ID   HQ842625; SV 1; linear; genomic RNA; STD; VRL; 1357 BP.
XX
AC   HQ842625;
XX
DT   20-NOV-2011 (Rel. 110, Created)
DT   20-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Umatilla virus isolate USA1969/01 segment 7, complete sequence.
XX
KW   .
XX
OS   Umatilla virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1357
RX   PUBMED; 21897849.
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.;
RT   "Umatilla virus genome sequencing and phylogenetic analysis: identification
RT   of stretch lagoon orbivirus as a new member of the Umatilla virus species";
RL   PLoS One 6(8):E23605-E23605(2011).
XX
RN   [2]
RP   1-1357
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.C.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Arbovirus Molecular Research Group, Vector Borne Disease Programme,
RL   Institute for Animal Health, Pirbright Laboratory, Ash Road, Pirbright,
RL   Woking, Surrey GU24 0NF, United Kingdom
XX
DR   MD5; cead6e0054c797c5c153b308a1516eda.
XX
CC   GenBank Accession Numbers HQ842619-HQ842628 represent sequences
CC   from the 10 segments of Umatilla virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1357
FT                   /organism="Umatilla virus"
FT                   /segment="7"
FT                   /host="bird"
FT                   /isolate="USA1969/01"
FT                   /serotype="1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="pool of Culex pipiens mosquitoes"
FT                   /collected_by="John Lazuick, Arbovirus Disease Section, Ft.
FT                   Collins, USA"
FT                   /collection_date="Jul-1969"
FT                   /db_xref="taxon:40060"
FT   CDS             80..1303
FT                   /codon_start=1
FT                   /product="NS2"
FT                   /db_xref="GOA:G8DP08"
FT                   /db_xref="InterPro:IPR007602"
FT                   /db_xref="InterPro:IPR037194"
FT                   /db_xref="UniProtKB/TrEMBL:G8DP08"
FT                   /protein_id="AEE98374.1"
FT                   /translation="MEQISHQRTERKQMYTRTFAFYSKERNNYVGASCAAQGKNYLVVK
FT                   IGATTQMCFTDSPVSRGAIIDVRKQCSIRIQDRDQSTFFVISSCSIEWSLDRWPRMVFE
FT                   TVDLHTKFGHLIINDKEVETEFKCGVAHGVVAPYTEEADQAGEGDIELPGVKFIKIEGS
FT                   LREERERLKEKRDEREEVLAVALKTSGSTRAQGRIHGLRFERVIELEKSSDVVPQGRAF
FT                   KRGSSSGSSFECEGDQLIKQDTLQQGVKTIMSQSFSGIPGVQTHNSELIKPPRMDWADE
FT                   MEQGAGRIKMPTIRLGTTQNSLEEAVKVMTLDEPKFNDNYYKVVNYLSESPDCAELLND
FT                   AKIQEPSSSGTYDRMLTQISFKEIDLPLYIVESQTKNYTYKGVGKATSAVVIESQGIVH
FT                   IVPTMNRN"
XX
SQ   Sequence 1357 BP; 443 A; 229 C; 359 G; 326 T; 0 other;
     gtttaaaatc tgacgtactt tctgtcactg gaaggagcat accaacgagg agaaatcaag        60
     aaaagtgaag agtgaaaaga tggagcaaat tagtcatcaa agaactgagc gtaagcagat       120
     gtacactcga acgtttgcat tctattcaaa ggagagaaac aattatgttg gagcgtcttg       180
     tgctgcgcaa gggaagaatt accttgtcgt caaaattggc gcgactactc aaatgtgctt       240
     tactgactca ccggtatcaa gaggtgcgat aatcgatgtg cgcaaacaat gttcaattcg       300
     gattcaagat cgcgatcaaa gcaccttttt tgtcatttca agttgcagca ttgaatggtc       360
     gctagatcgt tggccaagaa tggtttttga aacagtcgat ttgcacacaa aattcggtca       420
     tctgattatt aatgacaaag aagtggaaac tgaattcaaa tgtggtgttg cacatggtgt       480
     agttgcgccg tatactgagg aggcagatca ggcgggtgag ggggacattg aattgccagg       540
     agttaagttc ataaaaattg aaggatcatt gcgtgaagag agagagcgac taaaggagaa       600
     gagagacgaa agagaggaag tacttgcggt cgctttgaaa acttccgggt caacccgggc       660
     gcaggggcga attcatgggc tacgttttga aagggtgatt gagttggaga agagctcgga       720
     tgtagtaccg cagggtcgag cttttaaacg aggatcgagc tcgggtagtt ctttcgaatg       780
     cgagggagat caactgatta agcaagacac gctacagcag ggagtaaaga cgattatgtc       840
     acaaagcttt tcaggaatcc ctggagtgca gacgcataat agtgagttga tcaaaccacc       900
     acgaatggat tgggctgatg aaatggaaca aggagcagga cggattaaaa tgccaacgat       960
     tagattaggt acgacgcaga atagtcttga agaagcagta aaagttatga cgctagatga      1020
     gccaaaattc aatgataact attataaagt agtcaattat ctatcagaaa gccctgattg      1080
     cgcagaactg ctgaatgacg caaaaattca agagccatca tcttctggaa cgtatgatag      1140
     aatgctaact caaatttcat ttaaggagat agatctacca ctgtatattg tagagagtca      1200
     aacaaagaat tatacatata aaggcgttgg taaggcgact tccgcggtag tgatagagag      1260
     tcaagggatc gtgcacattg tccccaccat gaaccgtaat taaaggacgg ctagtgttgt      1320
     agtgggaagc tcacgattcg cgtcaggtta aggatac                               1357
//