ID   HQ700825; SV 1; linear; genomic RNA; STD; VRL; 1366 BP.
XX
AC   HQ700825;
XX
DT   13-JUL-2012 (Rel. 113, Created)
DT   13-JUL-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Suakwa aphid-borne yellows virus isolate SABYV-PH11 RdRp protein (RdRp),
DE   coat protein (CP), and movement protein (MP) genes, partial cds.
XX
KW   .
XX
OS   Suakwa aphid-borne yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1366
RA   Knierim D., Tsai W.S., Dolores L.M., Kenyon L.;
RT   "First report of Suakwa aphid-borne yellows virus infecting cucurbit crops
RT   in the Philippines";
RL   Unpublished.
XX
RN   [2]
RP   1-1366
RA   Knierim D., Tsai W.S., Dolores L.M., Kenyon L.;
RT   ;
RL   Submitted (13-DEC-2010) to the INSDC.
RL   Virology, AVRDC - The World Vegetable Center, PO Box 42, Shanhua, Tainan
RL   74199, Taiwan
XX
DR   MD5; 34491a48be27ce59b69e7ceccb9fa01c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1366
FT                   /organism="Suakwa aphid-borne yellows virus"
FT                   /host="Luffa acutangula (ridge patola)"
FT                   /isolate="SABYV-PH11"
FT                   /mol_type="genomic RNA"
FT                   /country="Philippines:Pangasinan province"
FT                   /collection_date="29-Jun-2010"
FT                   /db_xref="taxon:646010"
FT   gene            <1..579
FT                   /gene="RdRp"
FT   CDS             <1..579
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="RdRp protein"
FT                   /db_xref="GOA:I6MCP6"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="UniProtKB/TrEMBL:I6MCP6"
FT                   /protein_id="AEK07950.1"
FT                   /translation="SVSSWMLEDDMEVRNNLTINNNELTRRLRACWLKCISNSVICLSD
FT                   GTLLAQEFPGIQKSGSYNTSSTNSRVRVMLSIYAGASWAIAMGDDALESADTIIPLYEQ
FT                   YGLKVEVSDKLEFCSHEFKSSSLAIPTNIGKMLYKLIHGYEIFPGMSSIQVTINYLTAC
FT                   YSVLNELRHVPEAASLVAQCLAPVEAQKV"
FT   misc_feature    580..777
FT                   /note="intergenic NCR"
FT   gene            778..>1366
FT                   /gene="CP"
FT   CDS             778..>1366
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:I6MCP7"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:I6MCP7"
FT                   /protein_id="AEK07951.1"
FT                   /translation="MNTVVVRNRNGMGRRRRNSRRNAKGNRVVVVQAPGAPQRGRRRRR
FT                   NGRRPSRGGRARGTSQGETFVFSKDNLTGSSSGAITFGPSLSDSPAFSSGILKAYHEYK
FT                   ISMVKLEFISEASSTSSGSISYELDPHCKLSSLQSTVNKFGITKSGSRTWSAKFINGME
FT                   WHDATEDQFRILYKGNGSSSTAGSFRITIRCQV"
FT   gene            806..>1366
FT                   /gene="MP"
FT   CDS             806..>1366
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:I6MCP8"
FT                   /protein_id="AEK07952.1"
FT                   /translation="MAWEEGEGIAGAMQKATAWLWSKPLGLHSAEDDDDETVDALLEEA
FT                   ELEEQAKAKHSYSAKTISRAVPLEQSRSGRLYQTAQHSALEYSRPTMSIKSQWLSWSSS
FT                   PRPLPPPPVPSLMSWTPIANLAPSNPRLINSVSQRVDHEHGALSLLTGWNGTTPQRINS
FT                   ESFTKETEVPQRRALLELPSGARS"
XX
SQ   Sequence 1366 BP; 382 A; 344 C; 319 G; 321 T; 0 other;
     agcgtctcat cgtggatgct cgaggatgat atggaggtca ggaacaacct caccatcaat        60
     aataacgagc tcaccaggcg ccttcgcgca tgctggttga agtgcatatc gaactctgtg       120
     atatgcctgt ccgatgggac tttgctagcc caggagttcc ccggtataca gaaatcgggc       180
     tcttacaaca ccagctctac caactcaaga gtgagagtaa tgctctccat ctacgctggt       240
     gcatcctggg ctatagcaat gggcgatgac gcccttgagt ccgctgatac gataatccca       300
     ttatatgagc aatacggact caaagtcgag gtctctgaca aactggaatt ttgttctcac       360
     gagttcaaaa gttcgagcct cgccatcccc acgaatatag ggaaaatgct ttacaagctc       420
     atacacggat atgagatctt cccggggatg tccagcattc aggtcactat aaattatttg       480
     actgcctgtt actcagttct aaacgaactg cgtcatgtac ctgaagctgc ttcacttgtc       540
     gcgcagtgcc tcgctccagt cgaggcacaa aaagtttaaa caaaagcgcg cactcaaaac       600
     tagccggaaa tacgttgttg caattgccgg aagttaaagt caactacaac ataggccaac       660
     cagatttcaa gtttttagca ggatttactt cgggcttcct gatagctgta ccaatttcag       720
     cacttggcct atatttgatc tacctaaaga tttctaaaca cgtgcaatcg atcgttaatg       780
     aatacggtcg tggttagaaa tcgaaatggc atgggaagaa ggagaaggaa tagccggcgc       840
     aatgcaaaag gcaaccgcgt ggttgtggtc caagcccctg gggctccaca gcgcggaaga       900
     cgacgacgac gaaacggtcg acgcccttct cgaggaggca gagctagagg aacaagccaa       960
     ggcgaaacat tcgtattcag caaagacaat ctcacgggca gttcctctgg agcaatcacg      1020
     ttcgggccgt ctttatcaga cagcccagca ttcagctctg gaatactcaa ggcctaccat      1080
     gagtataaaa tctcaatggt taagttggag ttcatctccg aggcctcttc cacctcctcc      1140
     ggttccatct cttatgagtt ggacccccat tgcaaactta gctccctcca atccacggtt      1200
     aataaattcg gtatcacaaa gagtggatca cgaacatgga gcgctaagtt tattaacggg      1260
     atggaatggc acgacgccac agaggatcaa ttccgaatcc tttacaaagg aaacggaagt      1320
     tcctcaacgg cgggctcttt tagaattacc atcaggtgcc aggtcc                     1366
//