ID HQ670665; SV 1; linear; genomic RNA; STD; VRL; 3441 BP. XX AC HQ670665; XX DT 27-JUN-2011 (Rel. 109, Created) DT 27-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Rice black streaked dwarf virus isolate Korean ORF3 gene, complete cds. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3441 RA Wang Y., Choi J.Y., Roh J.Y., Je Y.H.; RT ; RL Submitted (02-DEC-2010) to the INSDC. RL Department of Agriculture Biotechnology, College of Agriculture and Life RL Sciences, Seoul National University, 599 Gwanakno, Gwanak-gu, Seoul RL 151-742, Korea XX DR MD5; 6dae03b99726088efeb6e2ca6f714ad3. XX FH Key Location/Qualifiers FH FT source 1..3441 FT /organism="Rice black streaked dwarf virus" FT /host="Oryza sativa L." FT /isolate="Korean" FT /mol_type="genomic RNA" FT /country="South Korea" FT /db_xref="taxon:10990" FT CDS 1..3441 FT /codon_start=1 FT /product="ORF3" FT /db_xref="UniProtKB/TrEMBL:F8SRK7" FT /protein_id="AEI60136.1" FT /translation="MLKVNVQALIYPFSGQITDIRRNQLVPTAKFKHTVLHQPIFITKL FT KNKTSPPDPSKSKNTLKVNPVWSNAFFDWNSALINPWTVLPSSTGSGSMSIPSSKSVNS FT DNAVLKNAEFINERLPSYIKLLFDSLDLKGNGYVNQFGFWALLYLDYSLHCLVPLEYYR FT QMLNLRTKENVVFLDTYNEVDYAISYLSRFPKLLYVNGHGRKFIKLPSFGKLGFTFEKD FT NIVGNIGNDLQYWTLWPLHNDYTQADTNRPNHANILRNLGHFDNELVSIHYYPTFFYEH FT YLYFETVQELMKHQIYNVIRTYRAQLKLQDNLGTNRLERRGYYLTAYSPFYESFTDAVV FT AEFGELYLYLQLFGSLPFTSGNLNVIPNTYSQFDLYYHQRFGHLKEFGKLTFENLTERY FT RRNNLKPFQLFFVYEQMYQLMQTISPSLNLNPNLELVDFEEYGDGANLEDFDINDVSAC FT RLIDYPLGDALPLNTLEVFPPNLFEVSEHIRMMFDSRFLSPYAMYPLPLVPGGHDSLIQ FT TDASRLSDFRKNTAQRKVFKALQKQVLNSKIVFRKYVEPNLIKSSIPSADFLFWVIYCV FT ASPPKFTVSSQGDLDVPPITSDISNLIYTSPNTSSFKLLSLFFQFLHEKTFLQLNQPMS FT IVFLGAKSEPVANMLFNLSHGKWSVQRFGNDAEWPGKKANVLSINLKNVYDIVISDMDQ FT SIGANVNSITANTLKQLRVCLEAFSKRMIFKLQYCLFHTLSSITAMLREYSAEIAHSGQ FT FIKLKIIRHAWSKVGSLEVFLIIDKVRTEETIPNDNELMKVVNTLGLSEPNQVFFTYMG FT TPRRYTLNDLNCKIFSVDITSEEMTNICSIFLNLSQCVSYGSSLYDKEHLNLTFFGTTN FT IQRIGLFMRNKQIYKALAITGNDHKPEGVFTPSTDFVISGVREVLVLADAQRMVGWKML FT KALHFDKGALDLNLTAYDIGCRDYECAYMTVMDENTIIRYVGYDRASVLDVKRGITVVK FT AEVNREKLIELCGLGHVFAFNSYYMGFESRDELEQELNYIADHLVIKGFFFISFYAMHD FT DLKPILRHHGFIDITSADVAANKFTFGRYHAVATVSIDFVEEWKRKMMNKYDIYQIFLS FT ANDVSFSCIMHGYAVNLDSMYFAPIYNLVSPCFLIHPKK" XX SQ Sequence 3441 BP; 1083 A; 548 C; 605 G; 1205 T; 0 other; atgttgaaag taaacgtgca ggctctcatc tatcctttca gtggacaaat cacagacatt 60 cgaagaaatc aactcgttcc aacagccaaa ttcaaacata ctgtcttaca tcaaccaatt 120 tttatcacta aattaaagaa caaaacgtca ccacccgacc cctcaaaatc caaaaatact 180 ttaaaggtaa atccagtatg gtcaaatgct ttttttgatt ggaattcagc tttaatcaac 240 ccatggacag ttcttccctc ttcaaccggc tctggctcaa tgtcaatacc atcttctaaa 300 agtgtgaact ctgataatgc tgttttaaag aatgcagaat tcattaacga aagacttcct 360 tcatatataa agttgctttt tgatagtctc gatcttaaag gtaatggtta tgttaatcaa 420 tttggttttt gggcattatt atatttagat tacagtctac attgtcttgt tccccttgag 480 tattatcggc aaatgttaaa tttaagaacc aaagaaaatg tggtattttt agatacttat 540 aatgaagttg attatgctat ttcctacctc tcacgctttc ccaaattatt gtatgttaat 600 ggtcatggac gaaaatttat taaactgcca agcttcggaa aattaggatt tacttttgaa 660 aaagacaata tcgttggaaa tataggtaat gatttacaat attggacgtt gtggccctta 720 cataatgatt atactcaagc agatacaaat cgtcccaatc atgctaatat tcttagaaac 780 ttaggtcatt ttgacaatga gttagttagt attcattatt atcctacttt tttctacgaa 840 cattatttgt attttgaaac agtgcaagaa ttgatgaaac atcaaattta taatgttatt 900 cgaacttatc gtgctcagtt aaagttgcaa gacaatcttg gtactaatcg attggaaaga 960 agaggttatt atctaacagc gtatagtccc ttttatgaat catttactga tgcagtagtc 1020 gcagagttcg gagaattgta tttgtatctt cagttgtttg gatcactacc cttcactagc 1080 ggtaatttaa atgtcattcc caacacttac tctcagtttg acctttatta tcatcaaaga 1140 ttcggacatt taaaagaatt cggaaagttg acatttgaaa atttaactga aagataccgt 1200 cgtaataatt tgaaaccttt tcaattattt tttgtttatg agcaaatgta tcagttgatg 1260 caaactattt caccaagctt gaatctcaac cccaatcttg aactagtgga ttttgaagaa 1320 tacggtgatg gagctaattt agaagatttt gacattaacg atgttagtgc atgtcgattg 1380 atagattatc ctttgggtga tgctttacca ttaaatacgt tagaagtgtt tcctcccaat 1440 ttgtttgaag tttcagaaca tataagaatg atgtttgata gcagattttt aagtccatat 1500 gctatgtatc ccttaccttt ggttcctggt ggtcacgatt ccttaattca aaccgatgca 1560 agtaggttat ctgattttcg aaagaacact gctcaacgta aagtatttaa agcattgcaa 1620 aaacaagtgt tgaattctaa aattgttttt agaaaatatg tcgaacctaa tctgattaaa 1680 agttccattc cctcagcaga ttttcttttt tgggttattt attgtgtagc ttctcctcct 1740 aaattcacag tcagctcaca aggtgatctg gatgtgcctc ctattacttc agacatttca 1800 aacttgattt acacttcgcc taacacttca tcttttaaat tgttgagtct tttcttccag 1860 tttcttcatg agaagacttt tcttcaactc aatcaaccaa tgagcatagt ttttcttgga 1920 gcgaaaagtg aaccagtggc aaacatgtta ttcaacttgt ctcacggtaa atggagtgta 1980 caacgttttg gcaatgatgc agaatggcct ggtaagaaag caaatgttct atccatcaat 2040 ttgaaaaatg tttacgatat agtcatttca gatatggatc aaagcattgg agcgaatgtt 2100 aatagtataa cggctaacac cttaaaacag ttaagagtat gtttagaagc gtttagtaag 2160 agaatgattt ttaagttaca atattgttta tttcatactt taagttcaat aactgccatg 2220 ttacgcgaat atagtgctga gattgctcat tcaggtcaat tcattaaact aaaaattatt 2280 cgtcatgctt ggtcaaaggt tggtagctta gaagtgtttt taattattga taaagtgcga 2340 actgaagaga ctattcctaa tgataatgaa ttaatgaagg ttgtaaacac tctaggattg 2400 agcgaaccga accaggtgtt tttcacttat atgggtactc ctcgaagata tactttgaat 2460 gacttaaatt gtaagatttt tagcgtcgat atcacttccg aagagatgac taatatctgt 2520 tccattttct taaatttatc tcaatgtgtt agttatggtt cttcgttgta tgataaagaa 2580 catttaaatt tgacattttt tggcaccacg aatattcaaa gaattggtct tttcatgcgt 2640 aataagcaaa tctacaaagc gttagctatt actggtaatg atcataaacc cgaaggagtt 2700 ttcaccccta gtactgattt tgtgatatcc ggagttagag aagttttagt tttagcagac 2760 gcgcaacgta tggtaggttg gaaaatgttg aaagcattac atttcgataa aggtgctctt 2820 gatttgaatt taaccgctta tgatattgga tgtcgcgatt atgaatgtgc ttacatgaca 2880 gttatggatg aaaatacaat aatacgttat gttggatatg atagagcttc agtgttagac 2940 gtaaaacgag gtattacagt agtgaaagcg gaggttaata gggaaaaatt gattgaatta 3000 tgcggtttag gtcatgtatt tgcttttaat tcttattata tgggatttga gtcaagagat 3060 gaacttgaac aggaattgaa ttatatcgct gatcatttag ttataaaagg cttctttttc 3120 attagttttt acgctatgca cgatgactta aaaccaatct taagacacca tggattcatt 3180 gatattacta gtgctgacgt tgctgctaat aaatttactt ttggaaggta tcatgctgtc 3240 gctacagtaa gcattgattt cgttgaagaa tggaaaagga aaatgatgaa caaatacgat 3300 atttatcaaa tatttttatc tgctaatgat gtcagtttca gttgtatcat gcatggttat 3360 gctgttaatc tggatagtat gtatttcgcc cctatttaca atcttgtgtc tccttgtttc 3420 ctaattcacc caaagaaatg a 3441 //