ID   HQ731500; SV 1; linear; genomic RNA; STD; VRL; 1899 BP.
XX
AC   HQ731500;
XX
DT   03-APR-2013 (Rel. 116, Created)
DT   04-JUN-2013 (Rel. 117, Last updated, Version 2)
XX
DE   Rice black-streaked dwarf virus 2 isolate V segment S9, complete sequence.
XX
KW   .
XX
OS   Rice black-streaked dwarf virus 2
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1899
RX   PUBMED; 23704174.
RA   Xue J., Li J., Ta H.A., Zhang H.M., Yang J., Lv M.F., Meng Y., Li P.P.,
RA   Chen J.P.;
RT   "Complete genomic sequence of southern rice blacked-dwarf virus, a novel
RT   fijivirus, from Vietnam";
RL   Genome Announc 1(3):E00212-13(2013).
XX
RN   [2]
RP   1-1899
RA   Zhang H.;
RT   ;
RL   Submitted (20-DEC-2010) to the INSDC.
RL   Institution of Virology and Biotechnology, Zhejiang Academy of Agricultural
RL   Sciences, 198 Shiqiao Road, Hangzhou, Zhejiang 310021, China
XX
DR   MD5; 2489f3554937e26a61defa5f5ca3095b.
DR   EuropePMC; PMC4379580; 25807053.
DR   EuropePMC; PMC6486993; 31029143.
XX
CC   GenBank Accession Numbers HQ731492-HQ731501 represent sequences
CC   from the 10 segments of Rice black-streaked dwarf virus 2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1899
FT                   /organism="Rice black-streaked dwarf virus 2"
FT                   /segment="S9"
FT                   /isolate="V"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam"
FT                   /isolation_source="rice"
FT                   /db_xref="taxon:566568"
FT   CDS             52..1095
FT                   /codon_start=1
FT                   /product="nonstructural protein P9-1"
FT                   /db_xref="InterPro:IPR009268"
FT                   /db_xref="UniProtKB/TrEMBL:M4GP45"
FT                   /protein_id="AEV91055.1"
FT                   /translation="MADLERRTFGSYKIEELTIRTDQPTRNTNLSLSQSTENRLSTKKI
FT                   PLLDDGIFELLNYLIDGTNFNKTCYCGFNYSHLPNLERDFNIASLYVRENFEICTDQLD
FT                   LANYVRQPNISIKSPDFTVCLEYVLKTVVESESSTKDQKDDESQKPTSTDSTKNEQEKK
FT                   FVEMSLLPLLNRESEESLTEEILEGEGAVVNVLKLFIKGFLMHLGENPNSYDRQLTVEK
FT                   YRPLLVSIVGYEYLVGTTVPEKKINHIYYQLATFDNYPFDLLRFQLSSLISTPTSILER
FT                   ITKEGLFKIITSSTLRGATRQTVLFRGINGSESFLNIKKYRRFRTRIVGNADSVIKSDF
FT                   SSLKLDV"
FT   CDS             1159..1788
FT                   /codon_start=1
FT                   /product="nonstructural protein P9-2"
FT                   /db_xref="GOA:B6SCH4"
FT                   /db_xref="InterPro:IPR009650"
FT                   /db_xref="UniProtKB/TrEMBL:B6SCH4"
FT                   /protein_id="AEV91056.1"
FT                   /translation="MNPQSSVNIDTYTFNCPFELAKIQIESAKPIMQDFSDFDEIFERP
FT                   LSDSELDDRVEKLELDIEAKVDPVVRRKYGKVGHIMLMIFSFLFFGIFKLTLKMFYHLF
FT                   RCVCCNPLIRGIFSVVCTVVFYIVIFTLIYLVYFFFGDQILAVYHSLTEMSDSGLINST
FT                   KIEEKVNNIIHEGSLFFGSVDPNTGHFQEVEKQVFNGGTVNYTLFH"
XX
SQ   Sequence 1899 BP; 589 A; 335 C; 322 G; 653 T; 0 other;
     aagtttttaa gcctggaact gacacattcc tgcaggaacg aacgcaagag aatggcagac        60
     ctagagcgta gaacgtttgg atcatataaa atagaagaat tgacaattag aaccgaccaa       120
     ccaacaagaa atacaaacct ttcactttct caatcgaccg agaatcgtct ttcaaccaag       180
     aaaattcccc tactcgacga cggcattttt gaacttttga actacctcat tgatggaacc       240
     aatttcaaca aaacgtgtta ttgtggattt aattattctc atctcccaaa tctagaacgt       300
     gactttaaca tcgcttcttt gtatgtacgt gaaaatttcg aaatttgcac agatcaattg       360
     gacttggcta actacgttcg acaaccgaac atcagcatta aatctcctga cttcacagtt       420
     tgtttggaat acgttttgaa aactgtcgtt gaaagcgaat cctcaactaa agaccaaaaa       480
     gatgatgaat cacagaaacc cacctccact gattcaacta agaatgagca agaaaagaag       540
     tttgttgaaa tgtctttgct tcctctgtta aatcgcgaat ctgaagaatc tttgactgaa       600
     gaaattttag aaggtgaagg cgcagtggta aacgtactta aactattcat taaagggttt       660
     ttgatgcatt taggtgagaa tccaaattct tatgatcgtc aactaaccgt tgaaaaatat       720
     cgtccattat tggtttctat tgttggctat gaatatctag tcggtactac agttcctgaa       780
     aagaaaatca atcatattta ttatcaactt gcaacttttg ataattaccc attcgatctt       840
     ttaaggtttc aactttcttc actaatttcc actccaactt caatattgga aagaataaca       900
     aaagaaggtt tgtttaaaat tattacatca agcactttgc gaggtgccac acgtcaaact       960
     gttttgttca gaggtatcaa cggtagtgag tcatttttga acatcaaaaa atatcgtcgt      1020
     tttagaacca gaattgttgg taatgctgat agcgttatta agtccgactt ttcttcactt      1080
     aaattggacg tttgatactt tacttcttgg tcaatttcat tgtatatcaa tggttgaaga      1140
     atttttcttt tctacattat gaacccacag tcttcagtta atattgatac gtataccttc      1200
     aactgtccct ttgaattagc aaaaatccaa attgaatccg cgaaaccaat tatgcaagat      1260
     tttagtgatt ttgatgaaat ttttgaacgt cctttgtctg attcggaatt ggatgatcga      1320
     gttgaaaaat tggaattaga tattgaagcc aaagtcgatc ctgtggtaag aagaaaatac      1380
     ggtaaagttg gtcatataat gttaatgatt tttagctttc ttttctttgg gatttttaaa      1440
     ttaacgctta aaatgtttta tcatcttttt cggtgtgtat gttgtaatcc tttaattcga      1500
     ggaattttta gtgttgtttg tactgtagtt ttctacatag tcatttttac gcttatttat      1560
     ttagtttatt ttttctttgg tgatcaaatc cttgctgtat atcattcttt gaccgagatg      1620
     agcgattctg gtttaatcaa ctccaccaaa atcgaagaaa aggttaacaa catcattcac      1680
     gaaggttctt tattttttgg ttccgtcgat cctaatactg gccactttca agaagtcgaa      1740
     aaacaagtgt tcaatggagg tactgtaaat tatactttgt ttcactaagt ttctatttta      1800
     tgtgactctg aaaatattca cgctcgtaag tcgattttct tgcagttgtg tatacgctac      1860
     ccaacaaatt cgttctcaag ccggcttaca gctgatgtc                             1899
//