ID HQ822123; SV 1; circular; genomic DNA; STD; VRL; 2622 BP. XX AC HQ822123; XX DT 11-APR-2011 (Rel. 108, Created) DT 24-FEB-2012 (Rel. 111, Last updated, Version 3) XX DE Sida yellow mottle virus [Cuba:Sancti Spiritus 159:2009] segment DNA-A, DE complete sequence. XX KW . XX OS Sida yellow mottle virus [Cuba:Sancti Spiritus 159:2009] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2622 RX DOI; 10.1007/s00705-011-1123-8. RX PUBMED; 21964921. RA Fiallo-Olive E., Navas-Castillo J., Moriones E., Martinez-Zubiaur Y.; RT "Begomoviruses infecting weeds in Cuba: increased host range and a novel RT virus infecting Sida rhombifolia"; RL Arch. Virol. 157(1):141-146(2012). XX RN [2] RP 1-2622 RA Fiallo-Olive E., Martinez-Zubiaur Y., Moriones E., Navas-Castillo J.; RT ; RL Submitted (21-DEC-2010) to the INSDC. RL Departamento de Proteccion de Plantas, Centro Nacional de Sanidad RL Agropecuaria, Carretera de Tapaste km 3 1/2, San Jose de Las Lajas, La RL Habana 32 700, Cuba XX DR MD5; 0bf2544b1da8597aae77638537bfae6d. XX FH Key Location/Qualifiers FH FT source 1..2622 FT /organism="Sida yellow mottle virus [Cuba:Sancti Spiritus FT 159:2009]" FT /segment="DNA-A" FT /host="Sida rhombifolia" FT /isolate="159" FT /mol_type="genomic DNA" FT /country="Cuba" FT /collected_by="E. Fiallo-Olive" FT /collection_date="May-2009" FT /db_xref="taxon:1003170" FT gene 197..952 FT /gene="AV1" FT CDS 197..952 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:F5BB87" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:F5BB87" FT /protein_id="AEA76644.1" FT /translation="MPKRDLPWRSMAGTSKVSRNANYSPRAGSGPRGNKASEWVNRPMY FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIMN" FT gene complement(949..1347) FT /gene="AC3" FT CDS complement(949..1347) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancement protein" FT /db_xref="GOA:F5BB88" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:F5BB88" FT /protein_id="AEA76645.1" FT /translation="MDSRTGEFITARQAENGVYIWEIENPLYFKMYRVEDPLYTRTRVY FT HVQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSTYLARFRHLVNMYLDQLGVISLNN FT VIRAVRFATDRSYVNHVLENHSIKFKFY" FT gene complement(1094..1483) FT /gene="AC2" FT CDS complement(1094..1483) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /db_xref="GOA:F5BB89" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:F5BB89" FT /protein_id="AEA76646.1" FT /translation="MRSSSPSQPPSIKIAHRQAKKRAIRRRRIDLQCGCSIYFHIDCTG FT HGFTHRGIHHCTSGGEWRVYLGDRKSPVFQDVQSRGPVVHQNEGVSRTDTVQSQPEESV FT ASPQSLPELPSLDDIDDSFWVNLFS" FT gene complement(1395..2480) FT /gene="AC1" FT CDS complement(1395..2480) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:F5BB90" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:F5BB90" FT /protein_id="AEA76647.1" FT /translation="MPSVKRFKVSAKNYFLTYPQCSLSKEEALSQLQNLATPVNKKFIK FT ICRELHENGEPHLHVLVQFEGKYQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGCQSTNDTYAKALNASSVEEALQIIKEEQPQHFFLQHH FT NLVANAHRIFQKAPEPWVPPFQLSSFTNVPDEMQEWADEYFGRGSAARPDRPLSLIVEG FT DSRTGKTMWARALGPHNYLSGHLDFNGRVYSNAVEYNVIDDVAPQYLKLKHWKELLGAQ FT KDWQSNCKYGKPVQIKGGIPAIVLCNPGEGSSYKEFLDKEENAGLRNWTIKNAIFITLT FT AALYQDSTQTGQEKGDQEAQD" FT gene complement(2066..2323) FT /gene="AC4" FT CDS complement(2066..2323) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F5BB91" FT /protein_id="AEA76648.1" FT /translation="MGSLISMCLYNSRENTSARITDSSIWSPQPGQHISIRTYRELNLA FT PTSSPTSTRTEIHWNGGNSRSTVEVLEEAANRLTTRMPRH" XX SQ Sequence 2622 BP; 641 A; 606 C; 628 G; 747 T; 0 other; accggatggc cgcgcgcccc cccctggtgc cgtacactct cgcgcgatct ttaatttaaa 60 ttaaagcgta ctgctttgtg tttgtccaat catgttgcgt ctgacgagcc tagatatttg 120 caacaacttg ggccctaagt tgttgggtgt ccgttataaa ttaaagatga ctttggccca 180 caatctttaa ctcaaaatgc ctaagcgcga tctgccatgg cgctcgatgg cgggaacctc 240 aaaggttagc cgcaatgcta actattctcc tcgtgcaggt agtgggccaa gaggaaacaa 300 ggcctctgaa tgggtgaaca ggccaatgta caggaagccc aggatctacc ggacgctgag 360 gacccccgat gtgcccagag gctgtgaagg cccatgtaag gtccagtcct atgaacagcg 420 ccatgacatc tcacatgtcg ggaaggtcat gtgcatctcg gatgtgacac gtggtaatgg 480 catcacccat cgtgtgggta agcgtttctg tgttaagtct gtgtatatct tagggaagat 540 ctggatggac gagaacatca agctcaagaa ccacacgaac agtgtcatgt tctggttggt 600 cagagaccgt agaccgtatg gcacgcctat ggattttggt caggtgttta acatgttcga 660 caacgagcca agcactgcca cggtgaagaa cgatctccgc gatcgttacc aggttatgca 720 caagttctat ggcaaggtga ctggtggaca gtatgccagc aacgagcagg ctatagtcaa 780 gaggttctgg aaggtcaaca attatgtggt gtacaaccac caagaggctg gcaagtacga 840 gaatcacacg gagaacgccc tgttattgta tatggcatgt actcatgcat ctaaccctgt 900 gtatgcaact ctgaagattc ggatctattt ttacgattcg attatgaatt aataaaattt 960 gaattttatt gaatgatttt ccagtacatg atttacatac gatctgtctg tcgcgaatcg 1020 aacagctctg attacattgt ttaacgaaat gacgcctaac tgatctaaat acatgttgac 1080 taaatgccta aatctagcta aataagttga cccagaagct gtcatcgatg tcgtccagac 1140 ttggaagttc aggtaggctt tgtggagatg caacgctctc ctcaggttgt gattgaaccg 1200 tatctgtacg tgatacaccc tcgttctggt gtacaacggg tcctctactc tgtacatctt 1260 gaaatacagg ggattttcga tctcccagat atacacgcca ttctccgcct gacgtgcagt 1320 gatgaattcc cctgtgcgtg aatccatgtc ccgtacagtc tatgtggaag tagatggagc 1380 acccgcactg gagatcaatc ctgcgcctcc tgatcgccct tttcttggcc tgtctgtgtg 1440 ctatcttgat agagggcggc tgtgagggtg atgaagatcg cattcttgat agtccagttt 1500 cttagtcctg cattttcctc tttgtccagg aactctttat agctggaacc ctcaccagga 1560 ttgcaaagca cgattgctgg gattccacct ttaatttgaa caggcttacc gtatttgcaa 1620 tttgactgcc aatctttttg ggcccccagc aattctttcc agtgctttag ctttagatat 1680 tgcggtgcga cgtcatcaat gacgttatac tccaccgcgt ttgaatagac tcgaccattg 1740 aagtccaggt gtccactgag atagttatgt gggcctaacg cacgtgccca catcgtcttc 1800 cctgttcttg aatcaccttc tactatgaga cttaatggtc tatctggccg cgcagcggaa 1860 cccctaccaa aatactcatc ggcccattct tgcatctcgt ccggaacgtt agtgaatgag 1920 gagagttgaa acggaggtac ccacggttcc ggagccttct gaaatatccg atgagcattg 1980 gcaactaaat tgtgatgttg aaggaagaaa tgttgaggct gctcttcctt gattatttgc 2040 agcgcctctt ctacagaaga ggcattcaat gccttggcat acgtgtcgtt agtcgattgg 2100 cagcctcctc tagcacttct accgtcgatc tggaattccc cccattccag tgtatctccg 2160 tccttgtcga tgtaggactt gacgtcggag ctagatttag ctccctgtat gttcggatgg 2220 aaatgtgctg acctggttgg ggagaccaga tcgaagaatc tgttattctt gcactggtat 2280 tttccctcga attgtacaag cacatggaga tgaggctccc cattctcatg aagctctctg 2340 caaattttga tgaacttctt gttaactgga gttgctaggt tttgtaattg ggaaagtgcc 2400 tcttcttttg acagagagca ctgtggataa gtgaggaaat agtttttggc tgagacttta 2460 aaacgcttaa ccgatggcat ttttgtaata agaaggggta ccccaattgg agtctctcca 2520 aacttgctct atcaattggg gtttggggtc tcatttatac tagaggtttc tatagaactc 2580 tcaatctcgt tcgcacacgt ggcggccatc cgatataata tt 2622 //