ID   HQ680393; SV 1; linear; genomic RNA; STD; VRL; 1647 BP.
XX
AC   HQ680393;
XX
DT   10-MAY-2011 (Rel. 108, Created)
DT   17-APR-2014 (Rel. 120, Last updated, Version 2)
XX
DE   Velvet tobacco mottle virus isolate 18 Strz RNA dependent RNA polymerase
DE   gene, complete cds.
XX
KW   .
XX
OS   Velvet tobacco mottle virus
OC   Viruses; Riboviria; Solemoviridae; Sobemovirus.
XX
RN   [1]
RP   1-1647
RX   DOI; 10.1007/s11262-013-1007-y.
RX   PUBMED; 24233651.
RA   Arthur K., Collins N., Yazarlou A., Randles J.;
RT   "Nucleotide sequence diversity in Velvet tobacco mottle virus: a virus with
RT   a unique Australian pathosystem";
RL   Virus Genes 48(1):168-173(2014).
XX
RN   [2]
RP   1-1647
RA   Arthur K.R., Randles J.W.;
RT   ;
RL   Submitted (02-DEC-2010) to the INSDC.
RL   School of Agriculture, Food and Wine, University of Adelaide, Waite Rd,
RL   Adelaide, SA 5064, Australia
XX
DR   MD5; de62e6a2aa589f8a014cc14487793fc0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1647
FT                   /organism="Velvet tobacco mottle virus"
FT                   /host="Nicotiana velutina"
FT                   /isolate="18 Strz"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="John Randles"
FT                   /collection_date="Jul-1979"
FT                   /db_xref="taxon:12473"
FT   CDS             1..1647
FT                   /codon_start=1
FT                   /product="RNA dependent RNA polymerase"
FT                   /note="P2b; RdRp"
FT                   /db_xref="GOA:F5B9B1"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:F5B9B1"
FT                   /protein_id="AEE36657.1"
FT                   /translation="MGFNYVGVSSCKFREGSKHAARGAISSAEQVFPELKQYGWPERGS
FT                   KAEFDSLLLQASRFRRTSCPEQTERKCEVLAEKYPKSRAHRCFRRENFCQRQLLREQIE
FT                   ATTTSPEINDKASPGSPWSRLEKTNGELISRFKDLLIEAVLRRVLLLASTPTSEILCMS
FT                   ASDLVRANLVDPVRLFVKQEPHTKKKLNERRFRLISSVSIVDQIIERLLFGPQNRLEIA
FT                   LWHQIPSKPGMGLSARTQADLLWNELFAKSEIAPAAEADISGFDWSVQEWELWADLSMR
FT                   ISLCEDMHDGLRRLMVNRYRCFMLSCFQLSNGELYEQVEPGLMKSGSYCTSSSNSRIRC
FT                   LMGYLIGAPWIIAMGDDSVEGYVRDAKGKYEELGHTCKEYELCDVDSDGALRSVNFCSH
FT                   LISRNKFWLTSWPKTLYRFLDSPSENFHDLERELGSCPKWAKIKDYCCQVGLVPDKIYW
FT                   EEDHPADYVEETHQEPGQADDTGNLAERADFCSVPTTETPKVDAARAEFYSYGPNGWSC
FT                   DIPEATHVNQWPLWGYSSSFGGGFGSPIRDY"
XX
SQ   Sequence 1647 BP; 423 A; 374 C; 431 G; 419 T; 0 other;
     atgggattca actatgttgg agtctcgtct tgcaagttta gagagggctc taagcacgct        60
     gctcgcggag caatcagttc tgctgagcaa gttttcccag aactcaaaca gtatggttgg       120
     ccagaaagag gctctaaagc cgagttcgat tccctcctcc tccaagccag ccgtttccgg       180
     agaacctcct gtccagagca aaccgagcgt aaatgcgaag tcctcgctga gaagtacccc       240
     aaaagtagag cccaccgttg cttcaggaga gaaaacttct gtcaacgcca gctcctcagg       300
     gaacaaatcg aagcgacgac gacgtcgccg gaaatcaacg acaaagccag ccccggctcc       360
     ccctggtcaa gacttgaaaa gaccaatggt gagctcatct cccgtttcaa agacctctta       420
     attgaggcag tgttgaggcg agttttattg cttgcctcca ctccaaccag tgagatttta       480
     tgcatgtctg cttcagatct cgttagagct aacttagtgg atcctgtgcg attgttcgtc       540
     aagcaggaac cccatacgaa gaagaagctg aatgagcgtc gctttaggct tatttcgtct       600
     gtgtctatag ttgatcagat aatcgagaga ttattgtttg gtcctcagaa caggcttgag       660
     atagccttat ggcatcagat accttccaaa cctggaatgg gactgagcgc tcgtacgcaa       720
     gctgatttgt tgtggaatga gttattcgca aagagcgaga ttgcccctgc ggccgaggct       780
     gacatttcag gatttgactg gtctgtgcag gaatgggagt tatgggccga tctgagcatg       840
     aggatttctt tgtgcgaaga tatgcatgat ggtctacgga ggttgatggt taacagatac       900
     cgctgcttta tgctctcttg cttccaattg tcgaatgggg aattgtatga acaagttgag       960
     cctggactca tgaagtctgg ttcctactgc acttcctctt ccaactccag aatcaggtgc      1020
     ctaatgggct atctaattgg agccccctgg ataatagcca tgggggatga ttctgttgag      1080
     ggttatgtga gagacgcgaa gggcaagtat gaggaattag gacacacttg taaggaatac      1140
     gagttgtgtg atgttgattc agacggcgcg ttgagatctg tgaacttttg ttcacatttg      1200
     atttcccgca acaagttttg gctcacaagc tggcctaaaa ccttgtacag gttcctagac      1260
     tctccctctg aaaattttca tgatcttgaa agggaacttg gctcatgtcc caagtgggcc      1320
     aagataaagg attattgttg tcaggtagga ctggtccctg acaaaatata ttgggaagaa      1380
     gatcaccctg ctgactatgt cgaagaaact caccaagaac caggtcaagc agatgataca      1440
     ggcaaccttg ccgaaagagc agacttctgc tcggtcccga cgacggagac gccgaaggtc      1500
     gacgcagcaa gggcagagtt ctacagttat ggccccaatg gctggagctg tgatataccg      1560
     gaagcgaccc atgttaatca atggccgctc tggggttaca gttcgtcatt cggaggtggt      1620
     tttggtagtc caatccggga ctactaa                                          1647
//