ID HQ834697; SV 1; linear; viral cRNA; STD; VRL; 6588 BP. XX AC HQ834697; XX DT 22-MAR-2012 (Rel. 112, Created) DT 22-MAR-2012 (Rel. 112, Last updated, Version 1) XX DE Jeju virus strain 10-11 RNA-dependent RNA polymerase gene, complete cds. XX KW . XX OS Jeju virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus. XX RN [1] RP 1-6588 RX DOI; 10.1016/j.virol.2011.11.013. RX PUBMED; 22230701. RA Arai S., Gu S.H., Baek L.J., Tabara K., Bennett S.N., Oh H.S., Takada N., RA Kang H.J., Tanaka-Taya K., Morikawa S., Okabe N., Yanagihara R., Song J.W.; RT "Divergent ancestral lineages of newfound hantaviruses harbored by RT phylogenetically related crocidurine shrew species in Korea"; RL Virology 424(2):99-105(2012). XX RN [2] RP 1-6588 RA Gu S.H., Baek L.J., Yanagihara R., Song J.-W.; RT ; RL Submitted (28-DEC-2010) to the INSDC. RL Department of Microbiology, College of Medicine, Korea University, 5-ga, RL Anam-dong, Sungbuk-gu, Seoul 136-705, Korea XX DR MD5; aefb8d0160b388c39ec6380450f0b3d5. DR EuropePMC; PMC3288197; 22230701. DR EuropePMC; PMC4054438; 24741077. DR EuropePMC; PMC4082828; 24044372. XX FH Key Location/Qualifiers FH FT source 1..6588 FT /organism="Jeju virus" FT /segment="L" FT /host="Crocidura shantungensis" FT /strain="10-11" FT /mol_type="viral cRNA" FT /country="South Korea" FT /isolation_source="lung tissue" FT /collection_date="29-Apr-2010" FT /db_xref="taxon:990280" FT CDS 36..6509 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:H8XZP5" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR024378" FT /db_xref="UniProtKB/TrEMBL:H8XZP5" FT /protein_id="AEX56233.1" FT /translation="MEKYREIHEKLKERAVGTMTAVECIDYLDRLYAVRHDLVDQMIKH FT DWSDNKDSEEPISKVLVVAGVPGNVINWVEKKIIPDDPSGKTLKSFFKMTPDNYKIQGF FT SIEFVEVTVSADVDRAIKEKYNKYEAGLKYTELQLQYAYQKGEIPQPYQIKFSVVAVKT FT DGSNISTQWPSRRNDGVVQYMRMVQAEIGYVREHLIKPEERSQLEAMFNLKFHIGLDTN FT QVFYIPSYPGIASVKPRLGELVEYCKNWMKVRHDFAFHEVTGKAVMKEFEKGELRHATN FT YKLSNHPRNFLLIQCALNRSYQPATITSDQLDTRTACHEILKFQPETPTVAIVLDMAYK FT YLNFDRDDLVAYYSNQSSFEQTDIVKQPGTFKLTSSQLRGMSKIMLERLGKHEKEVNHG FT SLLESLEIKSQLVQDECVTNITKILSNLELNIEEPITFSRNTAKHTYVDTLLEKFLSNE FT LQRYLIDIIKKTTAWHLGQLIRDITESLIAHSGLKRSKYWSIHAYNHGNVLLCILPSKS FT LESAGSYIRFITVFRLGPGLVDPGNLDSILEGDEGTWAVSKIMSLDLNRLLALNIAFEK FT ALIATATWFHYYTEDQSHFPLQHAVRSVFSYHLLLSVCQKMKVCALFDNLRYLIPSVTA FT LYSGFPSLIENFFKRPFKTALEVYVYSIAKSLLVSLAQNNKSRFFSRVKLLGLTIDQST FT VGASGVYPSLISKVIYKHYQSLISEVTTCFFLFEKGLHGNVNEEAKIHLETVEWAQKFR FT HLEETYGAHMVDHGYTIRDLYEIPNLVQQQMYCQDVTELAASELNQVLQSKSAIVANSI FT INKHWDKPYFSQTRNISLKGMSGCLQEDGHLSSSVTLIEAIRYLQHSRVNPTLIQLYEE FT TRDQKAQARIVRKYQRTENDRGFFITTLATRCRLEIIEDYYDAIAKNVAEEYISYGGEK FT KIINIQGALEKALRWAAGESSIQLSTGEVLKLKRKLMYVSADATKWSPGDNSAKFQRFT FT SILHNGLHDNKLRNCVIDALRHIYKTDFFVSRKLKNYINNMETLDDNVREFLNFFPNGQ FT CGEVKGNWLQGNLNKCSSLFAVALSLLFKKVWKELFPELDCFFEFAHHSDDGLFIYGYL FT EPMGDGTDWYLYVTQQIQAGNHHWYGVNTEMWKCMFNLHEHILLMGSIKVSPKKTTVSP FT TNAEFLSTFFEGCAVSIPYIKILIGSLSELPGLGYFDDIAAAQARCVKALDMGATPQIA FT QLAIGLCTSKVERLYGTALGMINHPGSYLAVKHQDTPIPLGGSGTMSIMELATSGIGMS FT DKNLLKRALQGFQHKRRKADKYVLGLFKFLMKLSEETFNHERLGEFSFIGKVQWKIFTP FT KSEFEFFDMFSRAFMDEWTKQHPTYDYIIPRSRDNLIVYLVRKLNDPSIITAMTMQSPL FT QLRFRMQAKQHMKVCKMNEEWVTFREVLSAADSFATSYEPSASDIDLFQTLVSCTFSKE FT YAWKDFLNNVEIEVIPTKQVRKPKVARVFTVREKDQMIQNNLPSVIGYKFAISAEEIND FT VIKSSRFPDSLASDLVTMKDGVYRELGLDIGKPEVMKRVAPLLYKSSKSRVVIVQGNVE FT GTAESICNYWLRTMSLVKTIKVTPHKEVLKAVSIFNRKEDIGQHKDLAALRLCIEVWRW FT SKANNAPINDWFNALWFEDKTFSEWIDRFIRVGVPLVDPEIQCAALMIADIRGNMALLQ FT TQANRRAYSGKQYDAYCTQTYNEETKLYEGDLRVTFNFGVDCARLEIFWEKQAYILETS FT ITQKHVLKVMMEEVTKELLRCGMRFNTEQVNGTKALVLFKTESGFEWGKPNIPCIVYKH FT CQLRTSLRTQQTVNHKFQISIRDNGLKAIAQHDEDSPRFLLAHAFHTIRDVRYQGIDAV FT GNIWFEHKNIKLYLNPIINSGLFENFMKSLPAVIPPAAYSLIMKRAKVSVDLFMFNDLL FT KLINPKNTLNLDGIVMTPEGLSTLSSLSSKQMSEAVTGSDSDDYEDEDTDSDEDYTISL FT DDINFDQIDFHSDIEHFLQDETTYTTDLLITSEETVVKKMRGIIRILEPVHLIRSWVSR FT GLLIEKVYNKVNIILIARYLSKTFEFNRIPVINLDPYDLTELEGIVKGWGEQVIDDFEN FT LDQEARNLVETKGIIPEDVLPDSLFSFRHTLVLLRRLFPPDTISSFY" XX SQ Sequence 6588 BP; 2245 A; 1021 C; 1321 G; 2001 T; 0 other; tagtagtaga ctccaggaaa gaaaaatcag aaaacatgga aaagtataga gaaatacatg 60 aaaagctaaa agagagggca gtgggtacta tgactgcagt agaatgtatt gattatttag 120 atagacttta tgcagtaagg catgatcttg ttgatcaaat gataaagcat gattggtcag 180 ataataagga tagtgaagaa ccaatttcaa aagttcttgt tgttgcaggg gtccctggta 240 atgttataaa ttgggtggaa aaaaagatca tccctgatga cccatcggga aagaccttga 300 aatcattctt taagatgact ccggacaatt acaaaattca aggtttctct attgaatttg 360 tggaagttac agttagtgca gatgttgaca gggctataaa ggagaagtat aataaatatg 420 aagctgggtt aaagtataca gaacttcagc ttcaatatgc ctaccaaaag ggtgaaatac 480 cacaaccata tcaaattaag tttagtgttg ttgctgtgaa aacagatggg tctaatatat 540 ccacacagtg gcctagtaga cgaaatgatg gtgtagttca atatatgagg atggtgcaag 600 ctgagattgg atatgtccga gaacatttaa tcaagccaga agagcgtagt cagttagagg 660 caatgttcaa tttaaaattt catatcggcc tagatacaaa tcaggttttt tacatcccaa 720 gctacccagg aatagcatca gttaagccaa gattaggaga gttggtagag tattgtaaga 780 actggatgaa agttagacat gattttgcat ttcacgaggt cactggtaaa gcagttatga 840 aagaatttga aaaaggagaa ttgagacacg caacaaacta taagttatca aaccatcctc 900 ggaattttct tctaattcaa tgtgctttaa acagatcata ccaaccagca acaataacaa 960 gtgatcagct tgatactaga acagcttgtc atgagatttt aaaattccag ccagagacac 1020 cgactgttgc tattgtttta gatatggcat ataaatattt aaattttgat agggatgatc 1080 tggttgctta ttactccaat cagagttctt ttgaacaaac agatattgtt aagcaaccag 1140 gaacatttaa attaacatca tcacaactga gaggcatgtc aaaaataatg ctggaacgtt 1200 taggaaagca tgagaaagag gtgaatcatg gatctctatt agagagtctt gagataaaga 1260 gtcaactagt tcaggatgaa tgtgtaacta atatcacaaa gattttatcc aacttagaat 1320 taaatattga ggaacctata acatttagtc gtaatactgc aaaacatact tatgtagata 1380 cactattaga gaagtttcta agtaatgagc tgcaacgata tttaatagat attattaaaa 1440 aaaccacagc atggcatcta ggacaattaa tcagagacat tacagagagc ttgattgcac 1500 attcaggttt gaagcgctca aagtattggt ccatccatgc atataatcat gggaatgtct 1560 tattgtgtat cttaccgtct aagtcattag agtctgctgg ttcatatatt cggtttataa 1620 cagtatttag gcttggtcca ggtctggttg atcctggaaa tcttgatagt atcctggaag 1680 gggatgaagg cacttgggca gtatcaaaaa ttatgagctt agatcttaac agattattag 1740 cactcaatat agcctttgaa aaggctttga tagcaactgc aacatggttt cattattata 1800 cagaagatca atcccacttt cccctacaac atgctgttag atctgtattt tcttatcact 1860 tattactttc tgtctgccag aaaatgaaag tatgtgcttt atttgacaat cttcgttatc 1920 taattccatc agtaacagcc ttgtattcag gattcccatc tttaatagag aatttcttta 1980 agagaccctt caagactgca ttagaagtat atgtctatag cattgcaaaa tccctactgg 2040 tgtctctggc acaaaacaat aaatctcgat tcttttctag ggtgaaactt ctaggcctga 2100 ctatagatca atcaactgtt ggtgcaagcg gggtgtatcc gtcattgatt agtaaagtta 2160 tatacaagca ttaccaaagc ctgatctcag aagttacaac ctgcttcttt ttatttgaaa 2220 aaggattgca tggtaatgtt aatgaagaag caaaaattca cctggagact gtagaatggg 2280 ctcaaaagtt taggcattta gaggaaacat atggagcaca tatggtagac catggttaca 2340 ctattagaga cctatatgaa attccaaatc tagttcagca acaaatgtat tgtcaagatg 2400 taactgaatt agctgctagt gaactaaatc aggttcttca atcaaagagt gctattgttg 2460 ctaattcaat aattaataaa cattgggata agccatattt cagtcaaaca cgcaacatca 2520 gcctaaaagg gatgtctggt tgtctccaag aagatggaca cttatcatca tccgttactc 2580 tgatagaagc aataaggtac ttacagcact caagagttaa cccaacattg atccagctct 2640 atgaggaaac acgtgatcag aaagcacaag ctagaattgt taggaaatac caaagaacag 2700 agaatgatag aggtttcttt attacaactc tagcaacaag gtgtaggcta gaaattattg 2760 aagattatta tgatgctata gctaaaaatg ttgcagagga atatatatca tacggtggtg 2820 aaaagaagat tatcaatata caaggagcac tagagaaagc attgaggtgg gctgcaggag 2880 agagttctat tcaactatca acaggtgagg tgcttaagct aaaacggaaa ttgatgtatg 2940 ttagtgctga tgctacaaaa tggtctccag gtgacaattc tgctaaattt caaaggttca 3000 caagcatttt gcataatggc ttacatgata acaaattgcg caactgtgtt atagatgcac 3060 tacgtcatat ttacaaaact gatttttttg tgtcacggaa attaaaaaac tacataaata 3120 acatggagac tcttgatgac aatgttagag aattcttaaa tttctttcct aatggacaat 3180 gtggagaagt caaagggaat tggctgcagg gtaatctgaa caagtgttct tcattatttg 3240 cagttgcctt atctctcttg ttcaagaaag tatggaaaga attgtttcct gaacttgatt 3300 gcttctttga atttgcacat cattctgatg atggattatt tatttatggt tacttggagc 3360 caatgggtga tggaaccgat tggtatttat atgtgactca acagatccaa gccggtaatc 3420 atcattggta tggtgttaac actgaaatgt ggaaatgcat gtttaattta catgaacata 3480 tcttattaat gggttcaata aaggtgtcac ccaaaaagac aacggtctca cctacaaatg 3540 cagagttttt atcaactttt tttgaaggtt gtgcagtatc aataccatat atcaagattc 3600 tgataggttc actctctgaa cttccaggat taggttattt tgatgacatt gctgctgctc 3660 aagcacgatg tgttaaggct ctggatatgg gggctacacc acagatagct caattagcta 3720 ttggattgtg tacaagtaaa gtagagcggc tctatgggac agcacttggg atgattaatc 3780 atccaggatc ttatttggct gttaaacacc aggacacacc aattccctta ggtggtagtg 3840 ggacaatgtc tatcatggaa ttggcaacct ctggaatagg tatgtctgat aaaaatttgc 3900 tcaaaagagc actgcaaggg tttcagcata aacgaagaaa agcggacaaa tatgtattag 3960 gtctttttaa attcttaatg aaattaagtg aagaaacgtt caatcatgag cgattagggg 4020 aattttcttt tatcggtaaa gtacaatgga aaatatttac tcctaagagt gaatttgaat 4080 tttttgatat gttttctaga gcatttatgg atgaatggac aaagcaacac cctacatatg 4140 attacataat accacgatca agagacaatt taattgtcta tttagttaga aagttaaatg 4200 atcctagcat aattacagct atgactatgc agtctcctct gcaactacgg tttcgaatgc 4260 aagctaaaca gcatatgaag gtgtgtaaga tgaatgaaga atgggtgact tttagggagg 4320 tacttagtgc tgcagacagt tttgcaacaa gttatgagcc atcagcaagt gatatagatc 4380 tatttcagac tctagtttca tgtacctttt caaaagaata tgcatggaaa gactttttaa 4440 ataatgtgga gatagaagtc attccaacta agcaagttag gaaacctaaa gtagctaggg 4500 tgttcacagt ccgggaaaaa gatcaaatga ttcaaaataa tctcccatct gtcataggtt 4560 ataagtttgc aatttccgca gaagaaatta acgatgtaat taagtcaagt agattcccag 4620 attcgttagc atcagattta gtaactatga aagatggtgt atatcgagag cttggcttgg 4680 atataggtaa gcctgaagta atgaaacgtg tggcacctct tctatataaa agttcaaaat 4740 ctcgtgttgt tattgttcaa ggaaatgttg aaggtactgc tgagtctatc tgtaattatt 4800 ggctaagaac aatgtctttg gttaaaacta ttaaagttac tccccataaa gaagtactaa 4860 aggctgtttc tatatttaat aggaaagaag atataggaca gcataaagat cttgcagcat 4920 taaggctctg tatagaggtt tggaggtggt caaaagcaaa taatgctcca attaatgact 4980 ggtttaatgc attatggttt gaggataaaa ctttttcaga atggattgat aggtttatta 5040 gggtaggggt ccctttagtt gacccagaaa ttcaatgtgc agcattaatg attgctgata 5100 ttcgtggaaa tatggcatta ttacaaactc aggcgaatcg aagagcttat tcagggaaac 5160 aatatgatgc atattgtacc caaacatata atgaagaaac aaaattatac gaaggtgacc 5220 tgcgggtgac ctttaatttt ggagttgatt gtgcaaggct agaaatcttc tgggagaagc 5280 aagcttatat tcttgaaaca tctatcacac agaagcatgt tttaaaggtg atgatggaag 5340 aagtgacaaa agagctatta aggtgcggga tgagattcaa tacagagcaa gtaaatggaa 5400 ctaaagcttt agttctcttt aaaactgagt ctggctttga atggggaaaa cctaatatac 5460 catgcatagt atataaacat tgtcagctta gaacttcttt aaggacacaa caaactgtta 5520 atcataagtt tcagatctct attagagata atggcctgaa ggctatagca caacatgatg 5580 aggatagtcc tcgatttctc ttagcacatg cttttcacac aataagagat gttcggtacc 5640 aaggaattga tgcagtaggt aacatctggt ttgaacataa gaatattaag ctttatttaa 5700 atccgataat taattctgga ttatttgaaa atttcatgaa aagcttgcca gcagttatac 5760 cccctgctgc ttattcccta ataatgaaac gggcaaaggt ctcagtggat ctatttatgt 5820 ttaatgatct gttaaagcta ataaatccaa aaaatacact aaatttagat ggaattgtaa 5880 tgactcctga aggattaagt acactcagta gtttatcctc taagcaaatg tcagaagctg 5940 tcactggtag tgatagtgat gattatgaag atgaggatac agatagtgat gaagattata 6000 caataagttt ggatgatata aattttgatc aaatagattt tcactcagat attgaacact 6060 ttctacaaga tgaaacaact tacactactg atttattaat aacaagtgaa gaaactgttg 6120 tgaagaagat gagaggtatt attagaatct tagagcctgt tcatttaatc cgtagctggg 6180 tctctagagg attgctaatt gaaaaagtgt ataataaagt aaatattata cttatagctc 6240 gctatctttc caaaacattt gaattcaata ggatacctgt aataaatctt gacccatatg 6300 accttacaga gctagaaggg attgttaagg gctggggtga acaagtaatt gatgatttcg 6360 aaaatctaga tcaagaagct cggaatcttg ttgaaactaa aggaatcata cctgaagatg 6420 tgttgccaga ttctttgttt tcatttagac acactttagt cctactaaga cgattatttc 6480 caccagacac catctcatca ttctattgaa gatctacatc ctcttttaaa tcttatcttt 6540 tcacatgttc ttcttttctt ttgtttcatt tcctggagcc gactacta 6588 //