ID HQ839730; SV 1; linear; genomic RNA; STD; VRL; 2927 BP. XX AC HQ839730; XX DT 18-JUL-2011 (Rel. 109, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Tomato spotted wilt virus isolate p105-RB-MaxI segment S, complete DE sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2927 RX PUBMED; 24623427. RA Margaria P., Bosco L., Vallino M., Ciuffo M., Mautino G.C., Tavella L., RA Turina M.; RT "The NSs protein of tomato spotted wilt virus is required for persistent RT infection and transmission by Frankliniella occidentalis"; RL J. Virol. 88(10):5788-5802(2014). XX RN [2] RP 1-2927 RA Margaria P., Ciuffo M., Mautino G., Bosco L., Tavella L., Turina M.; RT "Genetic evidence for a role of the NSs protein of TSWV for its efficient RT transmission by the thrips vector Frankliniella occidentalis"; RL Unpublished. XX RN [3] RP 1-2927 RA Margaria P., Ciuffo M., Mautino G., Bosco L., Tavella L., Turina M.; RT ; RL Submitted (29-DEC-2010) to the INSDC. RL Istituto di Virologia Vegetale, CNR Torino, Italy, Strada delle Cacce 73, RL Torino, TO 10135, Italy XX DR MD5; 632fd75461fc4cab7f2efc4a3140df76. XX FH Key Location/Qualifiers FH FT source 1..2927 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="pepper" FT /isolate="p105-RB-MaxI" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="Oct-2010" FT /db_xref="taxon:3052585" FT CDS 89..1060 FT /codon_start=1 FT /product="truncated silencing suppressor" FT /note="truncated NSs" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:G0YW90" FT /protein_id="AEK21293.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSQLVQTQ FT LYSDSRSKSSFGYTAKVGDLPCEEEEILSQHVYIPIFDDIDFSINIDDSVLALSVCSNT FT VNANGVKHQGHLKVLSPAQLHSIGSIMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNSQAFVKASTDSHFRLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI FT ACIPNYNSVETALNITVICKHQLPIRKFKAPFELSMMFSDLK" FT variation 1058 FT /replace="g" FT CDS complement(2000..2776) FT /codon_start=1 FT /product="nucleocapsid" FT /note="Nc" FT /db_xref="GOA:Q88910" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q88910" FT /protein_id="AEK21294.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2927 BP; 926 A; 548 C; 468 G; 985 T; 0 other; agagcaattg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctcaact agttcagacc caactgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa agtaggggat cttccttgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta gcatcaatat 360 tgatgactct gttctggcat tatctgtttg ctcaaataca gtcaatgcta atggagtgaa 420 acatcaaggt catttgaagg ttttgtctcc tgctcagctc cactctattg gatctatcat 480 gaacagatct gatattacgg atcgattcca gctccaagaa aaagatataa ttcccaatga 540 cagatacatt gaagctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagatg tgctataatc aagctttagg caaagtgaat gttctatctc ctaatagaaa 660 tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtgaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taactctcaa gcttttgtca aagcttccac tgattctcat ttcaggctga gcctctggct 840 aagggttcca aaggttttga agcagatttc cattcagaaa ttgttcaagg ttgcaggaga 900 tgaaacaaat aaaacatttt atttatctat tgcctgcatt ccaaactata acagtgttga 960 gacagcttta aacattactg ttatttgcaa acatcagctc ccaattcgta aatttaaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaagtag ccttacaaca ttgttcatga 1080 tccttcatat ccccaaagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttgc aagaagatgt gatcatctac accttgaaca accatgagct 1200 aactcctgga aagttagatt taggtgaaaa aaccttgaat tacagtgaag atgcctacaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttatttagac agcatccaaa tcccttcctg gaagatagac tttgccaggg gagaaattaa 1380 aatttctccg caatctattt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaaga ttaaggaagc acatgcttca ggatcaaaat gatcttgctg 1500 tgtccagctt tttctaatta tgttatgttt attttcctcc tttacttata attatttctc 1560 tgtttgtcat ttctttcaaa ttcctcctgc ctagtagaaa ccataaaaac aaaaataaaa 1620 ataaaataaa atcaaaataa aataaaaatc aaaaaatgaa ataaaacaac aaaaaattaa 1680 aaaacaaaaa accaaaaaag atcccgaaag ggacaatttt ggccaaattt gggttttgtt 1740 tttgtttttt gttttttgtt ttttgttttt tatttttatt ttttattttt tattttactt 1800 tattttattt ttatttgttt ttattttatg tttttttgtt ggttttttat tatgttattt 1860 attaagcaca acacacagaa agcaaacttt aattaaacac acttatttaa aatttaacac 1920 actaagcaag cacaagcaat aaagataaag aaagctttat atatttatag gttttttata 1980 atttaactta cagctgcttt taagcaagtt ctgcgagttt tgcctgtttt ttaaccccaa 2040 acatttcata gaacttgtta agagtttcac tgtaatgttc catagcaata cttcctttag 2100 cattaggatt gctggagcta agtatagcag catactcttt ccccttcttc acctgatctt 2160 cattcatttc aaatgctttg cttttcagca cagtgcaaac tttccctaag gcttccctgg 2220 tgtcatactt ctttgggtcg atcccaaggt ccttgtattt tgcatcctga tatatagcca 2280 agacaacact gatcatctca aagctatcga ctgaagcaat aagaggtaag ctacctccca 2340 gcattatggc aagcctcaca gactttgcat catcaagagg taatccatag gcttgaatca 2400 aagggtggga agcaatctta gatttgatag tattgagatt ctcggaattc ccagtttcct 2460 caacaagcct gaccctgatc aagctatcaa gccttctgaa ggtcatgtca gtggctccaa 2520 tcctgtctga agttttcttt atggtaattt taccaaaagt aaaatcactt tgcttaataa 2580 ccttcattat gctctgacga ttcttcagga atgtcagaca tgaaataaca ctcatctttt 2640 tgatctggtc aaggttttcc agacaaaaag tcttgaagtt gaatgctacc agattctgat 2700 cttcctcaaa ctcaaggtct ttgccttgtg tcaacaaagc aacaatgctt tccttagtga 2760 gcttaacctt agacatgatg atcgtagaag ttgttatatg ctttgaccgt atgtaactca 2820 aggtgcaaaa gtacaactct gtatcccgca gtcgtttctt agggttttaa tgtgatgatt 2880 tgtaagactg agtgttaagg tttgaataaa attgacacaa ttgctct 2927 //