete sequence.
XX
KW   .
XX
OS   Umatilla virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1171
RX   PUBMED; 21897849.
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.;
RT   "Umatilla virus genome sequencing and phylogenetic analysis: identification
RT   of stretch lagoon orbivirus as a new member of the Umatilla virus species";
RL   PLoS One 6(8):E23605-E23605(2011).
XX
RN   [2]
RP   1-1171
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.C.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Arbovirus Molecular Research Group, Vector Borne Disease Programme,
RL   Institute for Animal Health, Pirbright Laboratory, Ash Road, Pirbright,
RL   Woking, Surrey GU24 0NF, United Kingdom
XX
DR   MD5; aff251ceb5c4c957b193c5160f802426.
XX
CC   GenBank Accession Numbers HQ842619-HQ842628 represent sequences
CC   from the 10 segments of Umatilla virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1171
FT                   /organism="Umatilla virus"
FT                   /segment="8"
FT                   /host="bird"
FT                   /isolate="USA1969/01"
FT                   /serotype="1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="pool of Culex pipiens mosquitoes"
FT                   /collected_by="John Lazuick, Arbovirus Disease Section, Ft.
FT                   Collins, USA"
FT                   /collection_date="Jul-1969"
FT                   /db_xref="taxon:40060"
FT   CDS             18..1073
FT                   /codon_start=1
FT                   /product="VP7"
FT                   /db_xref="GOA:G8DP09"
FT                   /db_xref="InterPro:IPR001803"
FT                   /db_xref="InterPro:IPR008935"
FT                   /db_xref="InterPro:IPR008980"
FT                   /db_xref="InterPro:IPR023176"
FT                   /db_xref="InterPro:IPR023178"
FT                   /db_xref="UniProtKB/TrEMBL:G8DP09"
FT                   /protein_id="AEE98375.1"
FT                   /translation="MESARARALSLLEQLATLGDPRNQRDLNAVSGLTLFLTKYNATCD
FT                   RLLTLTPSTQEEHRVCFLAALDIVGAILGINLSGILHNYVPNAQVIAHLAREDLPYSTQ
FT                   AYRNVLRILNETSGHSNSSRLYDPYDDRAQLVPPGMFFRQNAQAQHFAYTSSREMSVAV
FT                   MAGETIDISQTIRPSMIGATQYCFSWAPYHLFYSYAGQVTRQQPRLNVEINRRDAAVGI
FT                   QHMAAPNSVVTITNTGNAASLVQFTVHWYTKIQAGWDVYPGYKSDCAAVYTYQDAIWSH
FT                   IRSNICGMKGLPGNRLPINPPGNEDHVFTMAVLARLFEVYTCHRPVVAQAVNRVGGPGL
FT                   YNQAVQNMGAI"
XX
SQ   Sequence 1171 BP; 359 A; 245 C; 282 G; 285 T; 0 other;
     gttttaaaag ctacagcatg gagtcggcac gtgcacgggc actctcgtta cttgaacaac        60
     tagcaacact tggagatccg agaaaccaaa gagacttaaa tgcagtaagt ggactaacgc       120
     tatttttaac caaatataac gcaacatgtg atcgtctttt gacactgacg ccttcaacgc       180
     aggaagaaca tagggtatgc tttttagccg cactagatat agtaggagcg atactgggaa       240
     taaacttatc gggtatattg cacaattatg taccaaacgc acaggtaatc gctcatctag       300
     cgagagaaga tttgccatac tcaacgcagg catataggaa tgtattaagg atattgaatg       360
     aaacgagcgg acactcgaac tcttcgagac tgtatgaccc atatgatgat agagcgcaac       420
     tcgtaccacc aggcatgttt tttagacaga acgcgcaagc gcagcacttt gcatatacat       480
     catcgcgaga aatgagtgtt gcagtgatgg cgggcgaaac gatcgatatc agccaaacaa       540
     taaggcctag tatgattgga gccacacaat attgtttctc gtgggcgcca tatcacctat       600
     tttattcata tgcaggccaa gtgacgcgac agcaaccaag attgaatgtt gaaattaaca       660
     gacgagatgc ggcggtggga attcaacaca tggcggcgcc aaattcggtt gtgacgatta       720
     cgaatacagg gaacgcagcg tcattggttc agtttactgt ccattggtac acaaaaattc       780
     aagctggatg ggatgtatat cctggataca aatcagattg tgctgcggta tatacatatc       840
     aagatgctat ttggagtcac atacggtcaa atatctgcgg aatgaaaggt ttgccaggaa       900
     atagactgcc aattaaccca ccaggaaatg aggaccatgt atttacaatg gccgttttgg       960
     cacgactttt tgaagtttat acatgccaca gaccagtcgt cgcacaggca gtgaacagag      1020
     tgggaggtcc cggattgtac aatcaagccg ttcaaaatat gggtgcgatt taagaggtaa      1080
     ggaagcccca cactttccct ctcgcacccg tgttgctccg ccacgaagta ccaggtgtgg      1140
     gtattgagtg aatgcttagc tttaaggata c                                     1171
//