ID   HQ842624; SV 1; linear; genomic RNA; STD; VRL; 1681 BP.
XX
AC   HQ842624;
XX
DT   20-NOV-2011 (Rel. 110, Created)
DT   20-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Umatilla virus isolate USA1969/01 segment 6, complete sequence.
XX
KW   .
XX
OS   Umatilla virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1681
RX   PUBMED; 21897849.
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.;
RT   "Umatilla virus genome sequencing and phylogenetic analysis: identification
RT   of stretch lagoon orbivirus as a new member of the Umatilla virus species";
RL   PLoS One 6(8):E23605-E23605(2011).
XX
RN   [2]
RP   1-1681
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.C.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Arbovirus Molecular Research Group, Vector Borne Disease Programme,
RL   Institute for Animal Health, Pirbright Laboratory, Ash Road, Pirbright,
RL   Woking, Surrey GU24 0NF, United Kingdom
XX
DR   MD5; 2d282d579b51aa1ec513b5c252a652cf.
XX
CC   GenBank Accession Numbers HQ842619-HQ842628 represent sequences
CC   from the 10 segments of Umatilla virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1681
FT                   /organism="Umatilla virus"
FT                   /segment="6"
FT                   /host="bird"
FT                   /isolate="USA1969/01"
FT                   /serotype="1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="pool of Culex pipiens mosquitoes"
FT                   /collected_by="John Lazuick, Arbovirus Disease Section, Ft.
FT                   Collins, USA"
FT                   /collection_date="Jul-1969"
FT                   /db_xref="taxon:40060"
FT   CDS             29..1618
FT                   /codon_start=1
FT                   /product="VP5"
FT                   /db_xref="GOA:G8DP07"
FT                   /db_xref="InterPro:IPR000145"
FT                   /db_xref="UniProtKB/TrEMBL:G8DP07"
FT                   /protein_id="AEE98373.1"
FT                   /translation="MGKISNAISKFGTGIKRAAKSDITKTILQAAASGVTRFAESEVGQ
FT                   RTIEGLVQGTAQTVLTGGSLGENVKKAVVTNVLGTHDIVTDPLDPVKHQMAAQLDEIKD
FT                   KVESDKLRAEMATVVKSKLAPINTELTKIENHLKQVHNNGKIEQNEIEILESAIKALSH
FT                   VVEIDQKGLKRLRHVLQKEERNRSSEEKAILNAMATNYESLRSMIARERDGLIEEAVEQ
FT                   TLDISGEIAEHLAAEVPLVGETLATGIATGRGVVQMYRLGQLIAEMGNLPMDHVVLPAI
FT                   TQGSLEVMLTADDSLEEQHLMQILESKIEHVDSIKREVDHLSENVVPIITTAAHQESLR
FT                   LGGKGTTIPQTVKAALHIPKKSRPAIHFYTAPWDSDYVVMFHVIGPYHSGESFLLCVDL
FT                   ATDYISRYDIYVPGHHASNPRIQKDVMTLQMAMDEFLKEASQVGGSTYIHQERLARGVG
FT                   QKAIYIGSQPYTSFYSSMYRNAEKLVREREVQMHVFRGPIALQRRTLLNVLMHGIVIIN
FT                   DNIREGRAFNRD"
XX
SQ   Sequence 1681 BP; 558 A; 294 C; 428 G; 401 T; 0 other;
     gtttaaaatc ttgcaacgga ccgcagccat ggggaagata agcaacgcca tctcgaagtt        60
     tggaaccggt ataaaacggg cagctaaaag tgatattaca aaaacaattt tacaggcagc       120
     tgcgagtgga gtcacacgtt ttgcagaaag cgaggttgga cagcgaacga ttgaaggatt       180
     agttcaggga acagcacaga cggtcttaac aggaggaagt ttaggggaaa acgtcaagaa       240
     agcggtcgtt acaaatgtac taggaacaca tgatatagta accgatcctt tggatccagt       300
     caagcatcag atggcagccc agctagacga aattaaagat aaggttgagt cggataaact       360
     gagggctgaa atggcgacgg tagttaagtc gaagttagca cctataaata cagagcttac       420
     taaaatagaa aaccatttaa aacaagtaca taataacggt aagattgaac aaaatgagat       480
     agaaatttta gaatcagcta ttaaggcgtt gtcacacgtt gtcgagatcg accagaaagg       540
     attgaaacgg ttaaggcatg ttttgcagaa agaagaacga aatagatcct cagaggaaaa       600
     agcaatactc aatgctatgg caacgaatta tgaatcgcta cgatcaatga ttgcgcgaga       660
     gcgtgatgga ttaattgaag aggcggtcga gcagacctta gacatttcag gagaaatagc       720
     ggaacatttg gcagctgagg ttccactggt aggtgagacg ctcgcaactg gtattgccac       780
     tgggagagga gtagtacaaa tgtataggct aggacagctt atcgctgaga tgggtaattt       840
     gcccatggat catgtcgttt tgccagccat tacgcaagga tcgttggaag tgatgctcac       900
     agcggatgat agcttggagg aacaacattt gatgcaaatc cttgaatcaa agatcgaaca       960
     tgtagattca attaaaagag aagtagatca tctatcagaa aacgtcgttc caataattac      1020
     aacagcggca catcaagaaa gtttaaggtt aggcgggaaa gggacgacaa taccacagac      1080
     ggtaaaagct gcgttgcata ttccgaaaaa gagtcgacca gcaattcatt tttatacagc      1140
     gccatgggac tctgactatg ttgttatgtt tcatgtgatt ggtccatatc atagcggaga      1200
     gtcctttctt ctgtgcgtgg atttggcaac tgattatata agtcgttatg atatttacgt      1260
     tccaggtcac cacgcatcca atccgcggat ccaaaaagat gtaatgacct tacagatggc      1320
     tatggatgaa tttttaaaag aggcgtcgca agttggaggg agcacgtata tacaccaaga      1380
     gaggttagcc agaggagttg ggcagaaagc aatttatatt gggagtcaac cctatacaag      1440
     tttttattca agtatgtacc gtaatgctga gaagctagtg agagagcgtg aggttcaaat      1500
     gcatgttttc cgggggccaa ttgctttaca acgaagaact ctgctgaacg ttttaatgca      1560
     tggcatagta ataatcaatg acaatataag ggagggccgg gctttcaatc gagactagtt      1620
     gcctctatct tcctaacgag ctggacgtga aagtcaagcg gagacgcaag attaaggata      1680
     c                                                                      1681
//