ID HQ728387; SV 1; linear; genomic RNA; STD; VRL; 2603 BP. XX AC HQ728387; XX DT 01-APR-2011 (Rel. 108, Created) DT 18-AUG-2011 (Rel. 109, Last updated, Version 4) XX DE Soybean vein necrosis virus isolate TN segment S, complete sequence. XX KW . XX OS Soybean vein necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus; OC Soybean vein necrosis orthotospovirus. XX RN [1] RP 1-2603 RX DOI; 10.1007/s11262-011-0621-9. RX PUBMED; 21604150. RA Zhou J., Kantartzi S.K., Wen R.H., Newman M., Hajimorad M.R., Rupe J.C., RA Tzanetakis I.E.; RT "Molecular characterization of a new tospovirus infecting soybean"; RL Virus Genes 43(2):289-295(2011). XX RN [2] RP 1-2603 RA Tzanetakis I.E.; RT ; RL Submitted (18-DEC-2010) to the INSDC. RL Department of Plant Pathology, Cell and Molecular Biology Program, RL University of Arkansas, Plant Pathology-Plant Sciences Building, 495 N. RL Campus Drive, Room 217, Fayetteville, AR 72701, USA XX DR MD5; 0628d23d23ca9aed498bf0dc9ab9bcb8. DR EuropePMC; PMC3371012; 22715400. DR EuropePMC; PMC4263035; 25465801. DR EuropePMC; PMC4718560; 26784931. XX FH Key Location/Qualifiers FH FT source 1..2603 FT /organism="Soybean vein necrosis virus" FT /segment="S" FT /host="soybean" FT /isolate="TN" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="Sep-2008" FT /db_xref="taxon:980895" FT CDS 59..1381 FT /codon_start=1 FT /product="nonstructural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:F2Y3N6" FT /protein_id="ADX96065.1" FT /translation="MQSLITLGRELGSQKNQKCVIDTYWLKTKFIDSSRFGSNYIQMFS FT DEHVQSGFRFNEPVEESYIEDPDTIVDMSSDEVFPGIGIRIIFDKEKVVFKIDHKSVNR FT LGVKHKGHLKLLEFENPNIIEGTVDKTLVSSIPGICAEDITVDDELTGLLPSMNITHMK FT EDSYKITKSNNCFFGKRNMMRRGWIGTGNVTSIHPVGYSMPASTNRCIGTLALKSLEST FT AKKGIRSTDISHAEIDINGLCNFHLFTSCKGDLGDKAWMKTLKFFHDDHERVFSIYIRT FT TSDIDNNISNILLIFKVLRFKRFATPKVVVSQDDDSAAEINLSEGSASGCFDLRTKSVV FT IVQSLMRIHNEFALSLSKFLKKKVIVYTLRDSLSFTKKVAEIDSRFLNYLEDSDGNIYL FT LSRTFQESLPLNRDSLSYFFDLQTFGWAANHAAGDLATYFE" FT CDS complement(1700..2533) FT /codon_start=1 FT /product="nucleocapsid protein" FT /db_xref="GOA:F2Y3N7" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:F2Y3N7" FT /protein_id="ADX96066.1" FT /translation="MPQTAGPSNAKPAKITESNLAKLLKFEEDIEFEKNSTGFKFSEFY FT KTHMGRKFRYASALTFLKNRKAIVNMCKKGTFNFDGQTVKLSVESGDDNSFTFKRLDSF FT LRVKMLEHNFAVFDGTNEEAKQSLCNDLATIPLVQAYGLTVKDKMSAKLAIMIGGSLPL FT LASITGCEAYCFGLAIFQDLKKEQLGIVNFDTKAQAAKVASVLDAKGFKFTEEKNQTLR FT LIAEILKDMAPQMRGVASLEKYNEQIGIISDIIGVHFEMPGKKDGKGKKSKEFSV" XX SQ Sequence 2603 BP; 786 A; 493 C; 467 G; 857 T; 0 other; agagcaaccg ccaggaaata aagaggaaat ccgatacact aatcatataa ccagaaaaat 60 gcagagcttg attactcttg gcagagagtt gggatcccaa aagaaccaga aatgtgtcat 120 agatacatat tggttgaaaa caaaatttat tgattccagc agatttggtt ccaattacat 180 ccagatgttc tctgatgaac atgtccaatc tggctttaga ttcaatgaac cagttgaaga 240 gagttatatt gaggatccag atactattgt cgacatgtcg agcgatgaag ttttcccagg 300 aattggcatt agaatcattt ttgataaaga gaaagttgtt ttcaaaatag accacaagtc 360 agtcaataga cttggtgtaa aacacaaagg gcacctcaag ttgttggaat ttgagaatcc 420 caatatcatt gaaggaacag ttgacaaaac tttggtgtct tcgattccag ggatatgtgc 480 tgaagatata actgttgatg acgagctaac tggcctcctg ccttcaatga acataaccca 540 tatgaaggaa gattcttaca aaatcacaaa atcaaacaac tgcttctttg gcaagagaaa 600 catgatgcgt agaggatgga taggcacagg aaatgttact agcatacacc cagtaggtta 660 ttctatgcct gcttccacca atagatgcat tggaacactt gctctaaaat ctttagagag 720 cactgcaaag aaaggtatta gaagtactga tatttcccat gctgagattg acataaatgg 780 tttatgcaac tttcatctct ttacaagctg caaaggtgat ctaggagata aagcttggat 840 gaaaacattg aaattctttc atgatgacca cgaaagggtc ttttcaattt atatcagaac 900 aacttctgac attgacaaca atattagcaa cattttgcta attttcaaag ttcttaggtt 960 caagaggttt gctacaccaa aggtggttgt gtcccaagat gatgactctg cagcagaaat 1020 caacttgtcg gaaggttccg catctggttg ttttgatctc aggactaaat cagtggtcat 1080 tgtccaatct ctgatgagaa tacataatga atttgcattg tcgctgtcca aattcctcaa 1140 aaagaaagtc atcgtgtaca ctctgcgtga ttctctttcc tttacaaaaa aagttgctga 1200 aatagattct agattcctga attatttgga ggattcggat gggaacattt atcttttgtc 1260 tagaacattt caagaatctt tacctctaaa tagggattca ttgtcatact tttttgatct 1320 ccaaaccttt ggttgggcag ctaaccatgc tgcaggagat cttgcaacct attttgaata 1380 agttcttctt aaatttcatt ttgtatttag aaatagacta gagatccaaa tttaagttat 1440 ataaaaacaa aaaccaaaaa aaatcaaaaa caaaaaacca aaaagagagg gttttccctc 1500 caaaaatggt caaaccattt ttgggagatt tctctcctct tttttttgtt tttttgtttt 1560 ttgatttttt tgttttttgc atttttattt attttatttt attttattta catgctagca 1620 aacttgttat tgttatctca acacatccgg aactctgaac agcaccacaa atctggctga 1680 agctttctgc taaacatgat taaacagaaa actcctttga tttcttgcct tttccatctt 1740 tctttccagg catttcaaaa tggaccccaa tgatatcaga aatgattcca atctgttcat 1800 tgtacttctc aagggatgca actcctctca tttggggtgc catgtccttc agtatctcag 1860 caatcaacct gagagtttga tttttctctt cagtgaattt aaagcccttt gcatccagca 1920 cagatgcaac tttagcagct tgagcctttg tgtcaaagtt gacaatacca agctgttctt 1980 tctttaggtc ctgaaagata gctaaaccaa aacaataggc ttcacaacct gtgattgatg 2040 ctagaagggg taagcttcca ccaatcatta tggcaagctt tgctgacatc ttatctttca 2100 cagtcagacc ataagcttgc acaagtggga tggttgctaa atcattgcac aagctttgtt 2160 tagcctcttc atttgttcca tcaaaaactg caaaattgtg ttcaagcatc ttcactctca 2220 aaaagctatc cagtctttta aaagtgaagc tattgtcatc accactctct acagacaatt 2280 taacagtttg tccgtcaaaa ttaaatgtcc cttttttgca catgttgaca atagcctttc 2340 tgtttttgag aaaggtcaat gcagatgcat acctgaattt gcgacccatg tgggttttgt 2400 agaactcgct gaacttgaat cctgtgctgt ttttctcaaa ttctatgtct tcttcaaatt 2460 tgagaagctt tgctaggttt gactcagtga tcttcgctgg ttttgcattg cttggtcctg 2520 ctgtttgtgg catcttgatt cttgttggtt atagatagtg tctcaacttt atatcttttt 2580 tctttaatcg tgccgaatgc tct 2603 //