ID   HQ680396; SV 1; linear; genomic RNA; STD; VRL; 1647 BP.
XX
AC   HQ680396;
XX
DT   10-MAY-2011 (Rel. 108, Created)
DT   17-APR-2014 (Rel. 120, Last updated, Version 2)
XX
DE   Velvet tobacco mottle virus isolate 15 Strz RNA dependent RNA polymerase
DE   gene, complete cds.
XX
KW   .
XX
OS   Velvet tobacco mottle virus
OC   Viruses; Riboviria; Solemoviridae; Sobemovirus.
XX
RN   [1]
RP   1-1647
RX   DOI; 10.1007/s11262-013-1007-y.
RX   PUBMED; 24233651.
RA   Arthur K., Collins N., Yazarlou A., Randles J.;
RT   "Nucleotide sequence diversity in Velvet tobacco mottle virus: a virus with
RT   a unique Australian pathosystem";
RL   Virus Genes 48(1):168-173(2014).
XX
RN   [2]
RP   1-1647
RA   Arthur K.R., Randles J.W.;
RT   ;
RL   Submitted (02-DEC-2010) to the INSDC.
RL   School of Agriculture, Food and Wine, University of Adelaide, Waite Rd,
RL   Adelaide, SA 5064, Australia
XX
DR   MD5; 273ffd86a27b3adf88a9dce38fdc7cbc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1647
FT                   /organism="Velvet tobacco mottle virus"
FT                   /host="Nicotiana clevelandii"
FT                   /isolate="15 Strz"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="John Randles"
FT                   /collection_date="02-Nov-1984"
FT                   /db_xref="taxon:12473"
FT   CDS             1..1647
FT                   /codon_start=1
FT                   /product="RNA dependent RNA polymerase"
FT                   /note="P2b; RdRp"
FT                   /db_xref="GOA:F5B9B4"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:F5B9B4"
FT                   /protein_id="AEE36660.1"
FT                   /translation="MGFNYVGVSSCKFREGSKHTTRGAIGSAEQVFPELKQYGWPERGS
FT                   KAEFDSLLLQASRFRRTSCPEQTERKCEVLAEKYPKSRAHRCFRRENFCQRQLLREQIE
FT                   ATTTSPEINDKASPGSPWSRLEKTNGEFISRFKDLLIEAVLRRVLLLASTPTSEILCMS
FT                   ASDLVRASLVDPVRLFVKQEPHTKKKLNERRFRLISSVSIVDQIIERLLFGPQNRLEIA
FT                   LWHQIPSKPGMGLSARTQADLLWNELFAKSEIAPAAEADISGFDWSVQEWELWADLSMR
FT                   ISLCEDMHDGLRRLMVNRYRCFMLSCFQLSNGELYEQVEPGLMKSGSYCTSSSNSRIRC
FT                   LMGYLIGAPWIIAMGDDSVEGYVRDAKSKYEELGHTCKEYELCDVDSDGALRSVNFCSH
FT                   LISRNKFWLTSWPKTLYRFLDSPSENFHDLERELGSCPKWAKIKDYCCQVGLVPDKTYW
FT                   EEDHPADYVEETHQEPGQADDTGNLAERADFCSVPTTETPKVDAARAEFYSYGPNGWSC
FT                   DIPEATHVNQWPLWGYSSSFRGGFSSPIRDY"
XX
SQ   Sequence 1647 BP; 426 A; 370 C; 428 G; 423 T; 0 other;
     atgggattca actatgttgg agtctcgtct tgcaagttta gagagggctc taagcacact        60
     actcgcggag caatcggttc tgctgagcaa gttttcccag aactcaagca gtatggttgg       120
     ccagaaagag gctctaaagc cgaattcgat tccctcctcc tccaagccag ccgctttcgg       180
     agaacctcct gtccagagca aaccgagcgt aaatgcgaag tcctcgctga gaagtacccc       240
     aaaagtagag cccaccgttg tttcaggaga gaaaacttct gtcagcgcca gctcctcagg       300
     gaacaaatcg aagcgacgac gacgtcgccg gaaatcaacg acaaagccag ccccggctcc       360
     ccctggtcaa gacttgaaaa gaccaacggc gagttcatct cccgtttcaa agacctctta       420
     attgaggcag tgttgaggcg agttttattg cttgcctcca ctccaaccag tgagattctg       480
     tgtatgtctg cttcagatct cgttagagct agcttagtgg atcccgtgcg attgtttgtc       540
     aagcaggaac cccacacgaa gaagaagctg aatgagcgcc gctttaggct tatttcgtct       600
     gtgtctatag ttgatcagat aatcgagaga ttattgtttg gtcctcagaa caggcttgag       660
     attgccttat ggcatcagat accttccaaa ccaggaatgg gactgagcgc tcgtacgcaa       720
     gctgatttgt tgtggaatga gttattcgca aagagcgaga tcgcccctgc ggccgaagct       780
     gatatttcag gatttgactg gtctgtgcag gaatgggagt tatgggccga tctaagcatg       840
     aggatctcct tgtgcgaaga tatgcatgat ggtctacgga ggttgatggt taatagatac       900
     cgttgcttta tgctctcttg cttccaattg tcgaatgggg aattgtatga acaagttgag       960
     cctggactta tgaagtctgg ttcctactgc acttcctctt ccaactccag aatcaggtgc      1020
     ctaatgggtt atctaattgg agctccctgg ataatagcca tgggggatga ttctgttgag      1080
     ggttatgtga gagacgcgaa aagtaagtat gaggaattag gacacacttg taaggaatac      1140
     gagttgtgtg atgttgattc agatggcgcg ttgagatctg tgaacttttg ttcacatttg      1200
     atttcccgca ataagttttg gctcacgagt tggcctaaaa ccttgtacag gttcctagac      1260
     tctccctctg aaaattttca tgatcttgaa agggaacttg gctcatgtcc caagtgggcc      1320
     aagataaagg attattgttg tcaggtagga ctggtccctg acaaaacata ttgggaagaa      1380
     gatcaccctg ctgactatgt cgaagaaact caccaagaac caggtcaagc agatgataca      1440
     ggcaaccttg ccgaaagagc agacttctgc tcggtcccga cgacggagac gccgaaggtc      1500
     gacgcagcaa gggcagagtt ctacagttat ggccccaatg gctggagctg tgatataccg      1560
     gaagcgaccc atgttaatca atggccgctc tggggttaca gttcgtcatt cagaggtggt      1620
     tttagtagtc caatccggga ctactaa                                          1647
//