ID HQ822124; SV 1; circular; genomic DNA; STD; VRL; 2600 BP. XX AC HQ822124; XX DT 11-APR-2011 (Rel. 108, Created) DT 24-FEB-2012 (Rel. 111, Last updated, Version 3) XX DE Sida yellow mottle virus [Cuba:Sancti Spiritus 159:2009] segment DNA-B, DE complete sequence. XX KW . XX OS Sida yellow mottle virus [Cuba:Sancti Spiritus 159:2009] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2600 RX DOI; 10.1007/s00705-011-1123-8. RX PUBMED; 21964921. RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT "Begomoviruses infecting weeds in Cuba: increased host range and a novel RT virus infecting Sida rhombifolia"; RL Arch. Virol. 157(1):141-146(2012). XX RN [2] RP 1-2600 RA Fiallo-Olive E., Martinez-Zubiaur Y., Moriones E., Navas-Castillo J.; RT ; RL Submitted (21-DEC-2010) to the INSDC. RL Departamento de Proteccion de Plantas, Centro Nacional de Sanidad RL Agropecuaria, Carretera de Tapaste km 3 1/2, San Jose de Las Lajas, La RL Habana 32 700, Cuba XX DR MD5; 1b2af04036709c5b516c3ef6226a8838. DR EuropePMC; PMC3784915; 24426288. XX FH Key Location/Qualifiers FH FT source 1..2600 FT /organism="Sida yellow mottle virus [Cuba:Sancti Spiritus FT 159:2009]" FT /segment="DNA-B" FT /host="Sida rhombifolia" FT /isolate="159" FT /mol_type="genomic DNA" FT /country="Cuba" FT /collected_by="E. Fiallo-Olive" FT /collection_date="May-2009" FT /db_xref="taxon:1003170" FT gene 403..1173 FT /gene="BV1" FT CDS 403..1173 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttling protein" FT /db_xref="GOA:F5BB92" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:F5BB92" FT /protein_id="AEA76649.1" FT /translation="MYPVKSKRGSFYYQRRFTSRNTVYNRSASTKRHDGKRRGGNSAKP FT NDEPKMSAQRIHENQYGPGYVMAHNSAVSSFITYPSLGKSDSSRSRSYIKLKRLRFKGT FT VKIERVQSEVNMDGSAPKVEGVFSLVVVVDRKPHLGPSGCLHTFDELFGARINSHGNLS FT IAPSLKDRFYIRHVFKRVLSVEKDTLMVDVEGSTSLSNRRYNCWSTFKDLECDSCKGVY FT ANVSKNALLIYYCWMSDTPAKASSFVSFDLDYIG" FT gene complement(1235..2116) FT /gene="BC1" FT CDS complement(1235..2116) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:F5BB93" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:F5BB93" FT /protein_id="AEA76650.1" FT /translation="MDSQLVNPPSAFNYIESHRDEYQLSHDLTDIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVGYGKWERKPIRCASMSRLGLRGPIEIRPGESWASRSTIGTAQSDAD FT SEVDNELHPYRHLNRLGTSVLDPGESASIVGAQRAESNITMSMGQLNELVRTTVQECIN FT SNCQPSQAKSLK" XX SQ Sequence 2600 BP; 644 A; 572 C; 635 G; 749 T; 0 other; accggatggc cgcgctttgg tgtccccccc ccctcccgtg gtggcgcact ctcacgctcc 60 cctccctggt gccgtgctca cacgcgctct ctcattggtg cgggtccttc accttccgtc 120 ttttcgactg tcctttaatt tgaattaaag gaaatggctt tctcgcgcga cttgctttta 180 ttatttgaat tattgtcgcg agattagtga gtatggccca ttgtacctgg tgaaggacgt 240 ggctaacttt ggaccaagct gctgagttta tttccgagtg atggtgaatt aacagtctat 300 atagtgggct gatcaggtat gtattgttta ttgtactcag ctgccctccc acgtttacat 360 cgtcagctat aattgtgttt aatcctcaat tattgtttga tcatgtatcc tgttaagagt 420 aaacgtggtt ctttttatta ccagcgacga tttacgtcac gtaacactgt gtataaccgc 480 tcagcgtcta ccaagagaca tgatgggaaa cgtcgaggag gtaattctgc taagcccaac 540 gatgagccca agatgtcagc ccaacgcata catgagaatc agtatgggcc aggttatgtt 600 atggcccata attcagctgt ctcgtcgttc atcacttatc ccagcttggg caagtcggac 660 tccagccgaa gcaggtccta tatcaagttg aaacgtctcc gttttaaagg gactgtgaag 720 atcgaacggg tacaatcgga agtgaacatg gacggttccg ctccgaaggt cgaaggagta 780 ttctcgcttg ttgttgttgt tgatcgtaaa ccacacttgg gtccctctgg atgtctgcat 840 acattcgacg agctattcgg ggcaaggatc aacagtcatg gcaacctcag cattgcccca 900 tctctgaagg accgattcta cataagacac gtgttcaaac gtgtactgtc ggttgagaag 960 gacacgctca tggtggatgt ggaagggtcc acatcactct ctaacaggcg atacaactgt 1020 tggtccacgt ttaaagacct tgaatgtgat tcatgcaagg gagtctatgc caacgtcagc 1080 aagaacgcct tgttaattta ttattgctgg atgtctgata cgcctgcaaa ggcatcctca 1140 tttgtatctt tcgatcttga ttatatcggt taactcaata aattgtgttt atctaaagat 1200 gattatcgta atatgtgaaa tggaaagata acatttattt caatgatttg gcctgagaag 1260 gctgacaatt actattgata cattcttgga ccgttgtccg aacaagctcg ttcaactggc 1320 ccattgacat tgtaatgttg gactccgctc tctgggctcc cacgatggag gcagactctc 1380 caggatccag gacgctggtc cccagcctgt ttagatgtct gtatggatgg agttcgttat 1440 ccacctccga gtccgcatct gactgggccg tgcctattgt actcctggaa gcccatgatt 1500 cacctggcct gatctcaatt gggccacgta acccaagtct ggacatggac gcacatctga 1560 tgggcttcct ttcccatttc ccataaccca catgggaaaa gtccacatct ttgtccgtga 1620 actgtttgga caagatcttc actgttggtg cccggaacgg gatgtcgacg gagtgtttcg 1680 ctgtggacaa tttcagcttc cctttgaact tggcgaagtg ggtccgctga tgaacattcg 1740 tatcgcacac cctgtagtac aacttccatg gaattgggtc ctttaacgag aagaacgaag 1800 ccgagaagta gtggagatct atgttgcatc tgatcggaaa tgtccatgac gcctgtaacg 1860 actcgttgtc cgtcatcctt ttgtcgtgga tctccacaat taccgtccct gtggcgttga 1920 tcggcacctg ttgcctatat tcaatgacgc agtggtcgat cttcatgcag ctacggctga 1980 gcctagctgt caactgagac gccgtggaag ggaattgcaa tattatatca gttaggtcat 2040 gggaaagctg atactcgtcc cggtgagatt ctatgtaatt gaaggcactt ggaggattaa 2100 ctaactgaga atccatatga agaagagagg ccgcgcagcg gaaccgattg ctgaggttga 2160 atcgggaaga agatgaacaa ccgatgaaca agaagaacaa gttatgaaca ggtactgtga 2220 tctcgaagaa ggtaaagtgt ttcttttctt tctgtgtttg agaatgctcg ttgatcttaa 2280 tcttatgctt acgaatatgg aagacgagaa agttgttcag gaattatgtt tttgagaaag 2340 aaaagagggt tgattaagag atagtagatt tctggaaatg aaagaggttg tttatgaacc 2400 cagagcgtct gggttgatgg gtatttaaat tgggaaagtg ttcatcaacc gatggcatta 2460 ttgtaataag agggggtacc ccaattggag tctctccaaa cttgctctat caattggggt 2520 ttggggtctc atttatacta ggagcctcta tagaactctc aatctggttc gcacacgtgg 2580 cggccatccg ctataatatt 2600 //