ID HQ830169; SV 1; linear; viral cRNA; STD; VRL; 6368 BP. XX AC HQ830169; XX DT 01-JUN-2011 (Rel. 109, Created) DT 01-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Phlebovirus JS6 segment L, complete sequence. XX KW . XX OS Phlebovirus JS6 OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Phenuiviridae; Phlebovirus. XX RN [1] RP 1-6368 RA Shan J., Zhao K.C., Cui L.B., Qi X., Shi Z.Y., Tang F.Y., Zhou M.H., RA Jiao Y.J., Guo X.L., Wang H.; RT "Genetic characteristics of novel Phlebovirus related to epidemic fever RT with thrombocytopenia syndrome in Jiangsu, China"; RL Unpublished. XX RN [2] RP 1-6368 RA Shan J., Zhao K.C., Cui L.B., Qi X., Shi Z.Y., Tang F.Y., Zhou M.H., RA Jiao Y.J., Guo X.L., Wang H.; RT ; RL Submitted (27-DEC-2010) to the INSDC. RL Institute of Pathogen Microbiology, Jiangsu Provincial Center for Disease, RL 172 Jiangsu Road, Nanjing, Jiangsu 210009, China XX DR MD5; 660fd62e76044cbf6ef42f44d5ea999a. XX FH Key Location/Qualifiers FH FT source 1..6368 FT /organism="Phlebovirus JS6" FT /segment="L" FT /host="Homo sapiens" FT /strain="JS6" FT /mol_type="viral cRNA" FT /country="China" FT /isolation_source="serum" FT /collection_date="11-Oct-2010" FT /db_xref="taxon:1010665" FT CDS 17..6271 FT /codon_start=1 FT /product="RNA polymerase" FT /db_xref="GOA:F6L6N0" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR022531" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:F6L6N0" FT /protein_id="AEC50117.1" FT /translation="MDLEVLCGRINVENGLSLGEPGLYDQIYDRPGLPDLDVTVDATGV FT TVDIGAVPDSASQLGSSINAGLITIQLSEAYKINHDFTFSGLSKTTDRRLSEVFPITHD FT GSDGMTPDVIHTRLDGTIVVVEFSTTRSHNIGGLEAAYRTKIEKYRDPISRRVDIMENP FT RVFFGVIVVSSGGVLSNMPLTQDEAEELMYRFCIANEIYTKARSMDADIELQKSEEELE FT AISRALSFFSLFEPNIERVEGTFPNSEIEMLEQFLSTPADVDFITKTLKAKEVEAYADL FT CDSHYLKPEKTIQERLEINRCEAIDKTQDLLAGLHARSNKQTSLNRGTVKLPPWLPKPS FT SESIDIKTDSGFGSLMDHGAYGELWAKCLLDVSLGNVEGVVSDPAKELDIAISDDPEKD FT TPKEAKITYRRFKPALSSSARQEFSLQGVEGKKWKRMAANQKKEKESHEALSPFLDVED FT IGDFLTFNNLLADSRYGDESVQRAVSILLEKASAMQDTELTHALNDSFKRNLSSNVVQW FT SLWVSCLAQELASALKQHCRAGEFIIKKLKFWPIYVIIKPTKSSSHIFYSLGIRKADVT FT RRLTGRVFSDTIDAGEWELTEFKSLKTCKLTNLVNLPCTMLNSIAFWREKLGVAPWLVR FT KPCSELREQVGLTFLISLEDKSKTEEIITLTRYTQMEGFVSPPMLPKPQKMLGKLDGPL FT RTKLQVYLLRKHLDCMVRIASQPFSLIPREGRVEWGGTFHAISGRSTNLENMVNSWYIG FT YYKNKEESTELNALGEMYKKIVEMEEDKPSSPEFLGWGDTDSPKKHEFSRSFLRAACSS FT LEREIAQRHGRQWKQNLEERVLREIGTKNILDLASMKATSNFSKDWELYSEVQTKEYHR FT SKLLEKMATLIEKGVMWYIDAVGQAWKAVLDDGCMRICLFKKNQHGGLREIYVMDANAR FT LVQFGVETMARCVCELSPHETVANPRLKNSIIENHGLKSARSLGPGSININSSNDAKKW FT NQGHYTTKLALVLCWFMPAKFHRFIWAAISMFRRKKMMVDLRFLAHLSSKSESRSSDPF FT REAMTDAFHGNREVSWMDKGRTYIKTETGMMQGILHFTSSLLHSCVQSFYKSYFVSKLK FT EGYMGESISGVVDVIEGSDDSAIMISIRPKSDMDEVRSRFFVANLLHSVKFLNPLFGIY FT SSEKSTVNTVYCVEYNSEFHFHRHLVRPTLRWIAASHQISETEALASRQEDYSNLLTQC FT LEGGASFSLTYLIQCTQLLHHYMLLGLCLHPLFGTFMGMLISDPDPALGFFLMDNPAFA FT GGAGFRFNLWRACKTTDLGRKYAYYFNEIQGKTKGDEDYRALDATSGGTLSHSVMVYWG FT DRKKYQALLSRMGLPEDWVEQIDENPGVLYRRAANKKELLLKLAEKVHSPGVTSSLSKG FT HVVPRVVAAGVYLLSRHCFRFSSSIHGRGSTQKASLIKLLMMSSISAMKHGGSLNPNQE FT RMLFPQAQEYDRVCTLLEEVEHLTGKFVVRERNIVRSRIDLFQEPVDLRCKAEDLVSEV FT WFGLKRTKLGPRLLKEEWDKLRASFAWLSTDPSETLRDGPFLSHVQFRNFIAHVDAKSR FT SVRLLGAPVKKSGGVTTISQVVRMNFFPGFSLEAEKSLDNQERLESISILKHVLFMVLN FT GPYTEEYKLEMIIEAFSTLVIPQPSEVIRKSRTMTLCLLSNYLSSRGGSILDQIERAQS FT GTLGGFSKPQKTFIRPGGGVGYKGKGVWTGVMEDTHVQILIDGDGASNWLEEIRLSSDA FT RLYDVIESIRRLCDDLGINNRVASAYRGHCMVRLSGFKIKPASRTDGCPVRIMERGFRI FT RELQNPDEVKMRVRGDILNLSVTIQEGRVMNILSYRPRDTDISESAAAYLWSNRDLFSF FT GKKEPSCSWICLKTLDNWAWSHASVLLANDRKTQGIDNRAMGNIFRDCLEGSLRKQGLM FT RSKLTEMVEKNVVPLTTQELVDILEEDIDFSDVIAVELSEGSLDIESIFDGAPILWSAE FT VEEFGEGVVAVSYSSKYYHLTLMDQAAITMCAIMGKEGCRGLLTEKRCMAAIREQVRPF FT LIFLQIPEDSISWVSDQFCDSRGLDEESTIMWG" XX SQ Sequence 6368 BP; 1764 A; 1391 C; 1691 G; 1522 T; 0 other; acacagagac gcccagatgg acttggaagt gctttgtggt aggataaacg tggagaatgg 60 gctgtctctt ggagaaccag gcctgtacga ccaaatctac gacaggcctg ggctaccaga 120 cctagatgtg actgtcgatg ccacaggtgt aacagtggac ataggagctg tgccagactc 180 agcatcacaa ctgggttcat caatcaatgc tgggttgatc acaatccagc tctctgaagc 240 atataagatc aatcatgact tcacgttctc tggcctgtca aagacaacag atcgacgcct 300 ctcagaggtg ttccccatta cccatgatgg ttctgatggg atgactcctg atgtgattca 360 caccagattg gatgggacca ttgtggtggt tgaattttca accactagga gccataacat 420 tgggggcctg gaggcagcat ataggacaaa gatagaaaaa tatagggacc caatctcaag 480 gcgtgttgat atcatggaga acccgagggt cttctttggc gttattgtag tctcgtcagg 540 aggggttctg tccaacatgc ccctgactca ggatgaggca gaggagctca tgtacaggtt 600 ttgcattgcc aatgagatct ataccaaggc tagatctatg gatgcagaca ttgagctaca 660 gaagagtgag gaagagcttg aggctattag cagggcacta tcattcttca gtttgtttga 720 gcctaacatt gaaagagtag aaggaacatt ccctaattca gaaatcgaga tgctggaaca 780 gtttctctca actccagctg atgttgactt catcaccaag accctcaaag caaaagaggt 840 agaggcctat gctgatcttt gtgacagcca ctacctaaag cctgaaaaaa ccattcagga 900 gcggctagag atcaatagat gtgaggctat tgacaaaact caggacctcc tagctggtct 960 acatgcaagg agcaacaagc aaacatcatt gaatcgaggg acagtcaaac tcccgccctg 1020 gctaccaaag ccgtcaagtg agtcaataga catcaagacc gactcaggct ttggttcctt 1080 aatggatcat ggcgcatatg gtgagctgtg ggcaaagtgc cttctagatg tctcgctggg 1140 caatgtggag ggggtagtca gcgaccctgc aaaagaactt gacattgcca tctctgatga 1200 tcctgaaaaa gataccccca aagaggcaaa gataacctat aggcgattca agcctgcctt 1260 aagttcaagt gcccgtcaag aattttctct ccaaggagtg gaggggaaga agtggaagag 1320 aatggcagca aaccagaaga aagagaagga gtcccatgag gcattgagcc ctttcttgga 1380 tgttgaagac attggggatt tcctaacatt caacaatctt cttgcagatt ctaggtatgg 1440 agatgagtcc gtccagagag cagtgtcaat cttgttggaa aaggcatctg ccatgcaaga 1500 cacagagctc actcatgccc tcaacgattc attcaagagg aacctaagca gtaatgtggt 1560 tcagtggtcc ctttgggtct cttgtttagc acaggagcta gctagtgctc tgaagcagca 1620 ctgcagggct ggtgagttca tcatcaagaa gctgaaattc tggcctatct atgtcattat 1680 caagccgacc aaatcatcat cccatatctt ctacagctta gggattcgca aggctgacgt 1740 gacaaggagg ctcactggca gagtcttctc tgataccatt gatgctgggg aatgggagct 1800 aacagagttc aaaagcctga agacatgcaa gcttacaaac cttgtcaact tgccatgcac 1860 catgctgaac tcaatagctt tctggagaga gaagctgggc gtggctccat ggttggttcg 1920 aaaaccttgt tcagagctca gggagcaggt gggcctgacc ttcctgatca gtctggagga 1980 caagtctaag actgaggaga tcatcacctt gacaaggtac acccagatgg agggctttgt 2040 ctctcccccc atgctgccta agccccaaaa gatgctaggg aaactggatg gacctctgag 2100 aactaagcta caggtgtacc tcctcaggaa gcatctggat tgcatggtgc gaattgcttc 2160 tcagccattc agcctaattc ctagagaggg gagggtagaa tggggaggaa cattccatgc 2220 catctcaggc cggtccacaa accttgagaa tatggtgaac agctggtaca ttgggtacta 2280 caagaacaaa gaggagtcaa cagagctaaa tgcccttgga gaaatgtata agaagatcgt 2340 ggagatggaa gaggacaagc ccagcagccc tgagtttcta gggtgggggg acactgattc 2400 ccctaagaag catgaattct cacggagctt cctcagagct gcttgctcat ctctggagag 2460 agaaattgct cagcgacatg gaagacaatg gaagcagaac cttgaggagc gtgtcctgag 2520 agagattggg accaagaaca ttctggacct tgcatccatg aaggccacaa gcaacttttc 2580 caaagactgg gagctctact cagaagtcca gaccaaagag taccataggt ccaaactgtt 2640 ggagaagatg gccacattga ttgagaaagg ggtcatgtgg tacattgatg ctgtgggtca 2700 ggcatggaag gcagttctag atgatgggtg catgcgaatc tgtctcttca agaagaatca 2760 gcatggtggc ctcagagaga tctacgttat ggatgcgaat gcccgacttg tgcagtttgg 2820 ggtcgagaca atggctaggt gtgtctgtga actgagccca catgagactg ttgccaaccc 2880 taggctcaag aattccatca tagagaacca tgggctgaag tcagcccgta gtcttggccc 2940 tggctccata aacataaact catccaatga cgccaagaag tggaatcagg ggcactacac 3000 aacaaagcta gctctagttc tttgttggtt catgccagcc aaattccaca gattcatttg 3060 ggctgccatt tccatgtttc ggagaaaaaa gatgatggtg gacctaaggt ttctagctca 3120 cctcagttct aaatctgagt ctaggtcatc tgatccgttt agggaagcaa tgacagatgc 3180 cttccatggt aatagggaag tctcatggat ggacaaaggg cgaacttaca taaagacaga 3240 gacagggatg atgcagggca tactgcactt tacatccagt ctcctccact cttgtgttca 3300 gagcttttac aagtcttatt tcgtctcgaa gctcaaagag ggctacatgg gggaaagcat 3360 cagtggggtg gtggacgtca tagaaggttc tgacgactct gcgatcatga tcagcatacg 3420 ccctaagtca gacatggatg aagtccgatc aaggttcttt gttgctaact tgctccactc 3480 tgtcaagttc ttaaaccctt tgtttgggat ttattcatca gagaaatcaa cagtgaacac 3540 agtgtattgt gtcgagtata actctgaatt ccatttccac aggcacttgg ttagacccac 3600 actgagatgg atagcagcgt ctcaccaaat ctcagagact gaagcccttg caagcaggca 3660 agaggattac tctaaccttc tgacccagtg cttggaaggg ggggcctcat tctctcttac 3720 ctacctcata cagtgcactc agctcctaca ccactacatg cttctaggac tatgcttaca 3780 tcccttgttt ggaaccttca tggggatgct gatatcagac ccagatccag ccctagggtt 3840 ctttctcatg gacaaccctg cattcgcagg gggagcagga tttagattca atctgtggag 3900 agcctgcaag acaacagacc tagggcggaa gtatgcatat tatttcaatg agatacaggg 3960 taaaacaaag ggagatgagg actacagggc tctggacgcc acatcgggag gaactctcag 4020 ccactctgtt atggtgtact ggggggacag gaagaagtat caggccttat tgagcaggat 4080 gggccttcct gaagactggg tggagcagat agatgagaat cctggagtcc tttacaggag 4140 agcagccaac aagaaggaac tactcttaaa gctggcagag aaggttcatt cacctggtgt 4200 gactagcagc ctgagtaaag ggcatgtggt gcctcgggtg gtggcagcag gagtatacct 4260 cctctcacgc cactgctttc gctttagctc aagcatccat ggcaggggct caacacagaa 4320 ggctagcctt ataaaactgt tgatgatgtc ttctatttct gccatgaagc acgggggctc 4380 actaaaccct aatcaggagc gaatgctctt ccctcaggct caggagtatg acagggtgtg 4440 cacattgctt gaggaagttg aacacctaac agggaaattt gttgttaggg agaggaacat 4500 tgtcaggagc cgcatagact tgttccaaga gccagttgac ttgcggtgca aggcagaaga 4560 cctggtgtct gaggtgtggt ttggcctgaa aaggactaag cttgggcccc gtctcctcaa 4620 ggaagagtgg gacaaactta gggcctcatt tgcatggttg agcacagacc catctgaaac 4680 attgagggat ggtccttttc ttagccatgt gcagtttaga aacttcatag cccacgttga 4740 tgccaaatca agatcagtca ggctcctagg tgcccccgtg aagaaatcag gcggggtcac 4800 cactataagc caagtagtca gaatgaactt cttccctggt tttagcctag aagctgagaa 4860 gagcttagac aatcaggaaa ggcttgagag catctccatc ctcaagcatg tcttgttcat 4920 ggtcttgaat ggcccataca ctgaggagta caagctggaa atgatcatag aggccttctc 4980 tactcttgtg ataccacagc catcagaggt catcaggaaa tcaaggacca tgactttatg 5040 ccttttatcg aattacttgt ctagtagggg tgggtccatt ctagaccaga ttgagagggc 5100 acagtcaggc actctaggag gattcagcaa gccccagaag acattcatta ggccaggagg 5160 tggtgttggc tacaagggaa aaggtgtgtg gactggagtg atggaggaca cccatgtcca 5220 aattctgata gatggagatg gggctagtaa ctggcttgag gagatcaggc tcagtagtga 5280 tgccaggctt tatgatgtca ttgaatccat ccgaaggtta tgtgatgacc ttgggatcaa 5340 caacagggta gcatctgcat atagaggtca ttgcatggtt aggctgagtg gattcaagat 5400 caagccagca tcaaggactg acggctgtcc agtcaggatt atggaaaggg gcttcaggat 5460 tagggaactc caaaacccag atgaggtcaa gatgagagtg aggggcgaca tccttaacct 5520 ctctgtcact atacaagaag gaagggtcat gaacatccta agctacaggc cgagagacac 5580 tgacatatca gagtcagccg cagcatacct ctggagcaat cgagacctct tctcctttgg 5640 gaagaaggag ccatcctgca gctggatctg cttgaaaact cttgacaatt gggcctggtc 5700 acatgcctca gttctcctgg caaatgatag gaagacccaa ggcattgaca atagagctat 5760 ggggaacatc ttcagggact gtctcgaggg ttctctaaga aagcaagggc tgatgaggtc 5820 aaaactcaca gagatggttg agaagaatgt agttccttta acaactcaag agcttgtcga 5880 catactggag gaggacattg acttttcaga tgtcatagct gtagagctct cagagggatc 5940 gcttgacatt gaatccatct ttgatggagc acctatcttg tggtctgctg aggtggaaga 6000 gtttggagaa ggagtggtgg ctgtgagcta ttccagtaag tactatcatc taaccctgat 6060 ggaccaagct gccatcacaa tgtgtgcaat catgggcaag gaaggatgta gagggctcct 6120 tactgagaag agatgcatgg cagccatacg agagcaggta cggccattcc tcatattcct 6180 acaaattcct gaggacagca tttcttgggt atctgatcag ttctgcgact ccaggggtct 6240 tgatgaagag agcaccatta tgtggggtta actttaaaac acggttggta cgcagccgat 6300 gtgtctgtgg gtgactaggg aatgttggtt ttagaaggat ttccttaaga tctgggcggt 6360 ctttgtgt 6368 //