ID   HQ680387; SV 1; linear; genomic RNA; STD; VRL; 1647 BP.
XX
AC   HQ680387;
XX
DT   10-MAY-2011 (Rel. 108, Created)
DT   17-APR-2014 (Rel. 120, Last updated, Version 2)
XX
DE   Velvet tobacco mottle virus isolate Cobblers 2000 RNA dependent RNA
DE   polymerase gene, complete cds.
XX
KW   .
XX
OS   Velvet tobacco mottle virus
OC   Viruses; Riboviria; Solemoviridae; Sobemovirus.
XX
RN   [1]
RP   1-1647
RX   DOI; 10.1007/s11262-013-1007-y.
RX   PUBMED; 24233651.
RA   Arthur K., Collins N., Yazarlou A., Randles J.;
RT   "Nucleotide sequence diversity in Velvet tobacco mottle virus: a virus with
RT   a unique Australian pathosystem";
RL   Virus Genes 48(1):168-173(2014).
XX
RN   [2]
RP   1-1647
RA   Arthur K.R., Randles J.W.;
RT   ;
RL   Submitted (02-DEC-2010) to the INSDC.
RL   School of Agriculture, Food and Wine, University of Adelaide, Waite Rd,
RL   Adelaide, SA 5064, Australia
XX
DR   MD5; 2144c41a79fb7cf18c26db27d2357711.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1647
FT                   /organism="Velvet tobacco mottle virus"
FT                   /host="Nicotiana clevelandii"
FT                   /isolate="Cobblers 2000"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Cobblers sandhill"
FT                   /collected_by="John Randles"
FT                   /collection_date="24-Nov-2000"
FT                   /db_xref="taxon:12473"
FT   CDS             1..1647
FT                   /codon_start=1
FT                   /product="RNA dependent RNA polymerase"
FT                   /note="P2b; RdRp"
FT                   /db_xref="GOA:F5B9A5"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:F5B9A5"
FT                   /protein_id="AEE36651.1"
FT                   /translation="MGFNYVGVSSCKFREGSKHAARGAISSAEQVFPELKQYGWPERGS
FT                   KAEFDSLLLQAGRFRRTSCPEQTERKCEVLAEKYPKSRAHRCFRRENFCQRQLLREQIE
FT                   ATTTSPEINDKASPGSPWSRLEKTNGELISRFKDLLIEAVLRRVLLLASTPTSEILCMS
FT                   ASDLVRANLVDPVRLFVKQEPHTKKKLNERRFRLISSVSIVDQIIERLLFGPQNRLEIA
FT                   LWHQIPSKPGMGLSARTQADLLWNELFAKSEIAPAAEADISGFDWSVQEWELWADLSMR
FT                   ISLCEDMHDGLRRLMVNRYRCFMLSCFQLSNGELYEQVEPGLMKSGSYCTSSSNSRIRC
FT                   LMGHLIGAPWIIAMGDDSVEGYVRDAKSKYEELGHTCKEYELCDVDSDGALRSVNFCSH
FT                   LISRNKFWLTSWPKTLYRFLDSPSENFHDLERELGSCPKWAKIKDYCCQVGLVPDKTYW
FT                   EEDHPADYVEETHQEPSQADDTGNLAERADFCSVPTTETSKVDAARAEFYSYGPNGWSC
FT                   DIPEATYANQWPLWGYSSSFGGGFGSPIRDY"
XX
SQ   Sequence 1647 BP; 423 A; 377 C; 430 G; 417 T; 0 other;
     atgggattca actatgttgg agtctcgtct tgcaagttta gagagggctc taagcacgct        60
     gctcgcggag caatcagttc tgctgagcaa gttttcccag aactcaaaca gtatggttgg       120
     ccagaaagag gctctaaagc cgagtttgat tccctcctcc tccaagccgg ccgtttccgg       180
     agaacctcct gtccagagca aaccgagcgt aaatgcgaag tcctcgctga gaagtacccc       240
     aaaagtagag cccaccgttg cttcaggaga gaaaacttct gtcaacgcca gctcctcagg       300
     gaacaaatcg aagcgacgac gacgtcgccg gaaatcaacg acaaagccag ccccggctcc       360
     ccctggtcaa gacttgaaaa gaccaatggt gagctcatct cccgtttcaa agacctctta       420
     attgaggcag tgttgaggcg agttttatta cttgcctcca ctccaaccag tgagattttg       480
     tgcatgtccg cttcagatct cgttagagct aacttagtgg atcctgtgcg attgttcgtc       540
     aagcaggaac cccacacgaa gaagaagctg aatgagcgcc gctttaggct tatctcgtct       600
     gtgtctatag ttgatcagat aatcgagaga ttattgtttg gtcctcagaa caggcttgag       660
     attgccttat ggcatcagat accttccaaa cctggaatgg gattgagcgc tcgtacgcaa       720
     gctgatttgt tgtggaatga gttattcgca aagagcgaga ttgcccctgc ggctgaggct       780
     gacatttcag gatttgactg gtctgtgcag gaatgggagt tatgggccga tctaagcatg       840
     aggatttctt tgtgcgaaga tatgcatgat ggtctgcgga ggttgatggt taacagatac       900
     cgctgcttta tgctctcttg cttccaattg tcgaacgggg aactgtatga acaagttgag       960
     cccggactca tgaagtctgg ctcctactgc acttcctctt ccaactccag aatcaggtgc      1020
     ctaatgggcc atctaatcgg agctccctgg ataatagcca tgggggatga ttctgttgag      1080
     ggttatgtga gagatgcgaa aagcaagtat gaggaattgg gacacacttg taaggaatac      1140
     gagttgtgtg atgttgattc agacggcgcg ttgagatctg tgaacttttg ttcacatttg      1200
     atttcccgca ataagttttg gctcacaagt tggcctaaaa ccttgtacag gttcctagac      1260
     tctccctctg aaaattttca tgatctcgaa agggaacttg gctcatgtcc caagtgggct      1320
     aagataaagg attattgttg tcaggtagga ctggtccctg acaaaacata ttgggaagaa      1380
     gatcaccctg ctgactatgt cgaagaaact caccaagaac caagtcaagc agatgataca      1440
     ggcaaccttg ccgaaagagc agacttctgc tcggtcccga cgacggagac gtcgaaggtc      1500
     gacgcagcaa gggcagagtt ctacagttat ggccccaatg gctggagctg tgatataccg      1560
     gaagcgacct atgctaatca atggccgctc tggggttaca gttcgtcatt cggaggtggt      1620
     tttggtagtc caatccggga ctactaa                                          1647
//