ID HQ830186; SV 1; linear; genomic RNA; STD; VRL; 2962 BP. XX AC HQ830186; XX DT 18-JUL-2011 (Rel. 109, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Tomato spotted wilt virus isolate p202/3RB segment S, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2962 RX PUBMED; 24623427. RA Margaria P., Bosco L., Vallino M., Ciuffo M., Mautino G.C., Tavella L., RA Turina M.; RT "The NSs protein of tomato spotted wilt virus is required for persistent RT infection and transmission by Frankliniella occidentalis"; RL J. Virol. 88(10):5788-5802(2014). XX RN [2] RP 1-2962 RA Margaria P., Ciuffo M., Mautino G., Bosco L., Tavella L., Turina M.; RT "Genetic evidence for a role of the NSs protein of TSWV for its efficient RT transmission by the thrips vector Frankliniella occidentalis"; RL Unpublished. XX RN [3] RP 1-2962 RA Margaria P., Ciuffo M., Mautino G., Bosco L., Tavella L., Turina M.; RT ; RL Submitted (24-DEC-2010) to the INSDC. RL Istituto di Virologia Vegetale, CNR Torino, Italy, Strada delle Cacce 73, RL Torino, TO 10135, Italy XX DR MD5; b953de9ff091fa0337049719c7e497f7. DR EuropePMC; PMC4019118; 24623427. XX FH Key Location/Qualifiers FH FT source 1..2962 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="pepper" FT /isolate="p202/3RB" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="1999" FT /db_xref="taxon:3052585" FT CDS 89..1420 FT /codon_start=1 FT /product="truncated silencing suppressor" FT /note="truncated NSs" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:G0YUQ4" FT /protein_id="AEK21287.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSPLVQTQ FT LYSDSRSKSSFGYTAKVGNLPCEEEEILSQHVYIPIFDDIDFSINIDDSVLALSVCSNT FT VNTNGVKHQGHLKVLSPAQLHSIGSTMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPSFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNSQAFVKASTDSHFKLSLWLRVPKVLKQVSIQKLFKVAGDETNKIFYLSI FT ACIPNHNSVETALNISVICKHQLPIRKCKAPFELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNYELTPGKLDLGERTLNYSEDICKRKYFLSKT FT LECLPSNTQTMSYLDSIQIPSWKIDFAREKLRFPHNLFQLQNLC" FT CDS complement(2035..2811) FT /codon_start=1 FT /product="nucleocapsid" FT /note="Nc" FT /db_xref="GOA:Q88910" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q88910" FT /protein_id="AEK21288.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2962 BP; 936 A; 547 C; 475 G; 1004 T; 0 other; agagcaattg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggcactg gttctccact agttcaaacc cagctgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa ggtagggaat cttccctgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta gcattaatat 360 tgatgactct gttctggcac tatctgtttg ctcaaataca gtcaatacta atggagtgaa 420 acatcaaggt catttgaaag ttttgtctcc tgctcagctc cactctattg gatctaccat 480 gaacagatct gatattacag accgattcca gcttcaagaa aaagacataa ttcccaatga 540 cagatacatc gaagctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagatg tgctataatc aagctttggg caaagtgaat gttttatccc ctaacaggaa 660 tgttcatgaa tggctgtaca gtttcaagcc aagtttcaat caagttgaaa gcaacaacag 720 aactgtaaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taactctcag gcttttgtca aagcttccac tgattctcat ttcaaactga gcctctggct 840 aagggtccca aaggttctga agcaggtctc tattcagaaa ttgttcaaag ttgcaggaga 900 cgaaacaaat aaaatatttt atttatctat tgcttgcatt ccaaaccata acagtgttga 960 gacagcttta aacatttctg ttatttgcaa gcatcagctc ccaattcgta aatgtaaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatat cctcagagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttac aagaagatgt gatcatctac actttgaaca actatgagct 1200 aactcctgga aagttagatt taggtgaaag aaccttaaat tacagtgaag atatctgcaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttacttggac agcatccaaa tcccttcctg gaagatagac tttgccaggg agaaattaag 1380 atttccccac aacctgtttc agttgcaaaa tctttgttaa agcttgattt aagcgggatc 1440 gaaaagaaag aatctaagat tccggaaaca tatgcttcag gatcaaaata atcttgctgt 1500 gtccggtttt tctaattatg ttatgtttat tttctttctt tacttataat tatttctctg 1560 ttttgtcatt tcttttaagt tcctcctgtt taatagaaac cataaaacaa aaaataaaat 1620 aaaaataaaa ttaaaaatga aacaaaaatc aaaaatgaaa caaaaataaa aaataaaaaa 1680 tgaaataaaa acaacaaaaa aattaaaaaa caaaaaccca aaaaagatcc cgaatgggac 1740 aatcttggcc aaatttgggt tttgttttgt ttttgttttt tgttttttgt ttttattttt 1800 attttattta tttattttat tttatttttg ttttttattt tttattttgt tttttatttt 1860 atgttttttc ttgtttttgt tattttgttt atttattaag cataacacac agaaagcaaa 1920 ctttaattaa acacacttat tttaaattta acacactaag caagcacaag caataaagat 1980 aaagaaagct ttatatattt gtagactttt ccataattta acttacagct gatttcaagc 2040 aagttctgcg agttttgcct gttttttaac cccgaacatt tcatagaact tgttaagagt 2100 ttcactgtaa tgttccatag caatacttcc tttagcatta ggattgctgg agctgagtat 2160 agcagcatac tcttttcctt tcttcacctg atcttcattc atttcaaatg ctttgctttt 2220 cagcacagtg caaacttttc ctaaggcttc tctggtgtca tacttctttg ggtcaatccc 2280 gaggtctttg tattttgcat cctgatatat agccaagaca acactgatca tctcaaagct 2340 atcaactgaa gcaataagag gtaagctacc tcccagcatt atggcaagcc tcacagactt 2400 tgcatcatca agaggtaatc cataggcttg aatcaaaggg tgggaagcaa tcttagattt 2460 gatagtattg agattctcag aattcccagt ttcctctaca agcctgaccc tgatcaagct 2520 atcaagcctt ctgaaggtca tgtcagtggc tccaatcctg tctgaagttt tctttatggt 2580 aattttacca aaagtaaaat cactttgttt aataaccttc attatactct gacgattctt 2640 caggaatgtc agacatgaaa taacgctcat cttcttgatc tggtcgaggt tttccagaca 2700 aaaagtcttg aagttgaatg ctaccagatt ctgatcttcc tcaaactcaa ggtctttgcc 2760 ttgtgtcaac aaagcaacaa tgctttcctt agtgagctta accttagaca tgatgattgt 2820 agaagttgtt atatgctttg accgtatgta attcaaggtg cgaaagtgca actctgtatt 2880 ccgcagtcgt ttcttagggt tttaatgtga tgatttgtaa gactgagtgt taaggtttga 2940 ataaaattga cacaattgct ct 2962 //