ID   HQ680385; SV 1; linear; genomic RNA; STD; VRL; 1647 BP.
XX
AC   HQ680385;
XX
DT   10-MAY-2011 (Rel. 108, Created)
DT   17-APR-2014 (Rel. 120, Last updated, Version 2)
XX
DE   Velvet tobacco mottle virus isolate 13 Strz RNA dependent RNA polymerase
DE   gene, complete cds.
XX
KW   .
XX
OS   Velvet tobacco mottle virus
OC   Viruses; Riboviria; Solemoviridae; Sobemovirus.
XX
RN   [1]
RP   1-1647
RX   DOI; 10.1007/s11262-013-1007-y.
RX   PUBMED; 24233651.
RA   Arthur K., Collins N., Yazarlou A., Randles J.;
RT   "Nucleotide sequence diversity in Velvet tobacco mottle virus: a virus with
RT   a unique Australian pathosystem";
RL   Virus Genes 48(1):168-173(2014).
XX
RN   [2]
RP   1-1647
RA   Arthur K.R., Randles J.W.;
RT   ;
RL   Submitted (02-DEC-2010) to the INSDC.
RL   School of Agriculture, Food and Wine, University of Adelaide, Waite Rd,
RL   Adelaide, SA 5064, Australia
XX
DR   MD5; e3732a5b220013c742b9547fab3037e9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1647
FT                   /organism="Velvet tobacco mottle virus"
FT                   /host="Nicotiana clevelandii"
FT                   /isolate="13 Strz"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collected_by="John Randles"
FT                   /collection_date="02-Nov-1984"
FT                   /db_xref="taxon:12473"
FT   CDS             1..1647
FT                   /codon_start=1
FT                   /product="RNA dependent RNA polymerase"
FT                   /note="P2b; RdRp"
FT                   /db_xref="GOA:F5B9A3"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:F5B9A3"
FT                   /protein_id="AEE36649.1"
FT                   /translation="MGFNYVGVSSCKFREGSKHAARGAISSAEQVFPELKQYGWPERGS
FT                   KAEFDSLLLQASRFRRTSCPEQTERKCEVLAEKYPKSRAHRCFRRENFCQRQLLREQIE
FT                   ATTTSPEINDKASPGSPWSRLEKTNGELISRFKDLLIEAVLRRVLLLASTPTSEILCMS
FT                   ASDLVRANLVDPVRLFVKQEPHTKKKLNERRFRLISSVSIVDQIIERLLFGPQNRLEIA
FT                   LWHQIPSKPGMGLSARTQADLLWNELFAKSEIAPATEADISGFDWSVQEWELWADLSMR
FT                   ISLCEDMHDGLRRLMVNRYRCFMLSCFQLSNGELYEQVEPGLMKSGSYCTSSSNSRIRC
FT                   LMGHLIGAPWIIAMGDDSVEGYVRDAKSKYEELGHTCKEYELCDVDSDGVLRSVNFCSH
FT                   LISRNKFWLTSWPKTLYRFLDSPSENFHDLERELGSCPKWAKIKDYCCQVGLVPDKTYW
FT                   EEDHPADYVEETHQEPSQADDTGNLAERADLCSVPTTETPKVDAARAEFYSYGPNGWSC
FT                   DIPEATYVNQWPLWGYSSSFGGGSGSPIRDY"
XX
SQ   Sequence 1647 BP; 430 A; 375 C; 425 G; 417 T; 0 other;
     atgggattca actatgttgg agtctcgtct tgcaagttta gagagggctc taagcacgct        60
     gctcgcggag caatcagttc tgctgagcaa gttttcccag aactcaagca gtatggttgg       120
     ccagaaagag gctctaaagc cgaattcgat tccctcctcc tccaagccag ccgcttccgg       180
     agaacctcct gtccagagca aaccgagcgt aaatgcgaag tcctcgccga gaagtacccc       240
     aaaagtagag cccaccgctg tttcaggaga gaaaacttct gtcaacgcca gctcctcagg       300
     gaacaaatcg aagcgacgac gacgtcgccg gaaatcaacg acaaagccag ccccggctcc       360
     ccctggtcaa gacttgaaaa gaccaatggc gagctcatct cccgtttcaa agacctctta       420
     attgaggcag tgttgaggcg agttttattg cttgcctcca ctccaaccag tgagattttg       480
     tgcatgtctg cttcagatct cgttagagct aacttagtgg atcctgtgcg attgtttgtc       540
     aagcaggaac cccacacaaa gaagaagctg aatgagcgcc gctttaggct tatttcgtct       600
     gtgtctatag ttgatcagat aattgagaga ttattgtttg gtcctcagaa caggcttgag       660
     attgccttat ggcatcagat accttccaaa ccaggaatgg gactgagcgc tcgtacgcaa       720
     gctgatttgt tgtggaatga gctattcgca aagagcgaga ttgcccccgc gaccgaggct       780
     gacatttcag gatttgactg gtctgtgcag gaatgggagt tatgggccga tctaagcatg       840
     aggatttctt tgtgcgaaga tatgcatgat ggtctacgga ggttgatggt caatagatat       900
     cgatgcttta tgctctcttg cttccaattg tcgaatgggg aattatatga acaagttgag       960
     cctggactca tgaagtctgg ctcctactgt acttcctcct ccaactccag aatcaggtgc      1020
     ctaatgggcc acttaattgg ggctccctgg ataatagcta tgggagatga ttctgttgag      1080
     ggttatgtga gagatgcgaa aagcaagtat gaggaattag gacacacttg taaggaatac      1140
     gagttgtgtg atgtcgattc agacggcgtg ttgagatctg tgaacttttg ttcacatttg      1200
     atttcccgca ataagttttg gctcacaagt tggcctaaaa ccttgtatag gttcttagac      1260
     tctccctctg aaaactttca tgatcttgaa agggaacttg gctcatgtcc caagtgggcc      1320
     aagataaagg attattgttg tcaggtagga ctggtccctg acaaaacata ttgggaagaa      1380
     gatcaccctg ctgactatgt cgaagaaact caccaagaac caagtcaagc agatgataca      1440
     ggcaaccttg ccgaaagagc agacctctgc tcggtcccga cgacggagac gccgaaggtc      1500
     gacgcagcaa gggcagagtt ctacagttat ggccccaatg gctggagctg tgatataccg      1560
     gaagcgacct atgttaatca atggccgctc tggggttaca gttcgtcatt cggaggtggt      1620
     tctggtagtc caatccggga ctactaa                                          1647
//