Dbfetch

Dbfetch

ID   HQ704797; SV 1; linear; genomic RNA; STD; VRL; 1790 BP.
XX
AC   HQ704797;
XX
DT   27-JUL-2011 (Rel. 109, Created)
DT   27-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Carnation mottle virus isolate YXZ movement protein (P7), movement protein
DE   (P9), and coat protein (CP) genes, complete cds.
XX
KW   .
XX
OS   Carnation mottle virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphacarmovirus.
XX
RN   [1]
RP   1-1790
RA   Tong A.Z., Wang L.C., Li X.P., Kong B.H., Chen H.R., Cai H.;
RT   "Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate
RT   Yunnan, China";
RL   Unpublished.
XX
RN   [2]
RP   1-1790
RA   Tong A.Z., Wang L.C., Li X.P., Kong B.H., Chen H.R., Cai H.;
RT   ;
RL   Submitted (15-DEC-2010) to the INSDC.
RL   College of plant protection, Yunnan Agriculture University, Kunming, Yunnan
RL   650201, China
XX
DR   MD5; 0b3b575c9c673a3ef90d390157aaeede.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1790
FT                   /organism="Carnation mottle virus"
FT                   /host="carnation"
FT                   /isolate="YXZ"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Sep-2010"
FT                   /db_xref="taxon:11986"
FT   gene            349..534
FT                   /gene="P7"
FT   CDS             349..534
FT                   /codon_start=1
FT                   /gene="P7"
FT                   /product="movement protein"
FT                   /db_xref="GOA:G0YKZ4"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:G0YKZ4"
FT                   /protein_id="AEK77604.1"
FT                   /translation="MDIEPEIPVVEKQVLAGNRGKQKTRRSVAKDAIRKPASDSTNGGN
FT                   WVNVADKIEVHIHFNF"
FT   gene            440..694
FT                   /gene="P9"
FT   CDS             440..694
FT                   /codon_start=1
FT                   /gene="P9"
FT                   /product="movement protein"
FT                   /db_xref="GOA:Q9DJV3"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DJV3"
FT                   /protein_id="AEK77605.1"
FT                   /translation="MPSVNLHLIVLTGVIGLMLLIRLRCTFTSTFSLPPLVTLNQIIAL
FT                   SFCGLLLNSISRAERACYYNYSVDSSKQQHISISTPNGK"
FT   gene            684..1730
FT                   /gene="CP"
FT   CDS             684..1730
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:G0YKZ8"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR013669"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:G0YKZ8"
FT                   /protein_id="AEK77606.1"
FT                   /translation="MENKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAE
FT                   MLAGYTPAVLAFAPRRPRMTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSF
FT                   EDWVVSPRNVAVSPQLSLLAANFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTP
FT                   PTTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASVDAKLVDFGRIVLSTYGFD
FT                   KADTVVGELFIQYTIVLSDPTKTAKISQASNDKVPDGPTYVVPSVNGNELQLRVVAAGN
FT                   WCIIVRGTVEGGFTKPTLIGPGISGNVDHESARPIAVCELVTQMEGQILKITKTSAEQP
FT                   LQWVVYRM"
XX
SQ   Sequence 1790 BP; 520 A; 410 C; 475 G; 385 T; 0 other;
     acactggaac aacgaaacaa acgcaagaca gtggctaaag tcggtgggaa tgtgcggtct        60
     gcggattgcc gggggggttc cagttgtgca agagttctac caaaaatacg ttgaagcagc       120
     cggaaatgtg aaagagaaca agaatatcac agagaagagt agttctgggt tcttcatgat       180
     ggcggatcgc gctaagcggg gctattctgc tgtgtccgag gagtgccgat atagcttcta       240
     ccaggcattc ggcatcacac ccgaccagca gatcgcattg gagggggaga tcaagtctct       300
     taccatcaac accaatgtgg ggccccagtg tgaagcggca gattcactat ggatattgaa       360
     ccggaaatac cagtagttga aaagcaagtg ctcgctggaa ataggggaaa acaaaagaca       420
     cgtagatcgg tggccaaaga tgccatccgt aaacctgcat ctgatagtac taacgggggt       480
     aattgggtta atgttgctga taagattgag gtgcacattc acttcaactt ttagtttgcc       540
     cccactggta actttaaatc agataatagc gttgtcattt tgtggtcttc tattaaacag       600
     catctctcgg gcagaaagag cttgctacta caactactct gttgatagtt ctaaacaaca       660
     acacatttca ataagtacac caaatggaaa ataaaggaga aaagatcgcg atgaatccca       720
     ctgtgcaaac attggcgcag aagggggaca agttggccgt gaagttggtg acaagagggt       780
     gggcctctct gagtacgaac cagaagagga gagctgaaat gcttgctgga tacactccag       840
     cggtcctagc cttcgcaccc cgacgaccac ggatgacgaa ccctcctcca agaaccagta       900
     ggaattcacc aggacaagct ggaaagtcca tgacgatgag taagaccgaa ctattgagca       960
     ccgtcaaagg taccacgggt gttatcccaa gctttgaaga ctgggtcgtt tccccccgaa      1020
     acgtagccgt ctcccctcaa ctctcgctgc tggcggcgaa cttcaacaaa taccgcatca      1080
     ctgcgctcac tgtgaagtac tcacccgcgt gcagcttcga gaccaatggg agggtggctc      1140
     tgggattcaa cgacgacgct tcggacacac caccaaccac caaggttgga ttttacgatc      1200
     tgggcaaaca tgtggaaact gctgcacaga cagccaagga tctagtgata ccagtagacg      1260
     gcaaaacccg gttcatcagg gactcggcta gtgttgatgc caaactagtc gattttgggc      1320
     gaatagtctt gtcaacatac gggtttgaca aggctgatac tgtggtgggc gaattgttta      1380
     tacagtacac gattgtgctg agtgacccaa ccaagacggc caaaatttca caggcaagca      1440
     acgataaggt gccggacgga ccaacgtatg tggtcccttc ggtcaatggc aacgagctac      1500
     aactaagagt ggtagccgct gggaattggt gcattatagt gcggggtacg gttgagggag      1560
     gcttcaccaa acccacactt attgggccag gaatcagcgg taatgtggac catgaaagtg      1620
     ccagacctat cgccgtttgt gaattggtga cacaaatgga gggccaaata ttgaaaatca      1680
     ccaagacctc agcagaacaa ccactccaat gggttgttta taggatgtga atgcaaaaga      1740
     aaagtttgtt agacacacac ggcgggacgt gttgctagag ctgccactct                 1790
//