ID   HQ700826; SV 1; linear; genomic RNA; STD; VRL; 1366 BP.
XX
AC   HQ700826;
XX
DT   13-JUL-2012 (Rel. 113, Created)
DT   13-JUL-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Suakwa aphid-borne yellows virus isolate SABYV-PH12 RdRp protein (RdRp),
DE   coat protein (CP), and movement protein (MP) genes, partial cds.
XX
KW   .
XX
OS   Suakwa aphid-borne yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1366
RA   Knierim D., Tsai W.S., Dolores L.M., Kenyon L.;
RT   "First report of Suakwa aphid-borne yellows virus infecting cucurbit crops
RT   in the Philippines";
RL   Unpublished.
XX
RN   [2]
RP   1-1366
RA   Knierim D., Tsai W.S., Dolores L.M., Kenyon L.;
RT   ;
RL   Submitted (13-DEC-2010) to the INSDC.
RL   Virology, AVRDC - The World Vegetable Center, PO Box 42, Shanhua, Tainan
RL   74199, Taiwan
XX
DR   MD5; 8334d77d10ce979ed10a50706bdbba4e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1366
FT                   /organism="Suakwa aphid-borne yellows virus"
FT                   /host="Luffa acutangula (ridge patola)"
FT                   /isolate="SABYV-PH12"
FT                   /mol_type="genomic RNA"
FT                   /country="Philippines:Pangasinan province"
FT                   /collection_date="29-Jun-2010"
FT                   /db_xref="taxon:646010"
FT   gene            <1..579
FT                   /gene="RdRp"
FT   CDS             <1..579
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="RdRp protein"
FT                   /db_xref="GOA:I6MCP9"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:I6MCP9"
FT                   /protein_id="AEK07953.1"
FT                   /translation="SVSSWMLEDDMEVRNNLTINNNELTRRLRACWLKCISNSVICLSD
FT                   GTLLAQEFPGIQKSGSYNTSSTNSRVRVMLSIYAGASWAIAMGDDALESADTIIPLYEQ
FT                   YGLKVEVSDKLEFCSHEFKSSSLAIPTNIGKMLYKLIHGYEIFPGMSSIQVTINYLTAC
FT                   YSVLNELRHVPEAASLVAQCLAPVEAQKV"
FT   misc_feature    580..777
FT                   /note="intergenic NCR"
FT   gene            778..>1366
FT                   /gene="CP"
FT   CDS             778..>1366
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:I6MCQ0"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:I6MCQ0"
FT                   /protein_id="AEK07954.1"
FT                   /translation="MNTVVVRNRNGMGRRRRNSRRNAKGNRVVVVQAPGAPQRGRRRRR
FT                   NGRRPSRGGRARGTSQGETFVFSKDNLTGSSSGAITFGPSLSDSPAFSSGILKAYHEYK
FT                   ISMVKLEFISEASSTSSGSISYELDPHCKLSSLQSTVNKFGITKSGSRTWSAKFINGME
FT                   WHDATEDQFRILYKGNGSSSTAGSFRITIRCQV"
FT   gene            806..>1366
FT                   /gene="MP"
FT   CDS             806..>1366
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:I6MCQ1"
FT                   /protein_id="AEK07955.1"
FT                   /translation="MAWEEGEGIAGAMQKATAWLWSKPLGLHSAEDDDDETVDALLEEA
FT                   ELEEQAKAKHSYSAKTISRAVPLEQSHSGRLYQTARHSALEYSRPTMSIKSQWLSWSSS
FT                   PRPLPPPQVPSLMSWTPIANLAPSNPRLINSVSQRVDHEHGALSSLTGWNGTTPQRINS
FT                   ESFTKETEVPQRRALLELQSGAKS"
XX
SQ   Sequence 1366 BP; 382 A; 341 C; 319 G; 324 T; 0 other;
     agcgtctcat cgtggatgct cgaggatgat atggaggtca ggaacaacct caccatcaat        60
     aataacgagc tcaccaggcg ccttcgcgca tgctggttga agtgcatatc gaactctgtg       120
     atatgcctgt ccgatgggac tttgctagcc caggagttcc ccggtataca gaaatcgggc       180
     tcctacaaca ccagctctac caactcaaga gtgagagtga tgctctccat ttacgctggt       240
     gcatcttggg ctatagcaat gggcgatgac gcccttgagt ccgctgatac gataatccca       300
     ttatatgagc aatacggact caaagtcgag gtctctgaca aactggaatt ttgttctcat       360
     gagttcaaaa gttcgagcct cgccatcccc acgaatatag ggaaaatgct ttacaagctc       420
     atacatggat atgagatctt cccggggatg tccagcattc aggtcactat caattatttg       480
     actgcctgtt attcagttct aaacgaactg cgtcatgtac ctgaagctgc ttcacttgtc       540
     gcgcagtgcc tcgctccagt cgaggcacaa aaagtttaaa caaaagcgcg cactcacaac       600
     tagccggaaa tacgttgttg caattgccgg aagttaaagt caactacaac ataggccaac       660
     cagatttcaa gtttttagca ggatttactt cgggcttcct gatagctgta ccaatttcag       720
     cacttggcct atatttgatc tacctaaaga tttctaaaca cgtgcaatcg atcgttaatg       780
     aatacggtcg tggttagaaa tcgaaatggc atgggaagaa ggagaaggaa tagccggcgc       840
     aatgcaaaag gcaaccgcgt ggttgtggtc caagcccctg gggctccaca gcgcggaaga       900
     cgacgacgac gaaacggtcg acgcccttct cgaggaggca gagctagagg aacaagccaa       960
     ggcgaaacat tcgtattcag caaagacaat ctcacgggca gttcctctgg agcaatcaca      1020
     ttcgggccgt ctttatcaga cagcccggca ttcagctctg gaatactcaa ggcctaccat      1080
     gagtataaaa tctcaatggt taagttggag ttcatctccg aggcctcttc cacctcctca      1140
     ggttccatct cttatgagtt ggacccccat tgcaaactta gctccctcca atccacggtt      1200
     aataaattcg gtatcacaaa gagtggatca cgaacatgga gcgctaagtt cattaacggg      1260
     atggaatggc acgacgccac agaggatcaa ttccgaatcc tttacaaagg aaacggaagt      1320
     tcctcaacgg cgggctcttt tagaattaca atcaggtgcc aagtcc                     1366
//