ID HQ830170; SV 1; linear; viral cRNA; STD; VRL; 3378 BP. XX AC HQ830170; XX DT 01-JUN-2011 (Rel. 109, Created) DT 01-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Phlebovirus JS6 segment M, complete sequence. XX KW . XX OS Phlebovirus JS6 OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Phenuiviridae; Phlebovirus. XX RN [1] RP 1-3378 RA Shan J., Zhao K.C., Cui L.B., Qi X., Shi Z.Y., Tang F.Y., Zhou M.H., RA Jiao Y.J., Guo X.L., Wang H.; RT "Genetic characteristics of novel Phlebovirus related to epidemic fever RT with thrombocytopenia syndrome in Jiangsu, China"; RL Unpublished. XX RN [2] RP 1-3378 RA Shan J., Zhao K.C., Cui L.B., Qi X., Shi Z.Y., Tang F.Y., Zhou M.H., RA Jiao Y.J., Guo X.L., Wang H.; RT ; RL Submitted (27-DEC-2010) to the INSDC. RL Institute of Pathogen Microbiology, Jiangsu Provincial Center for Disease, RL 172 Jiangsu Road, Nanjing, Jiangsu 210009, China XX DR MD5; 547f102b833976e74a3549784085f926. XX FH Key Location/Qualifiers FH FT source 1..3378 FT /organism="Phlebovirus JS6" FT /segment="M" FT /host="Homo sapiens" FT /strain="JS6" FT /mol_type="viral cRNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="11-Oct-2010" FT /db_xref="taxon:1010665" FT CDS 19..3240 FT /codon_start=1 FT /product="membrane glycoprotein polyprotein" FT /db_xref="GOA:F6L6N1" FT /db_xref="InterPro:IPR009878" FT /db_xref="InterPro:IPR010826" FT /db_xref="UniProtKB/TrEMBL:F6L6N1" FT /protein_id="AEC50114.1" FT /translation="MMKVIWFSSLICLVIQCGGDTGPIICAGPIHSNKSADIPHLLGYS FT EKICQIDRLIHVSSWLRNHSQFQGYVGQRGGRSQVSYYPAENSYSRWSGLLSPCDADWL FT GMLVVKKAKGSDMIVPGPSYKGKVFFERPTFDGYVGWGCGSGKSRTESGELCSSDSGTS FT SGLLPSDRVLWIGDVACQPMTPIPEETFLELKSFSQSEFPDICKIDGIVFNQCEGESLP FT QPFDVAWMDVGHSHKIIMREHKTKWVQESSSKDFVCYKEGTGPCSESEEKTCKTSGSCR FT GDMQFCKVAGCEHGEEASEAKCRCSLVHKPGEVVVSYGGMRVRPKCYGFSRMMATLEVN FT EPEQRIGQCTGCQLECINGGVRLITLTSELKSATVCASHFCSSATSGKKSTEIQFHSGS FT LVGKTAIHVKGALVDGTEFTFEGSCMFPDGCDAVDCTFCREFLKNPQCYPAKKWLFIII FT VILLGYAGLMLLTNVLKAIGVWGSWVIAPVKLVFAIIKKLMRAVSCLMGKLMDRGRQVI FT HEEIGENREGNQDDVRIEMARPRRVRHWMYSPVILTILAMGLAEGCDEMVHADSKLVSC FT RQGSGNMKECVTTGRALLPAVNPGQEACLHFTAPGSPDSKCLKIKVKRINLKCKKSSSY FT FVPDARSRCTSVRRCRWAGDCQSGCPPHFTSNSFSDDWAGKMDRAGLGFSGCSDGCGGA FT ACGCFNAAPSCIFWRKWVENPHGIIWKVSPCAAWVPSAVIELTMPSGEVRTFHPMSGIP FT TQVFKGVSVTYLGSDMEVSGLTDLCEIEELKSKKLALAPCNQAGMGVVGKVGEIQCSSE FT ESARTIKKDGCIWNADLVGIELRVDDAVCYSKITSVEAVANYSAIPTTIGGLRFERSHD FT SQGKISGSPLDITAIRGSFSINYRGLRLSLSEITATCTGEVTNVSGCYSCMTGAKVSIK FT LHSSKNSTAHVRCKGDETAFSVLEGVHSYSVSLSFDHAVVDEQCQLNCGGHESQVTLRG FT NLIFLDVPKFVDGSYMQTYHSTVPTGANIPSPTDWLNALFGNGLSRWILGVIGVLLGGL FT ALFFLIMSLFKLGTKQVFRSRTKLA" XX SQ Sequence 3378 BP; 860 A; 693 C; 970 G; 855 T; 0 other; acacagagac ggccaacaat gatgaaagtc atctggttct cctctctgat ctgcttagtc 60 attcaatgcg gtggggatac aggcccaatc atctgcgcag gacccatcca ctcaaacaag 120 agtgctgaca taccccacct gcttggctac tctgagaaga tttgtcagat agatcggctg 180 atacatgttt cgtcatggct tagaaaccac tcacaatttc agggctacgt agggcagcga 240 ggtggacgat ctcaggtgag ctactaccca gctgaaaatt cttactcaag gtggagtgga 300 cttctaagcc cctgtgatgc tgattggctt gggatgcttg ttgtgaagaa ggccaagggg 360 tctgatatga tagttccagg gccttcatac aaggggaaag tcttttttga acggccaact 420 tttgatggat acgtaggctg gggctgtggt agtgggaagt ctaggactga gtcaggtgag 480 ctctgcagtt cagactccgg gactagttct ggtcttctgc cctcagatag ggttctctgg 540 ataggtgatg ttgcttgtca gcctatgaca cccatccctg aggagacatt tctggagctg 600 aagagcttta gccaaagtga attcccagac atatgcaaaa ttgatggcat tgtgttcaac 660 cagtgtgagg gtgagagtct acctcagccc tttgatgttg catggatgga tgttggccac 720 tctcataaaa tcatcatgag ggagcacaag accaaatggg tacaagagag ctcatccaag 780 gattttgtgt gctacaagga agggactggg ccttgttctg aatcagaaga aaagacttgc 840 aagaccagtg gatcatgcag gggggacatg cagttttgca aggtggcagg ttgtgaacat 900 ggggaagagg catctgaagc caagtgcaga tgctcacttg tgcacaagcc cggggaagtc 960 gttgtgtcat atggagggat gcgtgtcaga ccaaagtgct atggtttctc cagaatgatg 1020 gcaacactgg aggtgaacga accagagcag aggattggtc aatgcactgg ctgccaacta 1080 gaatgcataa atgggggtgt gaggctaatc actctaacca gtgagctcaa gtcagctact 1140 gtctgcgctt ctcacttctg tagttctgcc acaagtggta agaaaagcac ggagattcaa 1200 ttccactcag gatcattggt tgggaaaaca gcaatccacg tcaaaggggc attggtagat 1260 ggaactgaat tcacatttga gggtagttgc atgttcccag atggttgtga tgcagtggac 1320 tgcacattct gtcgtgagtt tctaaaaaat ccccagtgct accctgcaaa gaagtggctg 1380 ttcatcatta ttgtcatcct ccttggatat gcaggcctca tgctactcac caatgttctt 1440 aaggcaattg gggtttgggg gtcatgggtc atagctccag tgaagctagt gtttgccatc 1500 ataaagaaac taatgagagc tgtgagctgc ctgatgggga aattgatgga tagaggaagg 1560 caagtgatcc atgaggaaat aggggagaat agagagggca accaagatga tgttaggatt 1620 gagatggcca gacccaggag ggtaaggcat tggatgtact cgcctgtcat cctgactatt 1680 ctagcaatgg ggcttgctga gggctgtgat gagatggtcc atgctgattc taaacttgtt 1740 tcgtgcaggc aagggagcgg aaatatgaag gaatgtgtca caactgggag ggcgcttctt 1800 cctgcagtga acccagggca agaggcgtgt ctgcacttca cggcacctgg aagtccggac 1860 tcaaaatgtc tcaaaattaa ggttaagagg atcaacctaa aatgtaaaaa gtcatcatca 1920 tattttgttc ctgatgcccg gtccaggtgt acatcagtga ggagatgtcg ttgggcaggg 1980 gactgccagt ctgggtgccc ccctcatttc acatccaact ccttttctga tgattgggca 2040 ggtaagatgg acagggctgg tctaggattc agtggctgct ctgatggatg tggaggagca 2100 gcctgtggtt gctttaatgc ggccccttct tgcattttct ggaggaaatg ggtagagaat 2160 ccacatggga tcatctggaa agtatctcca tgtgctgcat gggtcccatc agcggttata 2220 gagctaacaa tgccctcagg ggaggtgagg acattccacc ccatgagcgg aatccccaca 2280 caagtcttca agggtgtgag tgtaacttac ttgggctcag atatggaggt gtcaggcttg 2340 actgacctgt gtgagataga agagctcaag tcaaagaagc ttgcattagc tccctgcaac 2400 caggctggta tgggggttgt aggcaaggtt ggagagatac agtgcagtag cgaggaaagt 2460 gcccgtacca taaaaaaaga tgggtgcata tggaatgctg acctcgtggg tatagagcta 2520 cgggtggatg acgctgtgtg ctactctaag atcactagtg tggaggcagt tgcaaactac 2580 tccgccatac ccaccactat tggggggctg aggtttgaga gaagccatga cagccagggc 2640 aaaatatctg gtagccccct ggacatcaca gctataagag gatctttttc tatcaattat 2700 agaggccttc gactgagcct ctcagaaatt actgctactt gcacagggga agtgacaaat 2760 gtgagtgggt gttattcttg catgacaggc gccaaagtct ccatcaagtt gcatagcagc 2820 aaaaatagca ctgcccatgt aagatgcaaa ggggatgaga ctgccttcag tgtcttggag 2880 ggagtccata gctactctgt cagtctcagt tttgatcatg cagtagttga tgagcagtgc 2940 caactgaact gtgggggaca tgagagtcaa gtgactctga gaggcaacct catcttcctg 3000 gatgtcccga aatttgtgga tggcagctac atgcagacat atcatagcac tgtgcccaca 3060 ggggcaaata tcccaagccc tacagattgg ctaaatgcct tgtttggcaa tgggctgagt 3120 aggtggatcc tgggggtgat aggggtccta ctggggggat tggctctctt tttcttgatc 3180 atgtctttgt tcaagctggg aacaaaacag gtatttcgat cgaggacgaa gctggcttaa 3240 atgggcatat ttctggtcta atgaccctct gggggcagtg ctctcagggg agttggctca 3300 cagtgtgcat gtttcgtggt cctggctcac attcttagag catagaggtt ctgttgaagt 3360 gttggccggt ctttgtgt 3378 //