ID   HQ842623; SV 1; linear; genomic RNA; STD; VRL; 2021 BP.
XX
AC   HQ842623;
XX
DT   20-NOV-2011 (Rel. 110, Created)
DT   20-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Umatilla virus isolate USA1969/01 segment 5, complete sequence.
XX
KW   .
XX
OS   Umatilla virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-2021
RX   PUBMED; 21897849.
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.;
RT   "Umatilla virus genome sequencing and phylogenetic analysis: identification
RT   of stretch lagoon orbivirus as a new member of the Umatilla virus species";
RL   PLoS One 6(8):E23605-E23605(2011).
XX
RN   [2]
RP   1-2021
RA   Belaganahalli M.N., Maan S., Maan N.S., Tesh R., Attoui H., Mertens P.P.C.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Arbovirus Molecular Research Group, Vector Borne Disease Programme,
RL   Institute for Animal Health, Pirbright Laboratory, Ash Road, Pirbright,
RL   Woking, Surrey GU24 0NF, United Kingdom
XX
DR   MD5; 4aca51f59b20a979a3d2d964e65d310e.
XX
CC   GenBank Accession Numbers HQ842619-HQ842628 represent sequences
CC   from the 10 segments of Umatilla virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2021
FT                   /organism="Umatilla virus"
FT                   /segment="5"
FT                   /host="bird"
FT                   /isolate="USA1969/01"
FT                   /serotype="1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="pool of Culex pipiens mosquitoes"
FT                   /collected_by="John Lazuick, Arbovirus Disease Section, Ft.
FT                   Collins, USA"
FT                   /collection_date="Jul-1969"
FT                   /db_xref="taxon:40060"
FT   CDS             15..1961
FT                   /codon_start=1
FT                   /product="VP4"
FT                   /note="Cap; viral guanylyltransferase and
FT                   methyltransferase; viral capping enzyme"
FT                   /db_xref="GOA:G8DP06"
FT                   /db_xref="InterPro:IPR007753"
FT                   /db_xref="UniProtKB/TrEMBL:G8DP06"
FT                   /protein_id="AEE98372.1"
FT                   /translation="MSHAVIHLSKSLEHLASKLFLPTWKIEGDKTVNELWIENGRYFTD
FT                   VYAIGRLHALTIRQARGHSIIFVVYGDDSTRLKDAIAPRDIHIPKGSLDLRGPEVHKML
FT                   ERIIGAKRVRLRAEFGNVLRKYAFKNCITFHGSEIETVTKSDPRKHKVYGLPELCPMIT
FT                   RFGVMDNEIYQSDAACDEKLVSMLDYAIYSCDVVYYVGCGDLRTLRIFQKRDPQRFSRV
FT                   KWVCIDPIAPNYGSSNVKVYPCVFKEPKDLLKFKQTGKEHMLIWDVRSDKGDASPWEWE
FT                   DICREQDALGEETARKNKSWLHMAIVKRRIPQYQEQLTLYGSCVLPQPGAPQNMYELRN
FT                   VIIHHDAPSHIDRKHLQEAQLFYVNVKKAREMVAKFHGLDRGRKLKRSIIETLHIMRDN
FT                   GLTSQHQEKRCDLFYLTNKRNEDYQMQISQILRESEIATLWVGDTKPYGYDDFKMDRRS
FT                   LMLRYSAEDRLVIDGNGFMLLLMWQGEIDARAIRYDPFWAEQFCVIVKYTDFERNLPDI
FT                   SLCRFIGLRAESSLMRIRSDHLHERTDLVKRLGLDVSGHLYVTLVSGRYCVDLLWWFRM
FT                   IMEWSSMNAKDKLQRMREKNVEVIEWKDDKVDEPWHVREDLIAALRHAKEMANLSSMDV
FT                   HRWIVYLHGFALK"
XX
SQ   Sequence 2021 BP; 667 A; 302 C; 507 G; 545 T; 0 other;
     gttttagatg aacgatgtca catgcagtaa tacacttatc taagagtttg gaacatctag        60
     cgagcaaatt gtttttaccg acatggaaaa tcgaaggaga taaaacagtc aatgaattat       120
     ggatcgaaaa tggacgttac tttactgatg tttatgctat tggaagacta cacgcgttaa       180
     ccatacgaca ggcaagagga catagtatta tctttgtagt atatggagat gattctactc       240
     gattaaagga tgcgattgca ccgcgggaca tacatatacc gaaaggaagt ttagatttac       300
     gaggtcctga ggtacataaa atgctagaac ggataatagg tgcgaagcga gtgcgactta       360
     gggcggaatt tggaaatgtg ttaagaaagt acgcttttaa gaactgcata acatttcatg       420
     gaagtgaaat tgagacggtg acaaaatcag atccgcgaaa gcataaagtg tatggtttac       480
     ccgaattatg tccaatgata actagatttg gtgtaatgga taatgaaatc taccaaagtg       540
     atgccgcctg tgatgaaaaa ttggtatcga tgttagatta tgcaatatat tcatgcgatg       600
     tggtttatta cgtcgggtgt ggagatctac gaacgctacg gattttccaa aaacgcgatc       660
     ctcaaaggtt ctcaagagtt aagtgggtat gtatcgatcc tatcgcacct aactatggaa       720
     gttcaaacgt aaaagtatac ccatgtgttt tcaaagagcc aaaagatctg ctaaagttca       780
     aacaaacggg taaagaacat atgttaattt gggatgtgag aagtgacaag ggtgatgcgt       840
     ctccgtggga atgggaggat atctgccgag agcaagatgc actgggagaa gaaacagcta       900
     ggaaaaataa aagttggcta catatggcga ttgtgaaaag acgaattccg caatatcaag       960
     agcagcttac attgtacggt agctgtgtgc tgccgcaacc gggtgcacca cagaatatgt      1020
     atgagttgag aaatgtaata atacatcatg atgcgccgag tcatatagat aggaaacatt      1080
     tacaagaagc tcaacttttt tacgtgaatg tgaagaaagc acgagaaatg gtggctaagt      1140
     ttcacggcct tgatagaggg agaaaattga agagatcgat aattgaaacg ttacatataa      1200
     tgagagacaa tggtctgaca agtcagcatc aggagaaacg atgtgattta ttctatctta      1260
     cgaataagcg gaacgaagat tatcaaatgc agattagcca gatattacgt gaatccgaga      1320
     tagcaacatt atgggtggga gatactaagc catatggtta tgatgatttc aaaatggatc      1380
     gtcgaagcct gatgctacgc tattcagctg aagatagatt ggttatcgac ggaaatggat      1440
     tcatgttact attaatgtgg caaggtgaga tagatgcgcg agcgattaga tatgatccgt      1500
     tttgggcgga acaattttgc gtgattgtta agtatactga ctttgaacga aatttaccag      1560
     atatatcatt gtgtagattt ataggactaa gagccgaatc atctttaatg agaatacgat      1620
     cagaccatct acatgaacga acagatctgg taaaaagatt gggtttagat gtttcaggcc      1680
     atttatatgt aacattagta tcaggtcgtt attgtgtgga tctgttgtgg tggttccgaa      1740
     tgattatgga gtggtcttca atgaatgcaa aggataaact ccaaaggatg cgagagaaga      1800
     atgttgaagt aatagaatgg aaagatgata aggtagatga gccatggcat gttagagaag      1860
     atttgattgc cgcattacga catgcgaagg agatggctaa cctaagctca atggatgtcc      1920
     accgatggat agtgtatctg catgggttcg ctttgaaata aagcggactt gcctcgggtc      1980
     gtcgtgctca ctttggggag tgtcatcgtt cacaaggata c                          2021
//