ID   HQ680395; SV 1; linear; genomic RNA; STD; VRL; 1647 BP.
XX
AC   HQ680395;
XX
DT   10-MAY-2011 (Rel. 108, Created)
DT   17-APR-2014 (Rel. 120, Last updated, Version 2)
XX
DE   Velvet tobacco mottle virus isolate Cunnamulla RNA dependent RNA polymerase
DE   gene, complete cds.
XX
KW   .
XX
OS   Velvet tobacco mottle virus
OC   Viruses; Riboviria; Solemoviridae; Sobemovirus.
XX
RN   [1]
RP   1-1647
RX   DOI; 10.1007/s11262-013-1007-y.
RX   PUBMED; 24233651.
RA   Arthur K., Collins N., Yazarlou A., Randles J.;
RT   "Nucleotide sequence diversity in Velvet tobacco mottle virus: a virus with
RT   a unique Australian pathosystem";
RL   Virus Genes 48(1):168-173(2014).
XX
RN   [2]
RP   1-1647
RA   Arthur K.R., Randles J.W.;
RT   ;
RL   Submitted (02-DEC-2010) to the INSDC.
RL   School of Agriculture, Food and Wine, University of Adelaide, Waite Rd,
RL   Adelaide, SA 5064, Australia
XX
DR   MD5; 3a5e58a84927fb1c03eac38ec6a88ccb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1647
FT                   /organism="Velvet tobacco mottle virus"
FT                   /host="Nicotiana clevelandii"
FT                   /isolate="Cunnamulla"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Cunnamulla, QLD"
FT                   /collected_by="G. Behncken"
FT                   /collection_date="23-Aug-1982"
FT                   /db_xref="taxon:12473"
FT   CDS             1..1647
FT                   /codon_start=1
FT                   /product="RNA dependent RNA polymerase"
FT                   /note="P2b; RdRp"
FT                   /db_xref="GOA:F5B9B3"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:F5B9B3"
FT                   /protein_id="AEE36659.1"
FT                   /translation="MGFNYVGVSSCKFREGSKHAARGAISSAEQVFPELKQYGWPERGS
FT                   KAEFDSLLLQAGRFRRTSCPEQTERKCEVLAEKYPKSRAHRCFRRENFCQRQLLREQIE
FT                   ATTTSPEINDKASPGSPWSRLEKTNGELISRFKDLLIEAVLRRVLLLASTPTSEILCMS
FT                   ASDLVRANLVDPVRLFVKQEPHTKKKLNERRFRLISSVSIVDQIIERLLFGPQNRLEIA
FT                   LRHQIPSKPGMGLSARTQADLLWNELFAKSEIAPAAEADISGFDWSVQEWELWADLSMR
FT                   ISLCEDMHDGLRRLMVNRYRCFMLSCFQLSNGELYEQVEPGLMKSGSYCTSSSNSRIRC
FT                   LMGHLIGAPWIIAMGDDSVEGYVRDAKSKYEELGHTCKEYELCDVDTSGALRSVNFCSH
FT                   LISRNKFWLTSWPKTLYRFLDSPSENFHDLERELGSCPKWAKIKDYCCQVGLVPDKTYW
FT                   EEDHPADYVEETHQEPSQADDTGNLAERADFCSVPTTETPKVDAARAEFYSYGPNGWSC
FT                   DIPEATYANQWPLWGYSSSFGGGFGSPIRDY"
XX
SQ   Sequence 1647 BP; 428 A; 374 C; 428 G; 417 T; 0 other;
     atgggattca actatgttgg agtctcgtct tgcaagttta gagagggctc taagcacgct        60
     gctcgcggag caatcagttc tgctgagcaa gttttcccag aactcaaaca gtatggttgg       120
     ccagaaagag gctctaaagc cgaatttgat tccctcctcc tccaagccgg ccgtttccgg       180
     agaacctcct gtccagagca aaccgagcgt aaatgcgaag tcctcgctga gaagtacccc       240
     aaaagtagag cccaccgttg cttcaggaga gaaaacttct gtcaacgcca gctcctcagg       300
     gaacaaatcg aagcgacgac gacgtcgccg gaaatcaacg acaaagccag ccccggctcc       360
     ccctggtcaa gacttgaaaa gaccaatggt gagctcatct cccgtttcaa agacctctta       420
     attgaggcag tgttgaggcg agttttatta cttgcctcca ctccaaccag tgagattttg       480
     tgcatgtccg cttcagatct cgttagagct aacttagtgg atcctgtgcg attgttcgtc       540
     aagcaggaac cccacacgaa gaagaagctg aatgagcgcc gctttaggct tatctcgtct       600
     gtgtctatag ttgatcagat aatcgagaga ttattgtttg gtcctcagaa caggcttgag       660
     attgccttac ggcatcagat accttccaaa cctggaatgg gattgagcgc tcgtacgcaa       720
     gctgatttgt tgtggaatga gttattcgca aagagcgaga ttgcccctgc ggctgaagct       780
     gatatttcag gatttgactg gtctgtgcag gaatgggagc tatgggccga tctaagcatg       840
     aggatctctt tgtgtgaaga tatgcacgat ggtctgcgga ggttgatggt taatagatac       900
     cgttgcttta tgctctcttg cttccaattg tcgaatgggg aactgtacga acaagttgag       960
     cctggactta tgaagtctgg ttcctactgc acttcctcct ccaactccag aatcaggtgc      1020
     ctaatgggcc atctaattgg agctccttgg ataatagcca tgggagatga ttctgttgag      1080
     ggatatgtaa gagatgcgaa aagcaaatat gaggaattgg gacacacttg taaggaatat      1140
     gagttgtgtg atgtcgatac gagtggcgcg ttgagatctg tgaacttctg ttcgcatctg      1200
     atttcccgca acaagttttg gctcacaagt tggcccaaaa ctttgtatag gttcttagac      1260
     tctccctccg aaaattttca tgatcttgaa agggaacttg ggtcatgtcc caagtgggcc      1320
     aagataaagg attattgttg tcaggtagga ctggtccctg acaaaacata ttgggaagaa      1380
     gatcaccctg ctgactatgt cgaagaaact caccaagaac caagtcaagc agatgataca      1440
     ggcaaccttg ccgaaagagc agacttctgc tcggtcccga cgacggagac gccgaaggtc      1500
     gacgcagcaa gggcagagtt ctacagttat ggccccaatg gctggagctg tgatataccg      1560
     gaagcgacct atgctaatca atggccgctc tggggttaca gttcgtcatt cggaggtggt      1620
     tttggtagtc caatccggga ctactaa                                          1647
//